Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro06589 Vaccinium macrocarpon HOM05D005720 ORTHO05D006984 1.0e-154 550.1 280 100.0
Rhsim03G0197100 Rhododendron simsii HOM05D005720 ORTHO05D006984 2.6e-126 455.7 310 78.4
CSS0038820 Camellia sinensis var. sinensis HOM05D005720 ORTHO05D006984 8.2e-104 380.9 307 68.4
CSS0019438 Camellia sinensis var. sinensis HOM05D005720 ORTHO05D006984 6.9e-103 377.9 307 68.1
Dinv28352 Davidia involucrata HOM05D005720 ORTHO05D006984 1.3e-85 320.5 317 58.4
Hma1.2p1_0142F.1_g064140 Hydrangea macrophylla HOM05D005720 ORTHO05D006984 6.1e-67 258.5 312 49.7
Hma1.2p1_0142F.1_g064130 Hydrangea macrophylla HOM05D005720 ORTHO05D006984 8.0e-67 258.1 313 49.5
GSVIVG01028746001 Vitis vinifera HOM05D005720 ORTHO05D006984 4.8e-64 248.8 309 49.5
Lj3A914T79 Lonicera japonica HOM05D005720 ORTHO05D006984 1.1e-63 247.7 342 45.6
MSTRG.27056 Avicennia marina HOM05D005720 ORTHO05D006984 6.5e-61 238.4 305 47.9
Actinidia08611 Actinidia chinensis HOM05D005720 ORTHO05D006984 4.2e-60 235.7 197 66.5
Peaxi162Scf00904g00464 Petunia axillaris HOM05D005720 ORTHO05D006984 2.1e-59 233.4 299 50.2
ECA248G2416 Erigeron canadensis HOM05D005720 ORTHO05D006984 3.6e-59 232.6 277 51.3
Oeu037117.2 Olea europaea HOM05D005720 ORTHO05D006984 8.0e-59 231.5 303 47.9
HanXRQChr11g0353671 Helianthus annuus HOM05D005720 ORTHO05D006984 2.3e-58 229.9 279 50.2
Cfa016346 Carpinus fangiana HOM05D005720 ORTHO05D006984 3.0e-58 229.6 316 46.8
Potri.012G033800 Populus trichocarpa HOM05D005720 ORTHO05D006984 4.0e-58 229.2 308 46.8
Sopen03g003510 Solanum pennellii HOM05D005720 ORTHO05D006984 5.2e-58 228.8 300 49.0
QL09p011597 Quercus lobata HOM05D005720 ORTHO05D006984 6.8e-58 228.4 325 46.2
Solyc03g007550.4 Solanum lycopersicum HOM05D005720 ORTHO05D006984 6.8e-58 228.4 301 48.8
CiPaw.06G006200 Carya illinoinensis HOM05D005720 ORTHO05D006984 1.5e-57 227.3 319 47.3
Cc02_g02050 Coffea canephora HOM05D005720 ORTHO05D006984 2.6e-57 226.5 313 45.4
Nitab4.5_0001331g0120 Nicotiana tabacum HOM05D005720 ORTHO05D006984 5.7e-57 225.3 282 51.4
Nitab4.5_0000472g0110 Nicotiana tabacum HOM05D005720 ORTHO05D006984 1.1e-55 221.1 293 49.1
Migut.F00255 Erythranthe guttata HOM05D005720 ORTHO05D006984 2.4e-55 219.9 295 47.1
TAR629G3278 Trochodendron aralioides HOM05D005720 ORTHO05D006984 3.1e-55 219.5 248 55.2
Sabra12G0022900 Salix brachista HOM05D005720 ORTHO05D006984 7.0e-55 218.4 305 46.2
SalBow4G2744 Salvia bowleyana HOM05D005720 ORTHO05D006984 9.1e-55 218.0 291 46.0
