Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro06499 Vaccinium macrocarpon HOM05D002799 ORTHO05D008889 1.1e-90 336.7 170 100.0
Rhsim03G0220500 Rhododendron simsii HOM05D000526 ORTHO05D000956 3.5e-73 278.5 160 87.5
CSS0012005 Camellia sinensis var. sinensis HOM05D002799 ORTHO05D008889 7.5e-68 260.8 160 82.5
CSS0036576 Camellia sinensis var. sinensis HOM05D002799 ORTHO05D008889 7.5e-68 260.8 160 82.5
Dinv29173 Davidia involucrata HOM05D002799 ORTHO05D008889 3.7e-67 258.5 161 80.1
Actinidia08736 Actinidia chinensis HOM05D002799 ORTHO05D008889 2.4e-66 255.8 160 79.4
RcHm_v2.0_Chr1g0383841 Rosa chinensis HOM05D002799 ORTHO05D008889 4.5e-65 251.5 160 76.9
FvH4_7g33591 Fragaria vesca HOM05D002799 ORTHO05D008889 5.9e-65 251.1 160 76.2
FvH4_7g33580 Fragaria vesca HOM05D002799 ORTHO05D008889 1.0e-64 250.4 160 76.2
FAN01G1859 Fragaria x ananassa HOM05D002799 ORTHO05D007076 1.0e-64 250.4 160 76.9
FAN03G1078 Fragaria x ananassa HOM05D002799 ORTHO05D007076 3.8e-64 248.4 160 76.2
FAN10G0267 Fragaria x ananassa HOM05D002799 ORTHO05D007076 6.5e-64 247.7 160 76.2
Prupe.2G323800 Prunus persica HOM05D002799 ORTHO05D008889 1.6e-62 243.0 160 76.9
DCAR_010548 Daucus carota HOM05D002799 ORTHO05D008889 2.1e-62 242.7 161 74.5
Manes.08G164500 Manihot esculenta HOM05D002799 ORTHO05D008889 1.2e-60 236.9 160 73.8
Potri.019G048200 Populus trichocarpa HOM05D002799 ORTHO05D008889 1.2e-60 236.9 160 72.5
Sabra19G0057600 Salix brachista HOM05D002799 ORTHO05D008889 3.4e-60 235.3 161 73.3
QL09p025834 Quercus lobata HOM05D002799 ORTHO05D008889 4.4e-60 235.0 160 74.4
TAR629G0193 Trochodendron aralioides HOM05D002799 ORTHO05D008889 5.7e-60 234.6 158 73.4
MD07G1305700 Malus domestica HOM05D002799 ORTHO05D008889 7.5e-60 234.2 160 74.4
Haze_00591 Corylus avellana HOM05D002799 ORTHO05D008889 9.8e-60 233.8 160 75.0
Oeu053393.1 Olea europaea HOM05D002799 ORTHO05D008889 2.8e-59 232.3 157 73.2
Thecc.04G001600 Theobroma cacao HOM05D002799 ORTHO05D008889 2.8e-59 232.3 158 72.8
GSVIVG01024450001 Vitis vinifera HOM05D002799 ORTHO05D008889 2.8e-59 232.3 161 72.0
Cc05_g12950 Coffea canephora HOM05D002799 ORTHO05D008889 3.7e-59 231.9 155 72.3
CiPaw.05G237000 Carya illinoinensis HOM05D002799 ORTHO05D008889 4.9e-59 231.5 155 74.8
CANSAT21G1155 Cannabis sativa HOM05D002799 ORTHO05D008889 1.1e-58 230.3 160 73.1
PGSC0003DMG400024993 Solanum tuberosum HOM05D002799 ORTHO05D008889 1.4e-58 229.9 156 72.4
Nn1g02011 Nelumbo nucifera HOM05D002799 ORTHO05D008889 1.8e-58 229.6 158 74.1
