Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro06639 Vaccinium macrocarpon HOM05D006494 ORTHO05D007787 8.1e-143 510.4 253 100.0
Actinidia20864 Actinidia chinensis HOM05D006494 ORTHO05D007787 2.2e-68 263.1 232 62.9
Actinidia34147 Actinidia chinensis HOM05D006494 ORTHO05D007787 8.8e-65 251.1 225 64.9
Dinv28397 Davidia involucrata HOM05D006494 ORTHO05D007787 1.4e-62 243.8 242 58.3
Rhsim09G0199800 Rhododendron simsii HOM05D006494 ORTHO05D007787 3.5e-61 239.2 222 60.4
Rhsim09G0200100 Rhododendron simsii HOM05D006494 ORTHO05D007787 7.7e-61 238.0 222 59.9
vmacro09820 Vaccinium macrocarpon HOM05D006494 ORTHO05D007787 6.5e-60 235.0 243 55.6
Rhsim03G0190000 Rhododendron simsii HOM05D006494 ORTHO05D007787 1.9e-51 206.8 135 78.5
CSS0049923 Camellia sinensis var. sinensis HOM05D006494 ORTHO05D007787 4.2e-51 205.7 195 61.0
Actinidia08572 Actinidia chinensis HOM05D006494 ORTHO05D007787 6.8e-49 198.4 165 64.8
Hma1.2p1_0327F.1_g126290 Hydrangea macrophylla HOM05D006494 ORTHO05D007787 3.4e-48 196.1 229 55.0
Actinidia31832 Actinidia chinensis HOM05D006494 ORTHO05D007787 1.9e-43 180.3 176 60.2
QL09p013118 Quercus lobata HOM05D006494 ORTHO05D007787 2.3e-41 173.3 249 44.6
Cfa016278 Carpinus fangiana HOM05D006494 ORTHO05D007787 6.4e-39 165.2 254 42.9
PGSC0003DMG400010122 Solanum tuberosum HOM05D006494 ORTHO05D007787 1.2e-37 161.0 255 46.3
Sopen03g004010 Solanum pennellii HOM05D006494 ORTHO05D007787 3.5e-37 159.5 258 44.2
Haze_00032 Corylus avellana HOM05D006494 ORTHO05D007787 1.0e-36 157.9 255 42.7
CSS0030697 Camellia sinensis var. sinensis HOM05D006494 ORTHO05D007787 6.6e-36 155.2 132 66.7
Thecc.04G169800 Theobroma cacao HOM05D006494 ORTHO05D007787 1.5e-35 154.1 241 42.7
TWI23G1164 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 5.6e-35 152.1 241 42.3
TWI39G0535 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 2.1e-34 150.2 244 42.2
Cc02_g02520 Coffea canephora HOM05D006494 ORTHO05D007787 4.7e-34 149.1 253 41.1
Manes.06G151500 Manihot esculenta HOM05D006494 ORTHO05D007787 5.2e-33 145.6 224 45.1
DCAR_020265 Daucus carota HOM05D006494 ORTHO05D007787 2.0e-32 143.7 247 45.3
Ciclev10005709m.g Citrus clementina HOM05D006494 ORTHO05D007787 5.8e-32 142.1 225 43.6
PGR142G1234 Punica granatum HOM05D006494 ORTHO05D007787 7.5e-32 141.7 258 40.7
Solyc03g025160.4 Solanum lycopersicum HOM05D006494 ORTHO05D007787 7.5e-32 141.7 186 47.3
Nitab4.5_0000084g0320 Nicotiana tabacum HOM05D006494 ORTHO05D007787 2.9e-31 139.8 230 44.8
Duzib268G1872 Durio zibethinus HOM05D006494 ORTHO05D007787 3.7e-31 139.4 241 39.8
Actinidia03131 Actinidia chinensis HOM05D006494 ORTHO05D007787 4.1e-30 136.0 111 64.0
TAR629G2733 Trochodendron aralioides HOM05D006494 ORTHO05D007787 4.1e-30 136.0 243 40.7
Eucgr.K00289 Eucalyptus grandis HOM05D006494 ORTHO05D007787 9.2e-30 134.8 246 39.4
Duzib151G1204 Durio zibethinus HOM05D006494 ORTHO05D007787 1.0e-28 131.3 241 39.0
Manes.14G023400 Manihot esculenta HOM05D006494 ORTHO05D007787 1.7e-28 130.6 224 43.8
Gohir.A02G091800 Gossypium hirsutum HOM05D006494 ORTHO05D007787 3.9e-28 129.4 242 38.4
SalBow2G1868 Salvia bowleyana HOM05D006494 ORTHO05D007787 1.1e-27 127.9 228 43.0
