Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro06510 Vaccinium macrocarpon HOM05D006678 ORTHO05D008388 3.9e-69 264.6 129 100.0
Actinidia18705 Actinidia chinensis HOM05D006678 ORTHO05D008388 2.8e-51 205.3 129 78.3
Actinidia34306 Actinidia chinensis HOM05D006678 ORTHO05D008388 7.0e-50 200.7 131 77.1
Dinv17257 Davidia involucrata HOM05D006678 ORTHO05D008388 2.0e-49 199.1 129 76.7
Dinv29159 Davidia involucrata HOM05D006678 ORTHO05D008388 7.2e-47 190.7 129 73.6
CSS0031072 Camellia sinensis var. sinensis HOM05D006678 ORTHO05D008388 2.2e-43 179.1 140 67.1
Rhsim03G0221400 Rhododendron simsii HOM05D006678 ORTHO05D008388 2.2e-43 179.1 121 79.3
Nitab4.5_0011186g0030 Nicotiana tabacum HOM05D006678 ORTHO05D008388 1.8e-42 176.0 126 70.6
Nitab4.5_0000021g0500 Nicotiana tabacum HOM05D006678 ORTHO05D008388 4.1e-42 174.9 126 69.0
CSS0016806 Camellia sinensis var. sinensis HOM05D006678 ORTHO05D008388 1.0e-40 170.2 146 63.0
MSTRG.26930 Avicennia marina HOM05D006678 ORTHO05D008388 2.9e-40 168.7 125 68.8
Hma1.2p1_1680F.1_g297200 Hydrangea macrophylla HOM05D006678 ORTHO05D008388 2.9e-40 168.7 130 65.4
Peaxi162Scf00133g00723 Petunia axillaris HOM05D006678 ORTHO05D008388 1.5e-39 166.4 125 68.8
SGA_v2.0_scaffold50G18440 Striga asiatica HOM05D006678 ORTHO05D008388 5.5e-39 164.5 125 66.4
Migut.F00948 Erythranthe guttata HOM05D006678 ORTHO05D008388 9.4e-39 163.7 125 67.2
DCAR_009010 Daucus carota HOM05D006678 ORTHO05D008388 1.2e-38 163.3 128 66.4
EL10Ac3g05077 Beta vulgaris HOM05D006678 ORTHO05D008388 4.7e-38 161.4 119 68.1
Lsat_1_v5_gn_9_47480 Lactuca sativa HOM05D006678 ORTHO05D008388 6.1e-38 161.0 125 66.4
TAR629G1392 Trochodendron aralioides HOM05D006678 ORTHO05D008388 6.1e-38 161.0 127 67.7
Oeu031704.1 Olea europaea HOM05D006678 ORTHO05D008388 2.3e-37 159.1 127 65.4
Solyc03g097010.3 Solanum lycopersicum HOM05D006678 ORTHO05D008388 4.0e-37 158.3 120 65.8
Ciclev10023015m.g Citrus clementina HOM05D006678 ORTHO05D008388 5.2e-37 157.9 114 68.4
HanXRQChr03g0088421 Helianthus annuus HOM05D006678 ORTHO05D008388 5.2e-37 157.9 126 65.9
Sopen03g027760 Solanum pennellii HOM05D006678 ORTHO05D008388 5.2e-37 157.9 120 65.8
unitig_90.g27534 Utricularia gibba HOM05D006678 ORTHO05D008388 6.8e-37 157.5 125 65.6
Atru.chr12.1964 Acer truncatum HOM05D006678 ORTHO05D008388 3.4e-36 155.2 114 66.7
CiPaw.06G032600 Carya illinoinensis HOM05D006678 ORTHO05D008388 7.5e-36 154.1 114 70.2
Cc02_g00280 Coffea canephora HOM05D006678 ORTHO05D008388 9.8e-36 153.7 126 64.3
Manes.09G127100 Manihot esculenta HOM05D006678 ORTHO05D008388 1.3e-35 153.3 115 67.0
