Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro06621 Vaccinium macrocarpon HOM05D002465 ORTHO05D005308 1.1e-287 992.6 500 100.0
Actinidia34161 Actinidia chinensis HOM05D002465 ORTHO05D005308 3.2e-220 768.5 476 82.8
Dinv35264 Davidia involucrata HOM05D002465 ORTHO05D005308 2.4e-199 699.1 475 74.7
Rhsim03G0191700 Rhododendron simsii HOM05D002465 ORTHO05D005308 2.2e-192 676.0 463 77.5
QL09p012529 Quercus lobata HOM05D002465 ORTHO05D005308 9.5e-188 660.6 478 72.6
GSVIVG01028829001 Vitis vinifera HOM05D002465 ORTHO05D005308 1.4e-186 656.8 473 72.1
Nitab4.5_0007593g0010 Nicotiana tabacum HOM05D002465 ORTHO05D005308 3.1e-186 655.6 476 71.4
CAN.G290.13 Capsicum annuum HOM05D002465 ORTHO05D005308 8.9e-186 654.1 477 68.3
Haze_00055 Corylus avellana HOM05D002465 ORTHO05D005308 8.9e-186 654.1 487 70.6
Prupe.2G301900 Prunus persica HOM05D002465 ORTHO05D005308 1.5e-185 653.3 480 71.0
Cc02_g02290 Coffea canephora HOM05D002465 ORTHO05D005308 7.5e-185 651.0 495 67.5
CiPaw.05G261600 Carya illinoinensis HOM05D002465 ORTHO05D005308 1.3e-184 650.2 477 72.1
MD01G1209800 Malus domestica HOM05D002465 ORTHO05D005308 1.1e-183 647.1 479 68.9
RcHm_v2.0_Chr1g0378531 Rosa chinensis HOM05D002465 ORTHO05D005308 3.2e-183 645.6 482 70.1
Migut.F00281 Erythranthe guttata HOM05D002465 ORTHO05D005308 5.4e-183 644.8 471 69.4
DCAR_008895 Daucus carota HOM05D002465 ORTHO05D005308 2.7e-182 642.5 508 65.0
Nitab4.5_0008234g0010 Nicotiana tabacum HOM05D002465 ORTHO05D005308 6.0e-182 641.3 489 67.9
Sopen12g022610 Solanum pennellii HOM05D002465 ORTHO05D005308 2.3e-181 639.4 477 70.2
Lj1C1006G4 Lonicera japonica HOM05D002465 ORTHO05D005308 3.0e-181 639.0 457 71.8
FvH4_7g30390 Fragaria vesca HOM05D002465 ORTHO05D005308 1.9e-180 636.3 483 69.2
Lsat_1_v5_gn_9_56800 Lactuca sativa HOM05D002465 ORTHO05D005308 9.5e-180 634.0 472 68.9
FAN06G0430 Fragaria x ananassa HOM05D002465 ORTHO05D005308 2.8e-179 632.5 483 69.4
Potri.017G148000 Populus trichocarpa HOM05D002465 ORTHO05D005308 2.8e-179 632.5 473 68.9
Cpa.g.sc107.121 Carica papaya HOM05D002465 ORTHO05D005308 4.7e-179 631.7 475 68.2
FAN06G3650 Fragaria x ananassa HOM05D002465 ORTHO05D005308 6.2e-179 631.3 483 69.2
Oeu036031.1 Olea europaea HOM05D002465 ORTHO05D005308 8.1e-179 630.9 472 70.1
FAN03G3136 Fragaria x ananassa HOM05D002465 ORTHO05D005308 4.0e-178 628.6 505 66.3
Eucgr.A02722 Eucalyptus grandis HOM05D002465 ORTHO05D005308 8.9e-178 627.5 473 68.3
SalBow4G2218 Salvia bowleyana HOM05D002465 ORTHO05D005308 4.4e-177 625.2 471 66.7
FAN10G1194 Fragaria x ananassa HOM05D002465 ORTHO05D005308 5.8e-177 624.8 482 68.9
HanXRQChr15g0494161 Helianthus annuus HOM05D002465 ORTHO05D005308 5.8e-177 624.8 472 69.9
