Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro06620 Vaccinium macrocarpon HOM05D002465 ORTHO05D005308 2.4e-80 302.0 141 100.0
Rhsim03G0191700 Rhododendron simsii HOM05D002465 ORTHO05D005308 1.9e-61 239.2 131 84.0
Actinidia34161 Actinidia chinensis HOM05D002465 ORTHO05D005308 2.1e-47 192.6 142 63.4
Dinv35264 Davidia involucrata HOM05D002465 ORTHO05D005308 1.5e-42 176.4 140 57.9
GSVIVG01028829001 Vitis vinifera HOM05D002465 ORTHO05D005308 4.2e-40 168.3 141 54.6
Hma1.2p1_0274F.1_g110040 Hydrangea macrophylla HOM05D002465 ORTHO05D005308 7.1e-40 167.5 151 50.3
QL09p012529 Quercus lobata HOM05D002465 ORTHO05D005308 3.9e-38 161.8 142 53.5
TAR374G1583 Trochodendron aralioides HOM05D002465 ORTHO05D005308 7.4e-37 157.5 138 55.1
Cfa016295 Carpinus fangiana HOM05D002465 ORTHO05D005308 9.0e-35 150.6 142 47.2
Haze_00055 Corylus avellana HOM05D002465 ORTHO05D005308 4.5e-34 148.3 143 47.6
Sabra17G0123700 Salix brachista HOM05D002465 ORTHO05D005308 1.3e-33 146.7 148 49.3
Nitab4.5_0007593g0010 Nicotiana tabacum HOM05D002465 ORTHO05D005308 3.8e-33 145.2 139 52.5
Gohir.A12G253600 Gossypium hirsutum HOM05D002465 ORTHO05D005308 5.0e-33 144.8 140 45.7
Gorai.008G274000 Gossypium raimondii HOM05D002465 ORTHO05D005308 5.0e-33 144.8 140 45.7
Oeu036031.1 Olea europaea HOM05D002465 ORTHO05D005308 1.1e-32 143.7 142 48.6
Thecc.03G185500 Theobroma cacao HOM05D002465 ORTHO05D005308 1.1e-32 143.7 144 46.5
CAN.G290.13 Capsicum annuum HOM05D002465 ORTHO05D005308 1.4e-32 143.3 139 50.4
CSS0047166 Camellia sinensis var. sinensis HOM05D002465 ORTHO05D005308 1.9e-32 142.9 117 62.4
Manes.06G153300 Manihot esculenta HOM05D002465 ORTHO05D005308 4.2e-32 141.7 140 45.7
Sabra17G0123300 Salix brachista HOM05D002465 ORTHO05D005308 1.2e-31 140.2 148 46.6
MSTRG.8701 Avicennia marina HOM05D002465 ORTHO05D005308 2.1e-31 139.4 139 49.6
ECA232G4104 Erigeron canadensis HOM05D002465 ORTHO05D005308 2.1e-31 139.4 140 47.9
Migut.F00281 Erythranthe guttata HOM05D002465 ORTHO05D005308 1.0e-30 137.1 142 50.0
Aqoxy5G04085 Aquilegia oxysepala HOM05D002465 ORTHO05D005308 2.3e-30 136.0 140 45.7
Potri.017G148000 Populus trichocarpa HOM05D002465 ORTHO05D005308 3.0e-30 135.6 138 49.3
Sed0022656 Sechium edule HOM05D002465 ORTHO05D005308 3.9e-30 135.2 132 47.0
ClCG05G008450 Citrullus lanatus HOM05D002465 ORTHO05D005308 5.1e-30 134.8 131 49.6
Nitab4.5_0008234g0010 Nicotiana tabacum HOM05D002465 ORTHO05D005308 6.7e-30 134.4 130 51.5
Ciclev10006841m.g Citrus clementina HOM05D002465 ORTHO05D005308 8.7e-30 134.0 143 47.6
SGA_v2.0_scaffold60G21117 Striga asiatica HOM05D002465 ORTHO05D005308 8.7e-30 134.0 141 48.2
MELO3C006956.2 Cucumis melo HOM05D002465 ORTHO05D005308 1.1e-29 133.7 131 48.9
CsaV3_3G017530 Cucumis sativus L. HOM05D002465 ORTHO05D005308 3.3e-29 132.1 132 48.5
Sopen12g022610 Solanum pennellii HOM05D002465 ORTHO05D005308 3.3e-29 132.1 138 45.7
HanXRQChr15g0494161 Helianthus annuus HOM05D002465 ORTHO05D005308 7.4e-29 131.0 141 44.0
Prupe.2G301900 Prunus persica HOM05D002465 ORTHO05D005308 1.6e-28 129.8 138 46.4
Cc02_g02290 Coffea canephora HOM05D002465 ORTHO05D005308 3.7e-28 128.6 144 44.4
