Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro06670 Vaccinium macrocarpon HOM05D001226 ORTHO05D427097 3.4e-55 218.0 105 100.0
vmacro06669 Vaccinium macrocarpon HOM05D001226 ORTHO05D001078 2.0e-15 85.9 88 52.3
Rhsim03G0186900 Rhododendron simsii HOM05D001226 ORTHO05D001078 7.7e-15 84.0 50 76.0
Rhsim03G0186800 Rhododendron simsii HOM05D001226 ORTHO05D001078 2.9e-14 82.0 90 48.9
Actinidia32852 Actinidia chinensis HOM05D001226 ORTHO05D001078 5.0e-14 81.3 50 70.0
Dinv28431 Davidia involucrata HOM05D001226 ORTHO05D001078 8.8e-11 70.5 93 47.3
Dinv35218 Davidia involucrata HOM05D001226 ORTHO05D001078 1.2e-10 70.1 52 67.3
TAR374G0370 Trochodendron aralioides HOM05D001226 ORTHO05D001078 2.6e-10 68.9 50 64.0
TAR374G0448 Trochodendron aralioides HOM05D001226 ORTHO05D001078 2.6e-10 68.9 50 64.0
CSS0020969 Camellia sinensis var. sinensis HOM05D001226 ORTHO05D001078 3.4e-10 68.6 49 65.3
CSS0044309 Camellia sinensis var. sinensis HOM05D001226 ORTHO05D001078 3.4e-10 68.6 49 65.3
Nitab4.5_0003242g0030 Nicotiana tabacum HOM05D001226 ORTHO05D001078 3.4e-10 68.6 101 39.6
Oeu022594.1 Olea europaea HOM05D001226 ORTHO05D001078 4.4e-10 68.2 91 41.8
Cfa022984 Carpinus fangiana HOM05D001226 ORTHO05D001078 5.7e-10 67.8 60 58.3
TAR375G0414 Trochodendron aralioides HOM05D001226 ORTHO05D001078 2.2e-09 65.9 50 60.0
Cfa022982 Carpinus fangiana HOM05D001226 ORTHO05D001078 3.7e-09 65.1 48 66.7
CiPaw.04G071600 Carya illinoinensis HOM05D001226 ORTHO05D001078 6.3e-09 64.3 53 58.5
Lalb_Chr19g0130781 Lupinus albus HOM05D001226 ORTHO05D001078 6.3e-09 64.3 47 68.1
GSVIVG01028938001 Vitis vinifera HOM05D001226 ORTHO05D001078 1.1e-08 63.5 53 60.4
Glyma.20G159400 Glycine max HOM05D001226 ORTHO05D001078 1.8e-08 62.8 49 61.2
Psat6g197800 Pisum sativum HOM05D001226 ORTHO05D001078 1.8e-08 62.8 46 63.0
Atru.chr1.446 Acer truncatum HOM05D001226 ORTHO05D001078 2.4e-08 62.4 93 41.9
Psat6g197680 Pisum sativum HOM05D001226 ORTHO05D001078 2.4e-08 62.4 46 63.0
GSVIVG01028935001 Vitis vinifera HOM05D001226 ORTHO05D001078 2.4e-08 62.4 51 60.8
Medtr1g101120 Medicago truncatula HOM05D001226 ORTHO05D001078 4.1e-08 61.6 47 61.7
Glyma.10G235000 Glycine max HOM05D001226 ORTHO05D001078 5.4e-08 61.2 49 59.2
Manes.06G148000 Manihot esculenta HOM05D001226 ORTHO05D001078 5.4e-08 61.2 53 60.4
Hund04755 Selenicereus undatus HOM05D001226 ORTHO05D001078 5.4e-08 61.2 47 61.7
Lj5g0011608 Lotus japonicus HOM05D001226 ORTHO05D001078 7.0e-08 60.8 47 61.7
ClCG05G008080 Citrullus lanatus HOM05D001226 ORTHO05D001078 9.2e-08 60.5 58 53.4
MELO3C006914.2 Cucumis melo HOM05D001226 ORTHO05D001078 9.2e-08 60.5 58 53.4
Psat6g197760 Pisum sativum HOM05D001226 ORTHO05D001078 9.2e-08 60.5 43 67.4