SalBow4G2908 Salvia bowleyana HOM05D005720 ORTHO05D006984 9.1e-55 218.0 291 46.0
Thecc.03G190400 Theobroma cacao HOM05D005720 ORTHO05D006984 3.5e-54 216.1 317 45.1
Manes.06G155900 Manihot esculenta HOM05D005720 ORTHO05D006984 2.3e-53 213.4 313 44.1
TAR636G3648 Trochodendron aralioides HOM05D005720 ORTHO05D006984 2.9e-53 213.0 307 45.6
Prupe.2G305400 Prunus persica HOM05D005720 ORTHO05D006984 3.3e-52 209.5 322 45.3
TWI39G1277 Tripterygium wilfordii HOM05D005720 ORTHO05D006984 5.5e-52 208.8 316 44.6
CAN.G108.10 Capsicum annuum HOM05D005720 ORTHO05D006984 9.5e-52 208.0 306 45.1
HanXRQChr01g0031161 Helianthus annuus HOM05D005720 ORTHO05D006984 4.7e-51 205.7 298 45.6
Gohir.D09G177900 Gossypium hirsutum HOM05D005720 ORTHO05D006984 3.0e-50 203.0 317 43.5
PGSC0003DMG400006595 Solanum tuberosum HOM05D005720 ORTHO05D006984 8.9e-50 201.4 246 51.2
Cpa.g.sc3.32 Carica papaya HOM05D005720 ORTHO05D006984 4.4e-49 199.1 304 42.1
FvH4_7g30790 Fragaria vesca HOM05D005720 ORTHO05D006984 9.8e-49 198.0 313 44.1
MD01G1213400 Malus domestica HOM05D005720 ORTHO05D006984 9.8e-49 198.0 320 43.8
Gohir.A09G183200 Gossypium hirsutum HOM05D005720 ORTHO05D006984 1.7e-48 197.2 317 42.6
Gorai.006G200000 Gossypium raimondii HOM05D005720 ORTHO05D006984 2.9e-48 196.4 317 42.9
COL.COLO4_24780 Corchorus olitorius HOM05D005720 ORTHO05D006984 4.9e-48 195.7 244 48.0
Duzib084G1243 Durio zibethinus HOM05D005720 ORTHO05D006984 8.3e-48 194.9 317 43.2
FAN06G3446 Fragaria x ananassa HOM05D005720 ORTHO05D006984 1.1e-47 194.5 317 43.5
FAN06G1427 Fragaria x ananassa HOM05D005720 ORTHO05D006984 2.4e-47 193.4 320 43.1
FAN01G1865 Fragaria x ananassa HOM05D005720 ORTHO05D006984 4.1e-47 192.6 317 43.2
Nn1g01775 Nelumbo nucifera HOM05D005720 ORTHO05D006984 5.4e-47 192.2 296 45.6
DCAR_010640 Daucus carota HOM05D005720 ORTHO05D006984 7.0e-47 191.8 300 41.7
RcHm_v2.0_Chr1g0379731 Rosa chinensis HOM05D005720 ORTHO05D006984 3.5e-46 189.5 318 43.1
FAN03G0014 Fragaria x ananassa HOM05D005720 ORTHO05D006984 4.6e-46 189.1 314 43.3
Lsat_1_v5_gn_1_45000 Lactuca sativa HOM05D005720 ORTHO05D006984 1.0e-45 188.0 289 47.1
MD07G1283200 Malus domestica HOM05D005720 ORTHO05D006984 5.0e-45 185.7 325 42.8
AUR62031469 Chenopodium quinoa HOM05D005720 ORTHO05D006984 1.1e-44 184.5 304 44.4
Hma1.2p1_1891F.1_g306670 Hydrangea macrophylla HOM05D005720 ORTHO05D006984 1.1e-44 184.5 167 59.3
Eucgr.K00315 Eucalyptus grandis HOM05D005720 ORTHO05D006984 4.3e-44 182.6 304 41.4