TWI23G1289 Tripterygium wilfordii HOM05D002465 ORTHO05D005308 6.3e-28 127.9 138 47.1
MD01G1209800 Malus domestica HOM05D002465 ORTHO05D005308 8.2e-28 127.5 141 44.7
PSO170G2577 Papaver somniferum HOM05D002465 ORTHO05D005308 1.1e-27 127.1 136 41.9
Medtr6g052330 Medicago truncatula HOM05D002465 ORTHO05D005308 1.8e-27 126.3 144 45.8
Lalb_Chr19g0130571 Lupinus albus HOM05D002465 ORTHO05D005308 1.2e-26 123.6 140 47.9
DCAR_008895 Daucus carota HOM05D002465 ORTHO05D005308 1.5e-26 123.2 142 43.0
Glyma.09G129600 Glycine max HOM05D002465 ORTHO05D005308 1.5e-26 123.2 138 47.8
EL10Ac3g05400 Beta vulgaris HOM05D002465 ORTHO05D005308 2.0e-26 122.9 139 43.9
SalBow4G2218 Salvia bowleyana HOM05D002465 ORTHO05D005308 3.4e-26 122.1 121 44.6
Nn1g01670 Nelumbo nucifera HOM05D002465 ORTHO05D005308 4.5e-26 121.7 115 48.7
Cpa.g.sc107.121 Carica papaya HOM05D002465 ORTHO05D005308 8.5e-25 117.5 141 41.1
Lj2g0016146 Lotus japonicus HOM05D002465 ORTHO05D005308 1.1e-24 117.1 146 43.8
Peaxi162Scf00023g00823 Petunia axillaris HOM05D002465 ORTHO05D005308 4.2e-24 115.2 113 48.7
COL.COLO4_30301 Corchorus olitorius HOM05D002465 ORTHO05D005308 5.5e-24 114.8 114 43.9
Actinidia08586 Actinidia chinensis HOM05D002465 ORTHO05D008860 1.2e-23 113.6 102 58.8
DCAR_029292 Daucus carota HOM05D002465 ORTHO05D005308 1.2e-23 113.6 111 47.7
Duzib205G0901 Durio zibethinus HOM05D002465 ORTHO05D005308 1.2e-23 113.6 125 45.6
Hund04793 Selenicereus undatus HOM05D002465 ORTHO05D005308 2.7e-23 112.5 123 48.8
RcHm_v2.0_Chr1g0378531 Rosa chinensis HOM05D002465 ORTHO05D005308 6.1e-23 111.3 141 41.1
BraA02t06223Z Brassica rapa HOM05D002465 ORTHO05D005308 7.9e-23 110.9 133 40.6
Gohir.D12G255900 Gossypium hirsutum HOM05D002465 ORTHO05D005308 1.4e-22 110.2 140 39.3
DCAR_018565 Daucus carota HOM05D002465 ORTHO05D005308 1.8e-22 109.8 106 49.1
BcaC03g14499 Brassica carinata HOM05D002465 ORTHO05D005308 2.3e-22 109.4 132 37.1
arahy.Tifrunner.gnm1.ann1.77GMEU Arachis hypogaea HOM05D002465 ORTHO05D005308 3.0e-22 109.0 134 44.0
Lsat_1_v5_gn_9_56800 Lactuca sativa HOM05D002465 ORTHO05D005308 3.0e-22 109.0 137 41.6
BcaB05g21981 Brassica carinata HOM05D002465 ORTHO05D005308 3.9e-22 108.6 132 39.4
C02p19370 Brassica napus HOM05D002465 ORTHO05D005308 8.8e-22 107.5 133 39.8
CANSAT21G2443 Cannabis sativa HOM05D002465 ORTHO05D005308 8.8e-22 107.5 136 42.6
A02p11610 Brassica napus HOM05D002465 ORTHO05D005308 1.5e-21 106.7 132 37.1
Sc13g0009230 Simmondsia chinensis HOM05D002465 ORTHO05D005308 2.0e-21 106.3 135 41.5
Carub.0008s1296 Capsella rubella HOM05D002465 ORTHO05D005308 2.6e-21 105.9 136 39.0
Aa31LG3G9040 Aethionema arabicum HOM05D002465 ORTHO05D005308 3.3e-21 105.5 131 42.0
DCAR_030105 Daucus carota HOM05D002465 ORTHO05D005308 4.4e-21 105.1 106 46.2
Thhalv10012991m.g Eutrema salsugineum HOM05D002465 ORTHO05D005308 7.4e-21 104.4 134 35.8
TPR.G9187 Trifolium pratense HOM05D002465 ORTHO05D005308 1.3e-20 103.6 144 39.6
Os07g0467900 Oryza sativa ssp. japonica HOM05D002465 ORTHO05D005308 1.7e-20 103.2 139 39.6
FAN10G1194 Fragaria x ananassa HOM05D002465 ORTHO05D005308 2.2e-20 102.8 137 40.9
MBI04_g26956_MAGBIO Magnolia biondii HOM05D002465 ORTHO05D005308 2.2e-20 102.8 103 49.5