SalBow2G2185 Salvia bowleyana HOM05D006494 ORTHO05D007787 1.1e-27 127.9 228 43.0
Cpa.g.sc107.95 Carica papaya HOM05D006494 ORTHO05D007787 1.5e-27 127.5 228 41.7
CiPaw.05G263300 Carya illinoinensis HOM05D006494 ORTHO05D007787 1.5e-27 127.5 210 44.3
Gorai.011G137900 Gossypium raimondii HOM05D006494 ORTHO05D007787 1.9e-27 127.1 220 42.3
Gohir.D10G124800 Gossypium hirsutum HOM05D006494 ORTHO05D007787 2.5e-27 126.7 220 42.3
Gorai.005G124800 Gossypium raimondii HOM05D006494 ORTHO05D007787 2.5e-27 126.7 241 37.8
PGSC0003DMG400029922 Solanum tuberosum HOM05D006494 ORTHO05D007787 2.5e-27 126.7 229 44.1
TWI39G0536 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 2.5e-27 126.7 218 39.9
MSTRG.8473 Avicennia marina HOM05D006494 ORTHO05D007787 5.6e-27 125.6 229 41.0
Gohir.D02G108900 Gossypium hirsutum HOM05D006494 ORTHO05D007787 7.3e-27 125.2 241 37.8
Migut.F01093 Erythranthe guttata HOM05D006494 ORTHO05D007787 1.6e-26 124.0 224 41.5
Gohir.A10G141700 Gossypium hirsutum HOM05D006494 ORTHO05D007787 1.6e-26 124.0 220 41.8
ECA232G4003 Erigeron canadensis HOM05D006494 ORTHO05D007787 6.2e-26 122.1 236 39.8
Prupe.7G058200 Prunus persica HOM05D006494 ORTHO05D007787 8.1e-26 121.7 219 39.3
Nn6g33336 Nelumbo nucifera HOM05D006494 ORTHO05D007787 1.8e-25 120.6 229 41.5
SGA_v2.0_scaffold10G05304 Striga asiatica HOM05D006494 ORTHO05D007787 4.0e-25 119.4 223 42.2
HanXRQChr09g0252471 Helianthus annuus HOM05D006494 ORTHO05D007787 9.9e-24 114.8 219 39.3
Peaxi162Scf00444g00014 Petunia axillaris HOM05D006494 ORTHO05D007787 3.7e-23 112.8 230 39.1
ECA232G1863 Erigeron canadensis HOM05D006494 ORTHO05D007787 1.1e-22 111.3 231 38.1
Migut.F00309 Erythranthe guttata HOM05D006494 ORTHO05D007787 1.4e-22 110.9 233 38.2
Nitab4.5_0000572g0070 Nicotiana tabacum HOM05D006494 ORTHO05D007787 5.4e-22 109.0 229 39.3
Ciclev10030388m.g Citrus clementina HOM05D006494 ORTHO05D007787 1.2e-21 107.8 237 37.6
Thecc.03G182400 Theobroma cacao HOM05D006494 ORTHO05D007787 4.6e-21 105.9 250 34.4
Oeu022606.1 Olea europaea HOM05D006494 ORTHO05D007787 6.0e-21 105.5 233 38.2
Oeu006795.1 Olea europaea HOM05D006494 ORTHO05D007787 1.0e-20 104.8 229 39.7
COL.COLO4_28030 Corchorus olitorius HOM05D006494 ORTHO05D007787 1.7e-20 104.0 240 35.4
MD12G1079700 Malus domestica HOM05D006494 ORTHO05D007787 3.9e-20 102.8 228 36.0
RcHm_v2.0_Chr3g0482771 Rosa chinensis HOM05D006494 ORTHO05D007787 2.8e-18 96.7 223 36.3
MD07G1041300 Malus domestica HOM05D006494 ORTHO05D007787 1.4e-17 94.4 223 35.4
Lj5g0022841 Lotus japonicus HOM05D006494 ORTHO05D007787 2.4e-17 93.6 219 34.7
MD14G1075900 Malus domestica HOM05D006494 ORTHO05D007787 1.5e-16 90.9 227 34.8
COL.COLO4_10079 Corchorus olitorius HOM05D006494 ORTHO05D007787 2.0e-16 90.5 222 36.0
Lsat_1_v5_gn_9_57501 Lactuca sativa HOM05D006494 ORTHO05D007787 2.6e-16 90.1 227 33.5
unitig_46.g18800 Utricularia gibba HOM05D006494 ORTHO05D007787 2.6e-16 90.1 202 38.1
VMungo0720G0554 Vigna mungo HOM05D006494 ORTHO05D007787 3.4e-16 89.7 225 32.4
CsaV3_3G017370 Cucumis sativus L. HOM05D006494 ORTHO05D007787 9.9e-16 88.2 228 33.8
