Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro06524 Vaccinium macrocarpon HOM05D007064 ORTHO05D008772 6.3e-70 267.3 134 100.0
Rhsim03G0222700 Rhododendron simsii HOM05D007064 ORTHO05D008772 5.2e-08 61.6 33 87.9
CSS0020222 Camellia sinensis var. sinensis HOM05D007064 ORTHO05D008772 1.2e-07 60.5 33 84.8
CSS0020425 Camellia sinensis var. sinensis HOM05D007064 ORTHO05D008772 1.2e-07 60.5 33 84.8
Lj1A1033G66 Lonicera japonica HOM05D007064 ORTHO05D008772 3.4e-07 58.9 36 80.6
Sc19g0000100 Simmondsia chinensis HOM05D007064 ORTHO05D008772 3.4e-07 58.9 73 47.9
MD13G1202900 Malus domestica HOM05D007064 ORTHO05D008772 4.4e-07 58.5 33 78.8
Thecc.05G215700 Theobroma cacao HOM05D007064 ORTHO05D008772 4.4e-07 58.5 33 81.8
Oeu038089.3 Olea europaea HOM05D007064 ORTHO05D008772 5.8e-07 58.2 36 77.8
Hund09801 Selenicereus undatus HOM05D007064 ORTHO05D000105 5.8e-07 58.2 33 81.8
SGA_v2.0_scaffold44G16901 Striga asiatica HOM05D007064 ORTHO05D008772 5.8e-07 58.2 27 92.6
TAR629G0708 Trochodendron aralioides HOM05D007064 ORTHO05D008772 5.8e-07 58.2 33 81.8
Ciclev10020357m.g Citrus clementina HOM05D007064 ORTHO05D008772 7.6e-07 57.8 33 81.8
Duzib106G1646 Durio zibethinus HOM05D007064 ORTHO05D008772 7.6e-07 57.8 33 81.8
Cpa.g.sc43.98 Carica papaya HOM05D007064 ORTHO05D008772 9.9e-07 57.4 33 78.8
Cfa016048 Carpinus fangiana HOM05D007064 ORTHO05D008772 9.9e-07 57.4 37 70.3
Eucgr.K00080 Eucalyptus grandis HOM05D007064 ORTHO05D008772 9.9e-07 57.4 33 78.8
SalBow4G1678 Salvia bowleyana HOM05D007064 ORTHO05D008772 9.9e-07 57.4 73 45.2
CANSAT78G1989 Cannabis sativa HOM05D007064 ORTHO05D008772 1.3e-06 57.0 27 92.6
CiPaw.05G216200 Carya illinoinensis HOM05D007064 ORTHO05D008772 1.3e-06 57.0 33 78.8
AUR62002078 Chenopodium quinoa HOM05D007064 ORTHO05D008772 1.3e-06 57.0 28 89.3
ECA238G0775 Erigeron canadensis HOM05D007064 ORTHO05D008772 1.3e-06 57.0 33 78.8
Migut.F00087 Erythranthe guttata HOM05D007064 ORTHO05D008772 1.3e-06 57.0 27 92.6
Lalb_Chr09g0320151 Lupinus albus HOM05D007064 ORTHO05D008772 1.3e-06 57.0 33 78.8
SalBow4G1574 Salvia bowleyana HOM05D007064 ORTHO05D008772 1.3e-06 57.0 27 92.6
Ah.04g156400 Amaranthus hybridus HOM05D007064 ORTHO05D008772 1.7e-06 56.6 33 78.8
EL10Ac3g05060 Beta vulgaris HOM05D007064 ORTHO05D008772 1.7e-06 56.6 33 78.8
Nitab4.5_0000021g0660 Nicotiana tabacum HOM05D007064 ORTHO05D008772 1.7e-06 56.6 37 70.3
Nitab4.5_0004530g0030 Nicotiana tabacum HOM05D007064 ORTHO05D008772 2.9e-06 55.8 33 78.8
Peaxi162Scf00516g00675 Petunia axillaris HOM05D007064 ORTHO05D008772 2.9e-06 55.8 33 78.8
Phvul.002G040600 Phaseolus vulgaris HOM05D007064 ORTHO05D008772 2.9e-06 55.8 33 75.8
QL09p023233 Quercus lobata HOM05D007064 ORTHO05D008772 2.9e-06 55.8 27 88.9
Solyc03g097130.3 Solanum lycopersicum HOM05D007064 ORTHO05D008772 2.9e-06 55.8 33 78.8
Sopen03g027870 Solanum pennellii HOM05D007064 ORTHO05D008772 2.9e-06 55.8 33 78.8
PGSC0003DMG400003147 Solanum tuberosum HOM05D007064 ORTHO05D008772 2.9e-06 55.8 33 78.8
GSVIVG01024376001 Vitis vinifera HOM05D007064 ORTHO05D008772 2.9e-06 55.8 33 78.8
Lsat_1_v5_gn_2_95061 Lactuca sativa HOM05D007064 ORTHO05D008772 3.8e-06 55.5 33 75.8
TWI60G1094 Tripterygium wilfordii HOM05D007064 ORTHO05D008772 3.8e-06 55.5 40 67.5
CAN.G1131.22 Capsicum annuum HOM05D007064 ORTHO05D008772 4.9e-06 55.1 33 78.8
Glyma.11G009700 Glycine max HOM05D007064 ORTHO05D008772 4.9e-06 55.1 33 75.8
TWI60G0820 Tripterygium wilfordii HOM05D007064 ORTHO05D008772 4.9e-06 55.1 33 78.8
VMungo1215G2591 Vigna mungo HOM05D007064 ORTHO05D008772 4.9e-06 55.1 33 75.8
Actinidia34318 Actinidia chinensis HOM05D007064 ORTHO05D008772 6.4e-06 54.7 33 78.8
Ca_24438_v3 Cicer arietinum L. HOM05D007064 ORTHO05D008772 6.4e-06 54.7 33 69.7
Gohir.A11G303500 Gossypium hirsutum HOM05D007064 ORTHO05D008772 6.4e-06 54.7 27 88.9
Gohir.D11G318800 Gossypium hirsutum HOM05D007064 ORTHO05D008772 6.4e-06 54.7 27 88.9
Gorai.007G348800 Gossypium raimondii HOM05D007064 ORTHO05D008772 6.4e-06 54.7 27 88.9
LjContig00222g0020502 Lotus japonicus HOM05D007064 ORTHO05D008772 6.4e-06 54.7 33 69.7
Haze_00398 Corylus avellana HOM05D007064 ORTHO05D008772 8.4e-06 54.3 33 75.8
FvH4_4g01950 Fragaria vesca HOM05D007064 ORTHO05D008772 8.4e-06 54.3 33 75.8
FAN12G0288 Fragaria x ananassa HOM05D007064 ORTHO05D008772 8.4e-06 54.3 33 75.8
Nn1g00178 Nelumbo nucifera HOM05D007064 ORTHO05D008772 8.4e-06 54.3 27 85.2


User provided reference genes

Program Settings