Nn1g01909 Nelumbo nucifera HOM05D006678 ORTHO05D008388 2.2e-35 152.5 127 66.9
AUR62028176 Chenopodium quinoa HOM05D006678 ORTHO05D008388 3.7e-35 151.8 116 65.5
Duzib177G0619 Durio zibethinus HOM05D006678 ORTHO05D008388 3.7e-35 151.8 112 67.9
AUR62002062 Chenopodium quinoa HOM05D006678 ORTHO05D008388 6.3e-35 151.0 116 65.5
Duzib106G0454 Durio zibethinus HOM05D006678 ORTHO05D008388 6.3e-35 151.0 112 67.9
Hund09791 Selenicereus undatus HOM05D006678 ORTHO05D008388 6.3e-35 151.0 116 66.4
SalBow2G2234 Salvia bowleyana HOM05D006678 ORTHO05D008388 1.1e-34 150.2 125 62.4
Thecc.05G213400 Theobroma cacao HOM05D006678 ORTHO05D008388 1.8e-34 149.4 112 67.9
GSVIVG01024408001 Vitis vinifera HOM05D006678 ORTHO05D008388 1.8e-34 149.4 114 69.3
Aa31LG5G13550 Aethionema arabicum HOM05D006678 ORTHO05D008388 2.4e-34 149.1 120 61.7
Thhalv10021803m.g Eutrema salsugineum HOM05D006678 ORTHO05D008388 2.4e-34 149.1 120 61.7
Gohir.D13G161000 Gossypium hirsutum HOM05D006678 ORTHO05D008388 2.4e-34 149.1 112 67.9
Gorai.013G181600 Gossypium raimondii HOM05D006678 ORTHO05D008388 2.4e-34 149.1 112 67.9
QL09p024031 Quercus lobata HOM05D006678 ORTHO05D008388 2.4e-34 149.1 114 67.5
Sp3g02110 Schrenkiella parvula HOM05D006678 ORTHO05D008388 3.1e-34 148.7 121 61.2
MD01G1236000 Malus domestica HOM05D006678 ORTHO05D008388 4.1e-34 148.3 114 65.8
Prupe.2G326100 Prunus persica HOM05D006678 ORTHO05D008388 4.1e-34 148.3 115 65.2
AL3G12580 Arabidopsis lyrata HOM05D006678 ORTHO05D008388 9.1e-34 147.1 120 60.8
PGR042G1336 Punica granatum HOM05D006678 ORTHO05D008388 9.1e-34 147.1 121 63.6
AT3G03070 Arabidopsis thaliana HOM05D006678 ORTHO05D008388 1.2e-33 146.7 120 60.8
BcaB04g21385 Brassica carinata HOM05D006678 ORTHO05D008388 1.2e-33 146.7 121 62.0
CARHR077080 Cardamine hirsuta HOM05D006678 ORTHO05D008388 1.6e-33 146.4 120 60.8
MELO3C024729.2 Cucumis melo HOM05D006678 ORTHO05D008388 2.0e-33 146.0 115 67.8
Gohir.A13G156100 Gossypium hirsutum HOM05D006678 ORTHO05D008388 2.0e-33 146.0 112 66.1
Carub.0003s0222 Capsella rubella HOM05D006678 ORTHO05D008388 2.7e-33 145.6 120 60.0
FAN03G1679 Fragaria x ananassa HOM05D006678 ORTHO05D008388 4.5e-33 144.8 114 65.8
TWI38G1314 Tripterygium wilfordii HOM05D006678 ORTHO05D008388 4.5e-33 144.8 115 65.2
COL.COLO4_11805 Corchorus olitorius HOM05D006678 ORTHO05D008388 5.9e-33 144.4 112 66.1
ClCG02G007680 Citrullus lanatus HOM05D006678 ORTHO05D008388 7.7e-33 144.1 115 67.0
CsaV3_2G036030 Cucumis sativus L. HOM05D006678 ORTHO05D008388 7.7e-33 144.1 117 67.5