Lalb_Chr06g0161451 Lupinus albus HOM05D005720 ORTHO05D006984 4.3e-44 182.6 305 41.3
MD01G1213200 Malus domestica HOM05D005720 ORTHO05D006984 2.1e-43 180.3 320 41.6
EL10Ac3g05366 Beta vulgaris HOM05D005720 ORTHO05D006984 6.1e-43 178.7 307 41.7
unitig_747.g21855 Utricularia gibba HOM05D000121 ORTHO05D000102 6.1e-43 178.7 290 42.4
FAN10G0387 Fragaria x ananassa HOM05D005720 ORTHO05D006984 1.8e-42 177.2 314 41.1
SGA_v2.0_scaffold192G40596 Striga asiatica HOM05D005720 ORTHO05D006984 4.0e-42 176.0 254 44.9
THA.LOC104825125 Tarenaya hassleriana HOM05D005720 ORTHO05D006984 3.4e-41 172.9 320 40.3
Aa31LG3G9180 Aethionema arabicum HOM05D005720 ORTHO05D006984 1.7e-40 170.6 289 40.8
Hund11695 Selenicereus undatus HOM05D005720 ORTHO05D006984 1.7e-40 170.6 255 43.9
Sc13g0009450 Simmondsia chinensis HOM05D005720 ORTHO05D006984 2.2e-40 170.2 291 41.9
PGR142G3228 Punica granatum HOM05D005720 ORTHO05D006984 3.7e-40 169.5 310 40.6
Haze_00092 Corylus avellana HOM05D005720 ORTHO05D006984 6.4e-40 168.7 298 41.3
Aqoxy7G00210 Aquilegia oxysepala HOM05D005720 ORTHO05D006984 3.2e-39 166.4 302 41.4
Ah.07g206170 Amaranthus hybridus HOM05D005720 ORTHO05D006984 5.4e-39 165.6 309 40.1
CsaV3_4G002370 Cucumis sativus L. HOM05D005720 ORTHO05D006984 1.2e-38 164.5 298 40.6
MBI06_g04292_MAGBIO Magnolia biondii HOM05D005720 ORTHO05D006984 1.2e-38 164.5 306 37.9
Glyma.16G069100 Glycine max HOM05D005720 ORTHO05D006984 1.7e-37 160.6 311 40.2
arahy.Tifrunner.gnm1.ann1.35A5BC Arachis hypogaea HOM05D005720 ORTHO05D006984 2.3e-37 160.2 251 43.0
arahy.Tifrunner.gnm1.ann1.YA4Y9S Arachis hypogaea HOM05D005720 ORTHO05D006984 2.3e-37 160.2 251 43.0
Sed0011275 Sechium edule HOM05D005720 ORTHO05D006984 2.3e-37 160.2 273 40.7
Thhalv10012590m.g Eutrema salsugineum HOM05D005720 ORTHO05D006984 1.9e-36 157.1 300 39.0
Psat0s2250g0040 Pisum sativum HOM05D005720 ORTHO05D006984 2.5e-36 156.8 310 38.4
TPR.G16464 Trifolium pratense HOM05D005720 ORTHO05D006984 3.6e-35 152.9 299 38.8
MELO3C017804.2 Cucumis melo HOM05D005720 ORTHO05D006984 6.2e-35 152.1 279 40.5
Ca_27881_v3 Cicer arietinum L. HOM05D005720 ORTHO05D006984 1.1e-34 151.4 302 39.1
CARHR265920 Cardamine hirsuta HOM05D005720 ORTHO05D006984 1.8e-34 150.6 298 37.2
Phvul.011G167400 Phaseolus vulgaris HOM05D005720 ORTHO05D006984 3.1e-34 149.8 244 42.6
AL8G27450 Arabidopsis lyrata HOM05D005720 ORTHO05D006984 2.0e-33 147.1 303 36.3
Psat4g140280 Pisum sativum HOM05D005720 ORTHO05D006984 7.5e-33 145.2 308 37.0
BcaB05g21993 Brassica carinata HOM05D005720 ORTHO05D006984 3.7e-32 142.9 298 36.2
