Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro06529 Vaccinium macrocarpon HOM05D008311 ORTHO05D010526 5.5e-251 870.5 452 100.0
Actinidia08755 Actinidia chinensis HOM05D008311 ORTHO05D010526 7.6e-152 541.2 394 73.6
Dinv29140 Davidia involucrata HOM05D008311 ORTHO05D010526 3.8e-143 512.3 417 66.2
TAR629G0038 Trochodendron aralioides HOM05D008311 ORTHO05D010526 1.1e-139 500.7 389 66.1
GSVIVG01024350001 Vitis vinifera HOM05D008311 ORTHO05D010526 1.4e-134 483.8 400 63.5
Cfa016060 Carpinus fangiana HOM05D008311 ORTHO05D010526 7.2e-134 481.5 435 60.9
Thecc.05G218800 Theobroma cacao HOM05D008311 ORTHO05D010526 2.7e-133 479.6 410 62.9
Haze_00388 Corylus avellana HOM05D008311 ORTHO05D010526 1.1e-126 457.6 410 60.0
Aqoxy4G02584 Aquilegia oxysepala HOM05D008311 ORTHO05D010526 9.4e-126 454.5 399 58.9
Nn3g20131 Nelumbo nucifera HOM05D008311 ORTHO05D010526 9.4e-126 454.5 417 58.5
Gohir.A08G221662 Gossypium hirsutum HOM05D008311 ORTHO05D010526 3.9e-124 449.1 422 60.2
Ciclev10020460m.g Citrus clementina HOM05D008311 ORTHO05D010526 1.5e-123 447.2 350 63.4
CiPaw.05G215000 Carya illinoinensis HOM05D008311 ORTHO05D010526 4.4e-123 445.7 378 63.0
QL09p022981 Quercus lobata HOM05D008311 ORTHO05D010526 4.4e-123 445.7 491 52.1
Gorai.004G256700 Gossypium raimondii HOM05D008311 ORTHO05D010526 5.3e-121 438.7 400 62.5
Manes.09G128000 Manihot esculenta HOM05D008311 ORTHO05D010526 2.0e-120 436.8 436 55.3
MBI04_g20345_MAGBIO Magnolia biondii HOM05D008311 ORTHO05D010526 1.7e-119 433.7 400 58.2
Duzib128G1797 Durio zibethinus HOM05D008311 ORTHO05D010526 8.5e-119 431.4 354 63.3
Gohir.D08G241300 Gossypium hirsutum HOM05D008311 ORTHO05D010526 1.4e-118 430.6 400 61.5
MD07G1310100 Malus domestica HOM05D008311 ORTHO05D010526 5.5e-118 428.7 354 63.0
Prupe.2G328000 Prunus persica HOM05D008311 ORTHO05D010526 2.2e-114 416.8 336 64.6
Sed0001927 Sechium edule HOM05D008311 ORTHO05D010526 3.1e-113 412.9 370 57.6
Eucgr.A02984 Eucalyptus grandis HOM05D008311 ORTHO05D010526 7.0e-113 411.8 356 61.5
CDE11G1038 Ceratophyllum demersum HOM05D008311 ORTHO05D010526 2.9e-111 406.4 435 51.3
FAN10G1178 Fragaria x ananassa HOM05D008311 ORTHO05D010526 2.9e-111 406.4 346 60.1
AUR62028199 Chenopodium quinoa HOM05D008311 ORTHO05D010526 2.5e-110 403.3 354 59.6
AUR62002082 Chenopodium quinoa HOM05D008311 ORTHO05D010526 1.6e-109 400.6 351 58.7
Atru.chr12.1923 Acer truncatum HOM05D008311 ORTHO05D010526 6.1e-109 398.7 388 56.4
CsaV3_2G036620 Cucumis sativus L. HOM05D008311 ORTHO05D010526 1.3e-106 391.0 332 59.9