Sc13g0009230 Simmondsia chinensis HOM05D002465 ORTHO05D005308 2.9e-176 622.5 476 64.7
Thecc.03G185500 Theobroma cacao HOM05D002465 ORTHO05D005308 1.1e-175 620.5 478 67.4
ECA232G4104 Erigeron canadensis HOM05D002465 ORTHO05D005308 1.4e-175 620.2 470 68.7
Cfa016295 Carpinus fangiana HOM05D002465 ORTHO05D005308 2.4e-175 619.4 460 71.1
Sabra17G0123700 Salix brachista HOM05D002465 ORTHO05D005308 2.4e-175 619.4 488 66.2
Aqoxy5G04085 Aquilegia oxysepala HOM05D002465 ORTHO05D005308 4.2e-175 618.6 479 66.6
COL.COLO4_30301 Corchorus olitorius HOM05D002465 ORTHO05D005308 2.7e-174 615.9 488 66.4
Ciclev10006841m.g Citrus clementina HOM05D002465 ORTHO05D005308 6.0e-174 614.8 476 67.2
PSO170G2577 Papaver somniferum HOM05D002465 ORTHO05D005308 1.0e-173 614.0 478 66.3
TWI23G1289 Tripterygium wilfordii HOM05D002465 ORTHO05D005308 2.3e-173 612.8 483 65.0
AUR62021107 Chenopodium quinoa HOM05D002465 ORTHO05D005308 3.0e-173 612.5 478 64.4
TPR.G9187 Trifolium pratense HOM05D002465 ORTHO05D005308 3.0e-173 612.5 480 66.0
EL10Ac3g05400 Beta vulgaris HOM05D002465 ORTHO05D005308 5.1e-173 611.7 477 63.1
TAR374G1583 Trochodendron aralioides HOM05D002465 ORTHO05D005308 5.1e-173 611.7 398 77.1
Medtr6g052330 Medicago truncatula HOM05D002465 ORTHO05D005308 1.1e-172 610.5 476 64.3
Sabra17G0123300 Salix brachista HOM05D002465 ORTHO05D005308 1.5e-172 610.1 489 65.0
Gorai.008G274000 Gossypium raimondii HOM05D002465 ORTHO05D005308 5.6e-172 608.2 482 66.6
AUR62031432 Chenopodium quinoa HOM05D002465 ORTHO05D005308 9.6e-172 607.4 474 64.8
Gohir.D12G255900 Gossypium hirsutum HOM05D002465 ORTHO05D005308 1.2e-171 607.1 482 66.6
FAN10G1435 Fragaria x ananassa HOM05D002465 ORTHO05D005308 2.1e-171 606.3 471 68.2
Manes.06G153300 Manihot esculenta HOM05D002465 ORTHO05D005308 2.1e-171 606.3 481 67.6
Nn1g01670 Nelumbo nucifera HOM05D002465 ORTHO05D005308 1.8e-170 603.2 393 76.1
PGR042G3288 Punica granatum HOM05D002465 ORTHO05D005308 2.4e-170 602.8 478 65.3
Lj2g0016146 Lotus japonicus HOM05D002465 ORTHO05D005308 3.1e-170 602.4 487 65.1
Hund04793 Selenicereus undatus HOM05D002465 ORTHO05D005308 2.6e-169 599.4 475 63.4
Glyma.09G129600 Glycine max HOM05D002465 ORTHO05D005308 5.8e-169 598.2 481 63.2
Lalb_Chr19g0130571 Lupinus albus HOM05D002465 ORTHO05D005308 1.9e-167 593.2 479 62.4
Thhalv10012991m.g Eutrema salsugineum HOM05D002465 ORTHO05D005308 7.1e-167 591.3 475 64.2
Psat0s1684g0080 Pisum sativum HOM05D002465 ORTHO05D005308 9.3e-167 590.9 475 64.0
CSS0029570 Camellia sinensis var. sinensis HOM05D002465 ORTHO05D005308 7.8e-166 587.8 350 82.3
SGA_v2.0_scaffold60G21117 Striga asiatica HOM05D002465 ORTHO05D005308 2.5e-164 582.8 516 58.3
BcaB05g21981 Brassica carinata HOM05D002465 ORTHO05D005308 1.3e-163 580.5 473 63.8