Lj3g0007394 Lotus japonicus HOM05D005720 ORTHO05D006984 3.7e-32 142.9 317 37.9
Carub.0008s1313 Capsella rubella HOM05D005720 ORTHO05D006984 8.3e-32 141.7 296 35.8
VMungo1127G0215 Vigna mungo HOM05D005720 ORTHO05D006984 1.4e-31 141.0 310 37.1
AT5G52950 Arabidopsis thaliana HOM05D005720 ORTHO05D006984 4.1e-31 139.4 232 42.7
PSO135G0324 Papaver somniferum HOM05D005720 ORTHO05D006984 1.3e-29 134.4 312 35.9
AUR62021063 Chenopodium quinoa HOM05D005720 ORTHO05D006984 8.6e-29 131.7 303 37.6
PSO384G4812 Papaver somniferum HOM05D005720 ORTHO05D006984 8.6e-29 131.7 312 36.2
ClCG07G011830 Citrullus lanatus HOM05D005720 ORTHO05D006984 9.5e-28 128.3 284 37.0
A02p11480 Brassica napus HOM05D005720 ORTHO05D006984 1.8e-26 124.0 293 35.2
Sp6g15110 Schrenkiella parvula HOM05D005720 ORTHO05D006984 4.0e-26 122.9 299 33.1
Medtr8g058270 Medicago truncatula HOM05D005720 ORTHO05D006984 1.2e-25 121.3 267 37.1
BraA02t06213Z Brassica rapa HOM05D005720 ORTHO05D006984 2.0e-25 120.6 293 34.8
BcaC03g14481 Brassica carinata HOM05D005720 ORTHO05D006984 4.9e-24 115.9 293 34.5
C02p19150 Brassica napus HOM05D005720 ORTHO05D006984 6.4e-24 115.5 296 33.8
C09p42670 Brassica napus HOM05D005720 ORTHO05D006984 1.9e-23 114.0 300 32.7
BolC9t57143H Brassica oleracea HOM05D005720 ORTHO05D006984 1.9e-23 114.0 300 32.7
CDE02G2607 Ceratophyllum demersum HOM05D005720 ORTHO05D006984 2.4e-23 113.6 242 34.7
BolC2t08045H Brassica oleracea HOM05D005720 ORTHO05D006984 4.1e-23 112.8 296 33.4
Actinidia30732 Actinidia chinensis HOM05D005720 ORTHO05D006984 1.3e-21 107.8 166 45.8
SEGI_30168 Sequoiadendron giganteum HOM05D005720 ORTHO05D006984 1.3e-21 107.8 285 30.5
HPP92_005221 Vanilla planifolia HOM05D005720 ORTHO05D006984 3.0e-21 106.7 270 30.0
HPP92_005214 Vanilla planifolia HOM05D005720 ORTHO05D006984 6.6e-21 105.5 240 31.2
Zm00001eb119640 Zea mays HOM05D005720 ORTHO05D006984 1.5e-20 104.4 308 29.2
Os01g0222300 Oryza sativa ssp. japonica HOM05D005720 ORTHO05D006984 2.5e-20 103.6 299 29.1
SHI10812 Sapria himalayana HOM05D005720 ORTHO05D006984 8.9e-18 95.1 170 38.8
Actinidia34180 Actinidia chinensis HOM05D005720 ORTHO05D006984 5.4e-15 85.9 116 49.1
ATR1131G019 Amborella trichopoda HOM05D005720 ORTHO05D006984 2.7e-14 83.6 283 31.4
MSTRG.8687 Avicennia marina HOM05D005720 ORTHO05D006984 5.8e-09 65.9 133 38.3
FAN10G2558 Fragaria x ananassa HOM05D005720 ORTHO05D006984 2.4e-07 60.5 122 34.4


User provided reference genes

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