RcHm_v2.0_Chr1g0384211 Rosa chinensis HOM05D006678 ORTHO05D008388 7.7e-33 144.1 114 62.3
THA.LOC104802920 Tarenaya hassleriana HOM05D006678 ORTHO05D008388 1.0e-32 143.7 114 66.7
VMungo1127G1968 Vigna mungo HOM05D006678 ORTHO05D008388 1.7e-32 142.9 114 63.2
ATR0829G044 Amborella trichopoda HOM05D006678 ORTHO05D008388 2.3e-32 142.5 124 62.9
BolC5t35043H Brassica oleracea HOM05D006678 ORTHO05D008388 2.3e-32 142.5 122 59.8
Oeu063732.2 Olea europaea HOM05D006678 ORTHO05D008388 2.3e-32 142.5 180 48.3
C05p63740 Brassica napus HOM05D006678 ORTHO05D008388 2.9e-32 142.1 125 59.2
TWI39G0757 Tripterygium wilfordii HOM05D006678 ORTHO05D008388 2.9e-32 142.1 115 65.2
CDE03G0140 Ceratophyllum demersum HOM05D006678 ORTHO05D008388 3.8e-32 141.7 129 59.7
Medtr4g077807 Medicago truncatula HOM05D006678 ORTHO05D008388 3.8e-32 141.7 115 62.6
CANSAT21G1467 Cannabis sativa HOM05D006678 ORTHO05D008388 5.0e-32 141.4 114 64.9
PSO782G5154 Papaver somniferum HOM05D006678 ORTHO05D008388 5.0e-32 141.4 120 61.7
Phvul.011G020300 Phaseolus vulgaris HOM05D006678 ORTHO05D008388 5.0e-32 141.4 115 64.3
PSO063G3868 Papaver somniferum HOM05D006678 ORTHO05D008388 6.5e-32 141.0 120 62.5
Aqoxy3G02158 Aquilegia oxysepala HOM05D006678 ORTHO05D008388 8.6e-32 140.6 91 71.4
BraA01t04595Z Brassica rapa HOM05D006678 ORTHO05D008388 8.6e-32 140.6 121 60.3
THA.LOC104827215 Tarenaya hassleriana HOM05D006678 ORTHO05D008388 8.6e-32 140.6 114 64.0
TPR.G27187 Trifolium pratense HOM05D006678 ORTHO05D008388 8.6e-32 140.6 115 61.7
FvH4_7g33980 Fragaria vesca HOM05D006678 ORTHO05D008388 1.1e-31 140.2 114 63.2
Psat7g171800 Pisum sativum HOM05D006678 ORTHO05D008388 1.1e-31 140.2 115 61.7
BNapus_Darmor_BZH_scaffold_129p00040 Brassica napus HOM05D006678 ORTHO05D008388 1.5e-31 139.8 121 59.5
Ca_04918_v3 Cicer arietinum L. HOM05D006678 ORTHO05D008388 1.5e-31 139.8 115 62.6
Lalb_Chr01g0000921 Lupinus albus HOM05D006678 ORTHO05D008388 1.5e-31 139.8 112 62.5
Sed0006085 Sechium edule HOM05D006678 ORTHO05D008388 1.5e-31 139.8 114 63.2
arahy.Tifrunner.gnm1.ann1.Z69A25 Arachis hypogaea HOM05D006678 ORTHO05D008388 1.9e-31 139.4 117 63.2
FAN10G1380 Fragaria x ananassa HOM05D006678 ORTHO05D008388 1.9e-31 139.4 114 62.3
Potri.013G082100 Populus trichocarpa HOM05D006678 ORTHO05D008388 1.9e-31 139.4 121 62.8
BolC1t05850H Brassica oleracea HOM05D006678 ORTHO05D008388 2.5e-31 139.0 121 59.5
A05p44110 Brassica napus HOM05D006678 ORTHO05D008388 5.5e-31 137.9 122 58.2
BraSC90t46700Z Brassica rapa HOM05D006678 ORTHO05D008388 5.5e-31 137.9 122 58.2
Glyma.12G017800 Glycine max HOM05D006678 ORTHO05D008388 5.5e-31 137.9 114 62.3