QL09p013967 Quercus lobata HOM05D001226 ORTHO05D001078 9.2e-08 60.5 65 50.8
Atru.chr1.444 Acer truncatum HOM05D001226 ORTHO05D001078 1.2e-07 60.1 93 40.9
HanXRQChr10g0292951 Helianthus annuus HOM05D001226 ORTHO05D001078 1.2e-07 60.1 55 52.7
GSVIVG01028936001 Vitis vinifera HOM05D001226 ORTHO05D001078 1.2e-07 60.1 53 58.5
Phvul.007G071100 Phaseolus vulgaris HOM05D001226 ORTHO05D001078 2.0e-07 59.3 49 57.1
CsaV3_3G017150 Cucumis sativus L. HOM05D001226 ORTHO05D001078 2.7e-07 58.9 58 51.7
Psat6g197720 Pisum sativum HOM05D001226 ORTHO05D001078 2.7e-07 58.9 46 58.7
PGR142G2740 Punica granatum HOM05D001226 ORTHO05D001078 2.7e-07 58.9 58 51.7
Migut.F00333 Erythranthe guttata HOM05D001226 ORTHO05D001078 3.5e-07 58.5 57 56.1
HanXRQChr07g0206991 Helianthus annuus HOM05D001226 ORTHO05D001078 3.5e-07 58.5 53 50.9
TPR.G23945 Trifolium pratense HOM05D001226 ORTHO05D001078 3.5e-07 58.5 47 59.6
Prupe.2G295300 Prunus persica HOM05D001226 ORTHO05D001078 4.5e-07 58.2 81 39.5
RcHm_v2.0_Chr1g0377551 Rosa chinensis HOM05D001226 ORTHO05D001078 4.5e-07 58.2 75 42.7
VMungo0285G0001 Vigna mungo HOM05D001226 ORTHO05D001078 4.5e-07 58.2 54 53.7
EL10Ac3g05624 Beta vulgaris HOM05D001226 ORTHO05D001078 5.9e-07 57.8 60 51.7
Lj3A79T14 Lonicera japonica HOM05D001226 ORTHO05D001078 5.9e-07 57.8 75 41.3
Thecc.03G178100 Theobroma cacao HOM05D001226 ORTHO05D001078 5.9e-07 57.8 75 44.0
Duzib068G0195 Durio zibethinus HOM05D001226 ORTHO05D001078 7.7e-07 57.4 35 71.4
Lj1A998T46 Lonicera japonica HOM05D001226 ORTHO05D001078 7.7e-07 57.4 75 41.3
Lj3A77T31 Lonicera japonica HOM05D001226 ORTHO05D001078 7.7e-07 57.4 75 41.3
Sed0005792 Sechium edule HOM05D001226 ORTHO05D001078 7.7e-07 57.4 87 41.4
Sed0018749 Sechium edule HOM05D001226 ORTHO05D001078 7.7e-07 57.4 87 41.4
Nn1g01493 Nelumbo nucifera HOM05D001226 ORTHO05D001078 1.0e-06 57.0 49 53.1
Sc19g0001460 Simmondsia chinensis HOM05D001226 ORTHO05D001078 1.0e-06 57.0 50 56.0
COL.COLO4_14324 Corchorus olitorius HOM05D001226 ORTHO05D001078 1.3e-06 56.6 35 71.4
PGSC0003DMG400030006 Solanum tuberosum HOM05D001226 ORTHO05D001078 1.3e-06 56.6 51 51.0
TPR.G21307 Trifolium pratense HOM05D001226 ORTHO05D001078 1.3e-06 56.6 53 54.7
AUR62021174 Chenopodium quinoa HOM05D001226 ORTHO05D001078 1.7e-06 56.2 35 71.4
Ciclev10005988m.g Citrus clementina HOM05D001226 ORTHO05D001078 1.7e-06 56.2 50 54.0
FAN03G2126 Fragaria x ananassa HOM05D001226 ORTHO05D001078 1.7e-06 56.2 75 41.3
Gorai.006G198100 Gossypium raimondii HOM05D001226 ORTHO05D001078 1.7e-06 56.2 35 71.4
arahy.Tifrunner.gnm1.ann1.05NU8P Arachis hypogaea HOM05D001226 ORTHO05D001078 2.3e-06 55.8 43 65.1