Peaxi162Scf00618g00753 Petunia axillaris HOM05D006494 ORTHO05D007787 1.3e-15 87.8 267 32.6
Phvul.007G073600 Phaseolus vulgaris HOM05D006494 ORTHO05D007787 2.2e-15 87.0 229 32.8
Potri.017G113501 Populus trichocarpa HOM05D006494 ORTHO05D007787 2.2e-15 87.0 173 37.6
Ca_10732_v3 Cicer arietinum L. HOM05D006494 ORTHO05D007787 1.1e-14 84.7 221 31.2
PSO478G4343 Papaver somniferum HOM05D006494 ORTHO05D007787 2.4e-14 83.6 232 31.0
MELO3C018639.2 Cucumis melo HOM05D006494 ORTHO05D007787 3.2e-14 83.2 229 34.1
Sabra04G0078700 Salix brachista HOM05D006494 ORTHO05D007787 3.2e-14 83.2 175 36.6
CiPaw.12G091000 Carya illinoinensis HOM05D006494 ORTHO05D007787 7.1e-14 82.0 228 32.9
ClCG05G008270 Citrullus lanatus HOM05D006494 ORTHO05D007787 7.1e-14 82.0 244 32.8
Glyma.20G162200 Glycine max HOM05D006494 ORTHO05D007787 1.2e-13 81.3 229 32.8
Lalb_Chr21g0305211 Lupinus albus HOM05D006494 ORTHO05D007787 1.6e-13 80.9 242 30.6
RcHm_v2.0_Chr3g0482351 Rosa chinensis HOM05D006494 ORTHO05D007787 3.5e-13 79.7 247 34.0
SHI13763 Sapria himalayana HOM05D000481 ORTHO05D003804 7.8e-13 78.6 201 34.3
TPR.G26961 Trifolium pratense HOM05D006494 ORTHO05D007787 1.0e-12 78.2 183 34.4
PGSC0003DMG400017033 Solanum tuberosum HOM05D006494 ORTHO05D007787 1.7e-12 77.4 109 49.5
arahy.Tifrunner.gnm1.ann1.HAQV4X Arachis hypogaea HOM05D006494 ORTHO05D007787 5.1e-12 75.9 218 32.6
Prupe.7G043900 Prunus persica HOM05D006494 ORTHO05D007787 6.6e-12 75.5 229 30.6
PSO063G3044 Papaver somniferum HOM05D006494 ORTHO05D007787 1.9e-11 73.9 213 32.9
arahy.Tifrunner.gnm1.ann1.J3K5XQ Arachis hypogaea HOM05D006494 ORTHO05D007787 3.3e-11 73.2 218 32.1
Potri.004G101600 Populus trichocarpa HOM05D006494 ORTHO05D007787 4.3e-11 72.8 170 35.3
Aqoxy3G03609 Aquilegia oxysepala HOM05D006748 ORTHO05D008553 1.6e-10 70.9 177 34.5
PSO782G5664 Papaver somniferum HOM05D006494 ORTHO05D007787 3.6e-10 69.7 223 31.8
Sed0015630 Sechium edule HOM05D006494 ORTHO05D007787 1.8e-09 67.4 222 29.7
Psat0s2528g0040 Pisum sativum HOM05D006494 ORTHO05D007787 2.4e-09 67.0 176 32.4
Sopen06g011990 Solanum pennellii HOM05D006494 ORTHO05D007787 2.4e-09 67.0 172 37.2
COL.COLO4_10083 Corchorus olitorius HOM05D006494 ORTHO05D007787 3.1e-09 66.6 155 37.4
GSVIVG01034561001 Vitis vinifera HOM05D006494 ORTHO05D007787 2.0e-08 63.9 78 44.9
Sed0010736 Sechium edule HOM05D006494 ORTHO05D007787 2.6e-08 63.5 223 29.1
FAN18G4076 Fragaria x ananassa HOM05D006494 ORTHO05D007787 6.4e-07 58.9 255 27.5
Hund04846 Selenicereus undatus HOM05D014004 ORTHO05D015823 6.4e-07 58.9 238 28.2
FvH4_5g32440 Fragaria vesca HOM05D006494 ORTHO05D007787 1.1e-06 58.2 255 27.1
Hund04779 Selenicereus undatus HOM05D014004 ORTHO05D015823 1.4e-06 57.8 150 34.0
FAN13G0811 Fragaria x ananassa HOM05D006494 ORTHO05D007787 1.9e-06 57.4 250 28.0
MBI13_g04793_MAGBIO Magnolia biondii HOM05D003639 ORTHO05D004246 2.4e-06 57.0 112 36.6
RcHm_v2.0_Chr3g0486201 Rosa chinensis HOM05D006494 ORTHO05D007787 2.4e-06 57.0 225 28.4
AUR62031402 Chenopodium quinoa HOM05D014004 ORTHO05D015823 3.2e-06 56.6 171 31.6
AUR62034081 Chenopodium quinoa HOM05D014004 ORTHO05D015823 4.2e-06 56.2 171 31.0


User provided reference genes

Program Settings