Nitab4.5_0000207g0420 Nicotiana tabacum HOM05D002799 ORTHO05D008889 1.8e-58 229.6 156 71.8
Nitab4.5_0002229g0090 Nicotiana tabacum HOM05D002799 ORTHO05D008889 3.1e-58 228.8 156 71.2
Duzib133G0126 Durio zibethinus HOM05D002799 ORTHO05D008889 4.1e-58 228.4 163 71.2
ECA236G2689 Erigeron canadensis HOM05D002799 ORTHO05D008889 4.1e-58 228.4 161 70.8
Sopen10g002540 Solanum pennellii HOM05D002799 ORTHO05D008889 4.1e-58 228.4 156 71.8
CAN.G1110.21 Capsicum annuum HOM05D002799 ORTHO05D008889 5.4e-58 228.0 155 72.9
Nn3g19277 Nelumbo nucifera HOM05D002799 ORTHO05D008889 1.2e-57 226.9 154 72.1
Eucgr.K03383 Eucalyptus grandis HOM05D002799 ORTHO05D008889 3.5e-57 225.3 158 72.2
Migut.M01834 Erythranthe guttata HOM05D002799 ORTHO05D008889 4.5e-57 224.9 158 70.3
Lj1P1032T28 Lonicera japonica HOM05D002799 ORTHO05D008889 1.7e-56 223.0 155 72.3
Ciclev10032834m.g Citrus clementina HOM05D002799 ORTHO05D008889 2.9e-56 222.2 155 71.0
MSTRG.17884 Avicennia marina HOM05D002799 ORTHO05D008889 5.0e-56 221.5 158 70.9
Gohir.D11G175400 Gossypium hirsutum HOM05D002799 ORTHO05D008889 8.6e-56 220.7 160 68.8
Gorai.007G188000 Gossypium raimondii HOM05D002799 ORTHO05D008889 8.6e-56 220.7 160 68.8
Lsat_1_v5_gn_5_146100 Lactuca sativa HOM05D002799 ORTHO05D008889 1.9e-55 219.5 161 70.2
Peaxi162Scf00257g00081 Petunia axillaris HOM05D002799 ORTHO05D008889 1.9e-55 219.5 152 73.0
TWI60G0329 Tripterygium wilfordii HOM05D002799 ORTHO05D008889 1.9e-55 219.5 147 72.8
Gohir.A11G169200 Gossypium hirsutum HOM05D002799 ORTHO05D008889 5.6e-55 218.0 160 68.1
Atru.chr12.2012 Acer truncatum HOM05D002799 ORTHO05D008889 4.7e-54 214.9 158 67.1
Lsat_1_v5_gn_8_74380 Lactuca sativa HOM05D002799 ORTHO05D008889 1.0e-53 213.8 163 67.5
Sed0001745 Sechium edule HOM05D002799 ORTHO05D008889 5.2e-53 211.5 160 68.1
MELO3C005426.2 Cucumis melo HOM05D002799 ORTHO05D008889 8.9e-53 210.7 157 66.9
Medtr8g063470 Medicago truncatula HOM05D002799 ORTHO05D008889 1.2e-52 210.3 158 65.2
TPR.G670 Trifolium pratense HOM05D002799 ORTHO05D008889 1.3e-51 206.8 158 64.6
Lalb_Chr09g0335071 Lupinus albus HOM05D002799 ORTHO05D008889 2.2e-51 206.1 158 63.9
THA.LOC104803694 Tarenaya hassleriana HOM05D002799 ORTHO05D008889 3.7e-51 205.3 159 63.5
unitig_746.g26651 Utricularia gibba HOM05D002799 ORTHO05D008889 3.7e-51 205.3 158 64.6
SGA_v2.0_scaffold70G23573 Striga asiatica HOM05D002799 ORTHO05D008889 4.9e-51 204.9 159 66.7