arahy.Tifrunner.gnm1.ann1.KECW5Q Arachis hypogaea HOM05D001226 ORTHO05D001078 2.3e-06 55.8 43 65.1
arahy.Tifrunner.gnm1.ann1.Y30FFD Arachis hypogaea HOM05D001226 ORTHO05D001078 2.3e-06 55.8 43 65.1
Oeu004096.1 Olea europaea HOM05D001226 ORTHO05D001078 2.3e-06 55.8 91 38.5
Atru.chr1.443 Acer truncatum HOM05D001226 ORTHO05D001078 2.9e-06 55.5 75 41.3
EL10Ac3g05625 Beta vulgaris HOM05D001226 ORTHO05D001078 2.9e-06 55.5 60 53.3
FAN01G1862 Fragaria x ananassa HOM05D001226 ORTHO05D001078 2.9e-06 55.5 75 41.3
FAN10G1273 Fragaria x ananassa HOM05D001226 ORTHO05D001078 2.9e-06 55.5 75 41.3
FAN10G1737 Fragaria x ananassa HOM05D001226 ORTHO05D001078 2.9e-06 55.5 75 41.3
Medtr6g452730 Medicago truncatula HOM05D001226 ORTHO05D001078 2.9e-06 55.5 46 58.7
FvH4_7g29560 Fragaria vesca HOM05D001226 ORTHO05D001078 3.8e-06 55.1 75 41.3
FAN06G0317 Fragaria x ananassa HOM05D001226 ORTHO05D001078 3.8e-06 55.1 75 41.3
FAN06G1455 Fragaria x ananassa HOM05D001226 ORTHO05D001078 3.8e-06 55.1 75 41.3
Gohir.A12G257100 Gossypium hirsutum HOM05D001226 ORTHO05D001078 3.8e-06 55.1 51 54.9
Manes.14G025400 Manihot esculenta HOM05D001226 ORTHO05D001078 3.8e-06 55.1 93 38.7
Peaxi162Scf00234g00910 Petunia axillaris HOM05D001226 ORTHO05D001078 3.8e-06 55.1 54 51.9
Potri.012G141800 Populus trichocarpa HOM05D001226 ORTHO05D001078 3.8e-06 55.1 48 62.5
Ah.07g207060 Amaranthus hybridus HOM05D001226 ORTHO05D001078 5.0e-06 54.7 49 55.1
Lj3A78T15 Lonicera japonica HOM05D001226 ORTHO05D001078 5.0e-06 54.7 75 40.0
Lj3C80T4 Lonicera japonica HOM05D001226 ORTHO05D001078 5.0e-06 54.7 75 40.0
Sabra12G0106600 Salix brachista HOM05D001226 ORTHO05D001078 5.0e-06 54.7 46 63.0
DCAR_010303 Daucus carota HOM05D001226 ORTHO05D001078 6.6e-06 54.3 35 65.7
Lj3C76T0 Lonicera japonica HOM05D001226 ORTHO05D001078 6.6e-06 54.3 75 40.0
CANSAT21G1407 Cannabis sativa HOM05D001226 ORTHO05D001078 8.6e-06 53.9 94 38.3
Eucgr.K00265 Eucalyptus grandis HOM05D001226 ORTHO05D001078 8.6e-06 53.9 62 51.6
Eucgr.K00266 Eucalyptus grandis HOM05D001226 ORTHO05D001078 8.6e-06 53.9 62 51.6
Eucgr.K00267 Eucalyptus grandis HOM05D001226 ORTHO05D001078 8.6e-06 53.9 62 51.6
Eucgr.K00268 Eucalyptus grandis HOM05D001226 ORTHO05D001078 8.6e-06 53.9 62 51.6
Gohir.D12G258400 Gossypium hirsutum HOM05D001226 ORTHO05D001078 8.6e-06 53.9 37 62.2
Gorai.008G276800 Gossypium raimondii HOM05D001226 ORTHO05D001078 8.6e-06 53.9 37 62.2
MBI18_g40940_MAGBIO Magnolia biondii HOM05D001226 ORTHO05D001078 8.6e-06 53.9 55 58.2
Phvul.004G114400 Phaseolus vulgaris HOM05D001226 ORTHO05D001078 8.6e-06 53.9 60 48.3


User provided reference genes

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