BraA02t06223Z Brassica rapa HOM05D002465 ORTHO05D005308 1.3e-163 580.5 474 63.7
BolC2t08072H Brassica oleracea HOM05D002465 ORTHO05D005308 2.1e-163 579.7 474 63.7
BcaC03g14499 Brassica carinata HOM05D002465 ORTHO05D005308 2.8e-163 579.3 474 63.3
A02p11610 Brassica napus HOM05D002465 ORTHO05D005308 2.8e-163 579.3 474 63.5
C02p19370 Brassica napus HOM05D002465 ORTHO05D005308 8.1e-163 577.8 474 63.7
THA.LOC104811947 Tarenaya hassleriana HOM05D002465 ORTHO05D005308 1.1e-162 577.4 475 61.1
Carub.0008s1296 Capsella rubella HOM05D002465 ORTHO05D005308 2.4e-162 576.2 476 63.0
Duzib205G0901 Durio zibethinus HOM05D002465 ORTHO05D005308 1.3e-160 570.5 479 64.1
CsaV3_3G017530 Cucumis sativus L. HOM05D002465 ORTHO05D005308 2.2e-160 569.7 474 63.5
AL8G27230 Arabidopsis lyrata HOM05D002465 ORTHO05D005308 1.4e-159 567.0 479 62.6
Ah.07g206490 Amaranthus hybridus HOM05D002465 ORTHO05D005308 2.4e-159 566.2 455 61.3
ClCG05G008450 Citrullus lanatus HOM05D002465 ORTHO05D005308 5.4e-159 565.1 475 63.8
Aa31LG3G9040 Aethionema arabicum HOM05D002465 ORTHO05D005308 4.6e-158 562.0 497 57.3
AT5G52800 Arabidopsis thaliana HOM05D002465 ORTHO05D005308 1.3e-157 560.5 476 61.8
FAN01G1269 Fragaria x ananassa HOM05D002465 ORTHO05D005308 2.5e-156 556.2 447 66.7
Sp6g14950 Schrenkiella parvula HOM05D002465 ORTHO05D005308 5.6e-156 555.1 509 58.7
MBI04_g26956_MAGBIO Magnolia biondii HOM05D002465 ORTHO05D005308 6.2e-155 551.6 403 70.0
Sed0022656 Sechium edule HOM05D002465 ORTHO05D005308 1.4e-154 550.4 476 63.4
Phvul.004G106200 Phaseolus vulgaris HOM05D002465 ORTHO05D005308 6.9e-154 548.1 481 59.0
Atru.BG.183.p Acer truncatum HOM05D002465 ORTHO05D005308 9.0e-154 547.7 472 63.1
unitig_52.g17726 Utricularia gibba HOM05D002465 ORTHO05D005308 1.2e-153 547.4 481 60.5
arahy.Tifrunner.gnm1.ann1.TJ5MNL Arachis hypogaea HOM05D002465 ORTHO05D005308 7.1e-151 538.1 449 61.2
Hma1.2p1_0274F.1_g110040 Hydrangea macrophylla HOM05D002465 ORTHO05D005308 2.8e-147 526.2 417 65.9
Os07g0467900 Oryza sativa ssp. japonica HOM05D002465 ORTHO05D005308 3.1e-146 522.7 472 58.1
SHI09096 Sapria himalayana HOM05D002465 ORTHO05D005308 1.3e-144 517.3 445 60.0
Gohir.A12G253600 Gossypium hirsutum HOM05D002465 ORTHO05D005308 1.7e-144 516.9 490 59.0
arahy.Tifrunner.gnm1.ann1.77GMEU Arachis hypogaea HOM05D002465 ORTHO05D005308 2.7e-142 509.6 441 62.6
DCAR_018565 Daucus carota HOM05D002465 ORTHO05D005308 7.9e-142 508.1 382 62.6
DCAR_029292 Daucus carota HOM05D002465 ORTHO05D005308 3.0e-141 506.1 370 63.8
ATR0661G279 Amborella trichopoda HOM05D002465 ORTHO05D005308 5.7e-140 501.9 460 55.0
Peaxi162Scf00023g00823 Petunia axillaris HOM05D002465 ORTHO05D005308 4.8e-139 498.8 337 74.2
MELO3C006956.2 Cucumis melo HOM05D002465 ORTHO05D005308 5.1e-133 478.8 472 56.8