CDE06G2089 Ceratophyllum demersum HOM05D006678 ORTHO05D008388 7.2e-31 137.5 107 66.4
FAN01G1466 Fragaria x ananassa HOM05D006678 ORTHO05D008388 7.2e-31 137.5 114 62.3
Lj3g0002487 Lotus japonicus HOM05D006678 ORTHO05D008388 9.5e-31 137.1 123 61.0
Glyma.11G091800 Glycine max HOM05D006678 ORTHO05D008388 2.1e-30 136.0 117 62.4
Lalb_Chr03g0024411 Lupinus albus HOM05D006678 ORTHO05D008388 3.6e-30 135.2 116 60.3
vmacro22173 Vaccinium macrocarpon HOM05D006678 ORTHO05D008388 3.0e-29 132.1 78 78.2
Sabra13G0070800 Salix brachista HOM05D006678 ORTHO05D008388 5.2e-29 131.3 122 59.0
Gorai.013G182200 Gossypium raimondii HOM05D006678 ORTHO05D008388 3.4e-28 128.6 112 60.7
Os08g0161700 Oryza sativa ssp. japonica HOM05D006678 ORTHO05D008388 3.4e-28 128.6 125 55.2
ECA232G0519 Erigeron canadensis HOM05D006678 ORTHO05D008388 2.8e-27 125.6 103 61.2
Zm00001eb172200 Zea mays HOM05D006678 ORTHO05D008388 6.3e-27 124.4 110 58.2
Haze_00425 Corylus avellana HOM05D006877 ORTHO05D008735 1.2e-25 120.2 108 56.5
Mapoly0006s0269 Marchantia polymorpha HOM05D006678 ORTHO05D008388 1.3e-24 116.7 116 52.6
Ah.13g072760 Amaranthus hybridus HOM05D006678 ORTHO05D008388 5.0e-24 114.8 74 74.3
CAN.G1131.11 Capsicum annuum HOM05D006678 ORTHO05D008388 5.0e-24 114.8 75 69.3
AagrBONN_evm.TU.Sc2ySwM_368.1248 Anthoceros agrestis HOM05D006678 ORTHO05D008388 1.5e-23 113.2 103 54.4
Nitab4.5_0000011g0100 Nicotiana tabacum HOM05D006678 ORTHO05D008388 1.9e-23 112.8 74 70.3
Duzib128G0155 Durio zibethinus HOM05D006678 ORTHO05D008388 7.3e-23 110.9 84 65.5
Pp3c24_2620 Physcomitrium patens HOM05D006678 ORTHO05D008388 1.2e-22 110.2 108 55.6
SEGI_28569 Sequoiadendron giganteum HOM05D006678 ORTHO05D008388 2.1e-22 109.4 73 71.2
SMO239G0055 Selaginella moellendorffii HOM05D006678 ORTHO05D008388 2.8e-22 109.0 81 61.7
Pp3c23_13320 Physcomitrium patens HOM05D006678 ORTHO05D008388 3.4e-20 102.1 111 52.3
Sc06g0002530 Simmondsia chinensis HOM05D002239 ORTHO05D002408 2.4e-18 95.9 68 70.6
Gohir.D13G160300 Gossypium hirsutum HOM05D006678 ORTHO05D008388 2.3e-16 89.4 69 68.1
PRCOL_00006130 Prasinoderma coloniale HOM05D006678 ORTHO05D008388 3.0e-16 89.0 107 49.5
arahy.Tifrunner.gnm1.ann1.GV73NI Arachis hypogaea HOM05D006678 ORTHO05D008388 1.4e-13 80.1 71 66.2
Zm00001eb415610 Zea mays HOM05D006678 ORTHO05D008388 2.6e-12 75.9 64 59.4
Cre03.g178250 Chlamydomonas reinhardtii HOM05D006678 ORTHO05D008388 4.4e-12 75.1 126 40.5
CBR_g6679 Chara braunii HOM05D006678 ORTHO05D008388 1.6e-06 56.6 34 64.7


User provided reference genes

Program Settings