CDE11G1017 Ceratophyllum demersum HOM05D008311 ORTHO05D010526 8.2e-106 388.3 385 51.4
COL.COLO4_15199 Corchorus olitorius HOM05D008311 ORTHO05D010526 8.2e-106 388.3 351 60.1
ATR0665G332 Amborella trichopoda HOM05D008311 ORTHO05D010526 2.4e-105 386.7 380 55.3
Lsat_1_v5_gn_8_108920 Lactuca sativa HOM05D008311 ORTHO05D010526 2.3e-100 370.2 391 52.2
ClCG09G017160 Citrullus lanatus HOM05D008311 ORTHO05D010526 1.5e-99 367.5 334 56.9
THA.LOC104821739 Tarenaya hassleriana HOM05D008311 ORTHO05D010526 2.0e-99 367.1 352 56.2
HPP92_005385 Vanilla planifolia HOM05D008311 ORTHO05D010526 4.8e-98 362.5 382 51.6
DCAR_020420 Daucus carota HOM05D008311 ORTHO05D010526 3.0e-92 343.2 357 53.5
Lj3A885T48 Lonicera japonica HOM05D008311 ORTHO05D010526 1.2e-91 341.3 371 53.4
Zm00001eb429910 Zea mays HOM05D008311 ORTHO05D010526 2.2e-90 337.0 355 49.3
HPP92_009011 Vanilla planifolia HOM05D008311 ORTHO05D010526 8.6e-87 325.1 397 48.1
FAN03G2372 Fragaria x ananassa HOM05D008311 ORTHO05D010526 1.6e-85 320.9 363 49.9
EL10Ac3g05056 Beta vulgaris HOM05D008311 ORTHO05D010526 3.2e-81 306.6 400 44.0
RcHm_v2.0_Chr1g0384481 Rosa chinensis HOM05D008311 ORTHO05D010526 8.6e-79 298.5 299 54.5
Os04g0592500 Oryza sativa ssp. japonica HOM05D008311 ORTHO05D010526 9.8e-75 285.0 394 41.6
Pp3c16_5410 Physcomitrium patens HOM05D008311 ORTHO05D010526 1.2e-72 278.1 376 40.7
MELO3C021863.2 Cucumis melo HOM05D008311 ORTHO05D010526 6.6e-71 272.3 235 58.3
Zm00001eb201380 Zea mays HOM05D008311 ORTHO05D010526 3.7e-66 256.5 291 48.5
AagrBONN_evm.TU.Sc2ySwM_117.4008 Anthoceros agrestis HOM05D008311 ORTHO05D010526 7.8e-64 248.8 313 45.0
Zm00001eb341760 Zea mays HOM05D008311 ORTHO05D010526 6.4e-50 202.6 245 45.3
SEGI_24543 Sequoiadendron giganteum HOM05D008311 ORTHO05D010526 8.7e-47 192.2 216 49.5
SEGI_12661 Sequoiadendron giganteum HOM05D008311 ORTHO05D010526 3.9e-31 140.2 215 42.3
Zm00001eb072300 Zea mays HOM05D008311 ORTHO05D010526 1.6e-29 134.8 179 43.6
SEGI_19325 Sequoiadendron giganteum HOM05D008311 ORTHO05D010526 5.9e-19 99.8 133 48.1
SEGI_38800 Sequoiadendron giganteum HOM05D008311 ORTHO05D010526 3.8e-18 97.1 82 53.7
CSS0045669 Camellia sinensis var. sinensis HOM05D008311 ORTHO05D010526 1.7e-13 81.6 57 66.7
Potri.013G079301 Populus trichocarpa HOM05D008311 ORTHO05D010526 4.8e-13 80.1 61 67.2
Zm00001eb106730 Zea mays HOM05D006823 ORTHO05D008608 1.1e-12 79.0 96 47.9
Dinv07670 Davidia involucrata HOM05D008311 ORTHO05D183374 5.9e-11 73.2 51 68.6
Zm00001eb207330 Zea mays HOM05D008311 ORTHO05D010526 1.3e-10 72.0 98 40.8


User provided reference genes

Program Settings