HPP92_015081 Vanilla planifolia HOM05D002465 ORTHO05D005308 1.2e-129 467.6 397 62.0
Medtr6g052340 Medicago truncatula HOM05D002465 ORTHO05D005308 1.0e-128 464.5 360 63.6
MSTRG.8702 Avicennia marina HOM05D002465 ORTHO05D005308 1.4e-127 460.7 336 69.6
RcHm_v2.0_Chr3g0497461 Rosa chinensis HOM05D002465 ORTHO05D005308 3.3e-124 449.5 374 63.4
AagrBONN_evm.TU.Sc2ySwM_228.3313 Anthoceros agrestis HOM05D002465 ORTHO05D005308 2.2e-112 410.2 480 47.1
Ca_26606_v3 Cicer arietinum L. HOM05D002465 ORTHO05D005308 2.2e-112 410.2 446 52.5
Mapoly0051s0060 Marchantia polymorpha HOM05D002465 ORTHO05D005308 1.2e-110 404.4 498 45.0
Sabra17G0121400 Salix brachista HOM05D002465 ORTHO05D005308 8.0e-110 401.7 306 68.3
Pp3c1_12340 Physcomitrium patens HOM05D002465 ORTHO05D005308 1.6e-105 387.5 435 49.2
SMO103G0001 Selaginella moellendorffii HOM05D002465 ORTHO05D005308 2.2e-99 367.1 402 48.3
VMungo0464G1215 Vigna mungo HOM05D002465 ORTHO05D005308 1.3e-91 341.3 289 59.9
CBR_g36403 Chara braunii HOM05D002465 ORTHO05D005308 1.1e-79 301.6 435 41.8
DCAR_005086 Daucus carota HOM05D002465 ORTHO05D005308 4.0e-77 293.1 332 46.1
CANSAT21G2443 Cannabis sativa HOM05D002465 ORTHO05D005308 1.5e-71 274.6 199 72.4
DCAR_030059 Daucus carota HOM05D002465 ORTHO05D005308 3.4e-68 263.5 181 66.9
SEGI_25618 Sequoiadendron giganteum HOM05D002465 ORTHO05D005308 2.7e-65 253.8 209 57.9
Oeu058603.1 Olea europaea HOM05D002465 ORTHO05D005308 4.3e-63 246.5 187 68.4
DCAR_029376 Daucus carota HOM05D002465 ORTHO05D005308 2.8e-62 243.8 155 69.0
FAN05G2518 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.8e-61 241.1 163 72.4
FAN25G3664 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.8e-61 241.1 163 72.4
FAN09G4610 Fragaria x ananassa HOM05D002465 ORTHO05D005308 4.0e-61 240.0 159 73.6
FAN10G2552 Fragaria x ananassa HOM05D002465 ORTHO05D005308 4.0e-61 240.0 159 73.6
MCO12G313 Micromonas commoda HOM05D002465 ORTHO05D005308 3.3e-47 193.7 356 35.7
Actinidia08585 Actinidia chinensis HOM05D002465 ORTHO05D005308 4.5e-44 183.3 97 85.6
CSS0047166 Camellia sinensis var. sinensis HOM05D002465 ORTHO05D005308 6.4e-43 179.5 114 76.3
MD01G1209700 Malus domestica HOM05D002465 ORTHO05D005308 4.6e-41 173.3 202 54.5
MSTRG.8701 Avicennia marina HOM05D002465 ORTHO05D005308 3.7e-38 163.7 121 71.9
Actinidia08586 Actinidia chinensis HOM05D002465 ORTHO05D008860 2.4e-37 161.0 122 70.5
Rhsim10G0052100 Rhododendron simsii HOM05D002465 ORTHO05D036401 8.4e-35 152.5 92 94.6
Psat0s1616g0040 Pisum sativum HOM05D002465 ORTHO05D005308 1.4e-34 151.8 133 64.7
RcHm_v2.0_Chr1g0361031 Rosa chinensis HOM05D002465 ORTHO05D005308 1.6e-33 148.3 95 71.6
FAN03G1432 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.9e-31 141.4 161 49.1