CsaV3_5G005340 Cucumis sativus L. HOM05D002799 ORTHO05D008889 6.4e-51 204.5 154 66.2
Carub.0003s3061 Capsella rubella HOM05D002799 ORTHO05D008889 1.8e-50 203.0 156 62.8
Lj4g0019925 Lotus japonicus HOM05D002799 ORTHO05D008889 1.8e-50 203.0 158 62.0
EL10Ac3g05099 Beta vulgaris HOM05D002799 ORTHO05D008889 1.6e-49 199.9 155 63.2
AL3G49530 Arabidopsis lyrata HOM05D002799 ORTHO05D008889 2.0e-49 199.5 156 62.2
BcaB07g31750 Brassica carinata HOM05D002799 ORTHO05D008889 3.5e-49 198.7 156 62.8
Glyma.18G134600 Glycine max HOM05D002799 ORTHO05D008889 3.5e-49 198.7 155 61.9
arahy.Tifrunner.gnm1.ann1.LMI616 Arachis hypogaea HOM05D002799 ORTHO05D008889 4.6e-49 198.4 156 63.5
Ah.04g157280 Amaranthus hybridus HOM05D002799 ORTHO05D008889 1.0e-48 197.2 157 59.2
AT2G16790 Arabidopsis thaliana HOM05D002799 ORTHO05D008889 1.0e-48 197.2 156 61.5
arahy.Tifrunner.gnm1.ann1.10QB4Z Arachis hypogaea HOM05D002799 ORTHO05D008889 1.3e-48 196.8 156 63.5
AUR62028150 Chenopodium quinoa HOM05D002799 ORTHO05D008889 1.3e-48 196.8 156 63.5
arahy.Tifrunner.gnm1.ann1.31RF02 Arachis hypogaea HOM05D002799 ORTHO05D008889 2.3e-48 196.1 156 63.5
arahy.Tifrunner.gnm1.ann1.B4EAVD Arachis hypogaea HOM05D002799 ORTHO05D008889 2.3e-48 196.1 156 63.5
BcaC04g23004 Brassica carinata HOM05D002799 ORTHO05D008889 2.3e-48 196.1 159 59.1
C09p13130 Brassica napus HOM05D002799 ORTHO05D008889 2.3e-48 196.1 159 59.1
BolC9t54208H Brassica oleracea HOM05D002799 ORTHO05D008889 2.3e-48 196.1 159 59.1
CARHR107040 Cardamine hirsuta HOM05D002799 ORTHO05D008889 3.0e-48 195.7 156 61.5
Sp3g29930 Schrenkiella parvula HOM05D002799 ORTHO05D008889 6.6e-48 194.5 157 61.1
A09p11140 Brassica napus HOM05D002799 ORTHO05D008889 1.1e-47 193.7 159 57.9
BraA09t36756Z Brassica rapa HOM05D002799 ORTHO05D008889 1.1e-47 193.7 159 57.9
Glyma.08G289900 Glycine max HOM05D002799 ORTHO05D008889 4.3e-47 191.8 155 60.6
Thhalv10022876m.g Eutrema salsugineum HOM05D002799 ORTHO05D008889 7.3e-47 191.0 157 61.8
Aa31LG8G14030 Aethionema arabicum HOM05D002799 ORTHO05D008889 1.6e-46 189.9 156 59.0
Solyc10g006600.4 Solanum lycopersicum HOM05D002799 ORTHO05D008889 8.0e-46 187.6 120 75.0
VMungo0251G2787 Vigna mungo HOM05D002799 ORTHO05D008889 8.0e-46 187.6 155 59.4
Phvul.003G054200 Phaseolus vulgaris HOM05D002799 ORTHO05D008889 1.4e-45 186.8 155 58.7
Aqoxy7G00884 Aquilegia oxysepala HOM05D002799 ORTHO05D008889 6.8e-45 184.5 139 65.5
Phvul.003G053900 Phaseolus vulgaris HOM05D002799 ORTHO05D008889 8.9e-45 184.1 155 58.1