Eucgr.A02722 Eucalyptus grandis HOM05D002465 ORTHO05D005308 2.8e-20 102.4 139 37.4
FAN06G0430 Fragaria x ananassa HOM05D002465 ORTHO05D005308 2.8e-20 102.4 137 40.9
FAN06G3650 Fragaria x ananassa HOM05D002465 ORTHO05D005308 2.8e-20 102.4 137 40.9
PGR042G3288 Punica granatum HOM05D002465 ORTHO05D005308 3.7e-20 102.1 135 40.0
AL8G27230 Arabidopsis lyrata HOM05D002465 ORTHO05D005308 6.3e-20 101.3 136 39.0
FAN10G1435 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.1e-19 100.5 137 40.1
Ah.07g206490 Amaranthus hybridus HOM05D002465 ORTHO05D005308 1.4e-19 100.1 150 35.3
AT5G52800 Arabidopsis thaliana HOM05D002465 ORTHO05D005308 1.4e-19 100.1 136 36.8
AUR62021107 Chenopodium quinoa HOM05D002465 ORTHO05D005308 1.8e-19 99.8 106 42.5
FvH4_7g30390 Fragaria vesca HOM05D002465 ORTHO05D005308 4.1e-19 98.6 113 43.4
PSO063G0346 Papaver somniferum HOM05D002465 ORTHO05D005308 5.3e-19 98.2 123 38.2
FAN03G3136 Fragaria x ananassa HOM05D002465 ORTHO05D005308 2.0e-18 96.3 117 41.9
Mapoly0051s0060 Marchantia polymorpha HOM05D002465 ORTHO05D005308 2.6e-18 95.9 143 37.1
Lj1C1006G4 Lonicera japonica HOM05D002465 ORTHO05D005308 3.4e-18 95.5 106 46.2
Zm00001eb320240 Zea mays HOM05D002465 ORTHO05D005308 3.4e-18 95.5 115 43.5
AUR62031432 Chenopodium quinoa HOM05D002465 ORTHO05D005308 5.9e-18 94.7 128 39.8
THA.LOC104811947 Tarenaya hassleriana HOM05D002465 ORTHO05D005308 1.7e-17 93.2 137 35.0
ATR0661G279 Amborella trichopoda HOM05D002465 ORTHO05D005308 2.2e-17 92.8 117 44.4
unitig_52.g17726 Utricularia gibba HOM05D002465 ORTHO05D005308 2.9e-17 92.4 106 42.5
BolC2t08072H Brassica oleracea HOM05D002465 ORTHO05D005308 3.8e-17 92.0 112 39.3
Sp6g14950 Schrenkiella parvula HOM05D002465 ORTHO05D005308 3.8e-17 92.0 111 36.9
HPP92_015081 Vanilla planifolia HOM05D002465 ORTHO05D005308 4.2e-16 88.6 106 41.5
Ca_26606_v3 Cicer arietinum L. HOM05D002465 ORTHO05D005308 5.5e-16 88.2 106 44.3
FAN01G1269 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.6e-15 86.7 132 37.9
Psat0s1684g0080 Pisum sativum HOM05D002465 ORTHO05D005308 4.7e-15 85.1 118 38.1
Pp3c1_12340 Physcomitrium patens HOM05D002465 ORTHO05D005308 1.8e-14 83.2 168 31.5
SEGI_28877 Sequoiadendron giganteum HOM05D002465 ORTHO05D005308 2.3e-14 82.8 113 40.7
HPP92_028543 Vanilla planifolia HOM05D002465 ORTHO05D005308 3.0e-14 82.4 106 39.6
AagrBONN_evm.TU.Sc2ySwM_228.3313 Anthoceros agrestis HOM05D002465 ORTHO05D005308 1.8e-11 73.2 169 30.2
Medtr6g052340 Medicago truncatula HOM05D002465 ORTHO05D005308 2.4e-11 72.8 74 50.0
CBR_g36403 Chara braunii HOM05D002465 ORTHO05D005308 2.0e-10 69.7 43 62.8
MCO12G313 Micromonas commoda HOM05D002465 ORTHO05D005308 1.9e-08 63.2 52 40.4
Phvul.004G106200 Phaseolus vulgaris HOM05D002465 ORTHO05D005308 2.3e-06 56.2 28 78.6
Cre17.g705150 Chlamydomonas reinhardtii HOM05D002465 ORTHO05D005308 6.7e-06 54.7 40 50.0
CiPaw.05G261600 Carya illinoinensis HOM05D002465 ORTHO05D005308 8.8e-06 54.3 27 77.8
MD01G1209700 Malus domestica HOM05D002465 ORTHO05D005308 8.8e-06 54.3 28 71.4
PRCOL_00005773 Prasinoderma coloniale HOM05D002465 ORTHO05D005308 8.8e-06 54.3 114 28.1


User provided reference genes

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