FAN09G0727 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.9e-31 141.4 161 49.1
FAN16G1547 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.9e-31 141.4 161 49.1
FAN22G1212 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.9e-31 141.4 161 49.1
FAN25G1827 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.9e-31 141.4 161 49.1
FAN25G2717 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.9e-31 141.4 161 49.1
FAN28G0992 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.9e-31 141.4 161 49.1
FAN09G3189 Fragaria x ananassa HOM05D002465 ORTHO05D005308 5.7e-31 139.8 157 49.7
FAN14G0324 Fragaria x ananassa HOM05D002465 ORTHO05D005308 5.7e-31 139.8 157 49.7
FAN21G0521 Fragaria x ananassa HOM05D002465 ORTHO05D005308 5.7e-31 139.8 157 49.7
FAN27G0148 Fragaria x ananassa HOM05D002465 ORTHO05D005308 5.7e-31 139.8 157 49.7
FAN27G0541 Fragaria x ananassa HOM05D002465 ORTHO05D005308 5.7e-31 139.8 157 49.7
FAN27G0848 Fragaria x ananassa HOM05D002465 ORTHO05D005308 5.7e-31 139.8 157 49.7
Zm00001eb320240 Zea mays HOM05D002465 ORTHO05D005308 1.5e-28 131.7 127 57.5
PRCOL_00005773 Prasinoderma coloniale HOM05D002465 ORTHO05D005308 5.9e-28 129.8 208 40.4
CBR_g81559 Chara braunii HOM05D002465 ORTHO05D005308 1.8e-24 118.2 172 37.2
HPP92_028543 Vanilla planifolia HOM05D002465 ORTHO05D005308 3.3e-23 114.0 75 70.7
Sabra17G0121500 Salix brachista HOM05D002465 ORTHO05D005308 3.1e-21 107.5 132 47.0
Sabra18G0007300 Salix brachista HOM05D002718 ORTHO05D003269 1.1e-18 99.0 72 80.6
CBR_g19350 Chara braunii HOM05D000019 ORTHO05D000048 2.1e-17 94.7 162 34.6
Cre17.g705150 Chlamydomonas reinhardtii HOM05D002465 ORTHO05D005308 7.9e-17 92.8 327 26.6
FAN23G0684 Fragaria x ananassa HOM05D002465 ORTHO05D000592 8.8e-16 89.4 156 37.2
DCAR_030105 Daucus carota HOM05D002465 ORTHO05D005308 8.2e-14 82.8 91 42.9
SEGI_28877 Sequoiadendron giganteum HOM05D002465 ORTHO05D005308 1.0e-08 65.9 36 72.2
Cre12.g553253 Chlamydomonas reinhardtii HOM05D002465 ORTHO05D145954 3.9e-08 63.9 57 49.1
Solyc12g044350.1 Solanum lycopersicum HOM05D002465 ORTHO05D005308 6.7e-08 63.2 34 76.5
CBR_g47978 Chara braunii HOM05D002465 ORTHO05D005308 2.0e-07 61.6 110 31.8
MBI04_g15062_MAGBIO Magnolia biondii HOM05D002465 ORTHO05D005308 2.6e-07 61.2 167 32.9
Peaxi162Scf00023g00818 Petunia axillaris HOM05D002465 ORTHO05D005308 2.6e-07 61.2 34 73.5
FAN01G2746 Fragaria x ananassa HOM05D000539 ORTHO05D000592 5.7e-07 60.1 57 54.4
Hma1.2p1_2578F.1_g324720 Hydrangea macrophylla HOM05D002465 ORTHO05D036401 3.7e-06 57.4 64 59.4
RcHm_v2.0_Chr2g0085031 Rosa chinensis HOM05D002465 ORTHO05D005308 6.3e-06 56.6 32 81.2


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