PSO717G0064 Papaver somniferum HOM05D002799 ORTHO05D008889 3.4e-44 182.2 180 56.7
ClCG01G005050 Citrullus lanatus HOM05D002799 ORTHO05D008889 4.4e-44 181.8 135 67.4
PSO675G5486 Papaver somniferum HOM05D002799 ORTHO05D008889 1.3e-43 180.3 180 55.6
COL.COLO4_19775 Corchorus olitorius HOM05D002799 ORTHO05D008889 8.3e-43 177.6 132 67.4
Os06g0114650 Oryza sativa ssp. japonica HOM05D002799 ORTHO05D008889 5.4e-42 174.9 162 54.3
Rhsim03G0164800 Rhododendron simsii HOM05D002799 ORTHO05D008889 4.6e-41 171.8 103 85.4
Ca_14681_v3 Cicer arietinum L. HOM05D002799 ORTHO05D008889 1.9e-39 166.4 130 63.1
Psat4g127040 Pisum sativum HOM05D002799 ORTHO05D008889 1.9e-39 166.4 130 62.3
TPR.G26908 Trifolium pratense HOM05D002799 ORTHO05D008889 1.9e-39 166.4 122 65.6
PGR004G1571 Punica granatum HOM05D002799 ORTHO05D008889 2.1e-38 162.9 129 63.6
Sc19g0000240 Simmondsia chinensis HOM05D002799 ORTHO05D008889 2.8e-38 162.5 132 60.6
ATR0829G224 Amborella trichopoda HOM05D002799 ORTHO05D008889 1.8e-37 159.8 182 47.8
Mapoly0046s0106 Marchantia polymorpha HOM05D002799 ORTHO05D008889 3.2e-34 149.1 159 50.9
AagrBONN_evm.TU.Sc2ySwM_362.1504 Anthoceros agrestis HOM05D002799 ORTHO05D008889 5.1e-32 141.7 165 45.5
MD01G1233600 Malus domestica HOM05D002799 ORTHO05D008889 3.6e-30 135.6 83 75.9
PSO675G4133 Papaver somniferum HOM05D002799 ORTHO05D008889 2.9e-27 125.9 151 49.0
Pp3c5_2750 Physcomitrium patens HOM05D002799 ORTHO05D008889 4.9e-27 125.2 181 40.9
SMO174G0264 Selaginella moellendorffii HOM05D002799 ORTHO05D008889 8.4e-27 124.4 154 44.2
SHI03438 Sapria himalayana HOM05D002799 ORTHO05D008889 7.1e-26 121.3 128 50.8
HPP92_002455 Vanilla planifolia HOM05D002799 ORTHO05D008889 6.0e-25 118.2 136 46.3
BcaB03g16409 Brassica carinata HOM05D002799 ORTHO05D008889 1.1e-18 97.4 107 48.6
C07p06790 Brassica napus HOM05D002799 ORTHO05D008889 1.0e-16 90.9 132 40.9
PRCOL_00003203 Prasinoderma coloniale HOM05D002799 ORTHO05D008889 3.0e-16 89.4 161 37.3
Cre08.g385750 Chlamydomonas reinhardtii HOM05D002799 ORTHO05D008889 2.5e-15 86.3 161 32.3
MCO08G110 Micromonas commoda HOM05D002799 ORTHO05D008889 3.6e-14 82.4 121 38.8
HanXRQChr10g0305151 Helianthus annuus HOM05D002799 ORTHO05D008889 4.0e-13 79.0 48 77.1
Cfa026682 Carpinus fangiana HOM05D002799 ORTHO05D008889 3.4e-12 75.9 138 34.8
Ca_28676_v3 Cicer arietinum L. HOM05D002799 ORTHO05D008889 4.5e-12 75.5 131 35.1


User provided reference genes

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