Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro06481 Vaccinium macrocarpon HOM05D006780 ORTHO05D008455 1.9e-158 562.4 271 100.0
Rhsim03G0219000 Rhododendron simsii HOM05D006780 ORTHO05D008455 5.3e-124 448.0 279 80.6
CSS0033689 Camellia sinensis var. sinensis HOM05D006780 ORTHO05D008455 6.5e-106 387.9 271 72.0
Lj3A891T47 Lonicera japonica HOM05D006780 ORTHO05D008455 8.4e-106 387.5 276 71.0
Actinidia34294 Actinidia chinensis HOM05D006780 ORTHO05D008455 2.4e-100 369.4 271 67.2
Actinidia08727 Actinidia chinensis HOM05D006780 ORTHO05D008455 5.3e-100 368.2 271 68.6
SalBow2G3389 Salvia bowleyana HOM05D006780 ORTHO05D008455 4.2e-97 358.6 272 66.5
Dinv29183 Davidia involucrata HOM05D006780 ORTHO05D008455 2.3e-95 352.8 269 65.1
Lsat_1_v5_gn_8_3841 Lactuca sativa HOM05D006780 ORTHO05D008455 6.7e-95 351.3 275 66.2
HanXRQChr08g0225871 Helianthus annuus HOM05D006780 ORTHO05D008455 4.3e-94 348.6 279 65.2
Migut.F00963 Erythranthe guttata HOM05D006780 ORTHO05D008455 7.4e-94 347.8 272 64.0
Hma1.2p1_0115F.1_g055870 Hydrangea macrophylla HOM05D006780 ORTHO05D008455 1.3e-93 347.1 236 72.0
Hma1.2p1_0115F.1_g055860 Hydrangea macrophylla HOM05D006780 ORTHO05D008455 1.7e-93 346.7 273 64.8
Cfa013613 Carpinus fangiana HOM05D006780 ORTHO05D008455 2.2e-93 346.3 271 64.6
vmacro10178 Vaccinium macrocarpon HOM05D006780 ORTHO05D008455 2.2e-93 346.3 294 60.5
QL09p026712 Quercus lobata HOM05D006780 ORTHO05D008455 4.8e-93 345.1 277 64.6
Nn6g33682 Nelumbo nucifera HOM05D006780 ORTHO05D008455 8.2e-93 344.4 271 63.5
CiPaw.08G043400 Carya illinoinensis HOM05D006780 ORTHO05D008455 1.1e-92 344.0 277 65.0
MSTRG.17 Avicennia marina HOM05D006780 ORTHO05D008455 3.1e-92 342.4 271 64.6
SGA_v2.0_scaffold165G38216 Striga asiatica HOM05D006780 ORTHO05D008455 3.1e-92 342.4 275 63.3
Nitab4.5_0007683g0020 Nicotiana tabacum HOM05D006780 ORTHO05D008455 1.2e-91 340.5 274 64.6
Cc02_g00520 Coffea canephora HOM05D006780 ORTHO05D008455 1.5e-91 340.1 274 63.5
Atru.chr12.2100 Acer truncatum HOM05D006780 ORTHO05D008455 5.9e-91 338.2 271 62.7
Eucgr.K00108 Eucalyptus grandis HOM05D006780 ORTHO05D008455 5.9e-91 338.2 272 63.6
Nitab4.5_0000011g0110 Nicotiana tabacum HOM05D006780 ORTHO05D008455 2.9e-90 335.9 272 63.2
Thecc.05G208000 Theobroma cacao HOM05D006780 ORTHO05D008455 5.0e-90 335.1 275 62.5
PGR142G1227 Punica granatum HOM05D006780 ORTHO05D008455 1.4e-89 333.6 276 61.6
Manes.09G119100 Manihot esculenta HOM05D006780 ORTHO05D008455 1.9e-89 333.2 272 64.3
TAR629G2389 Trochodendron aralioides HOM05D006780 ORTHO05D008455 1.9e-89 333.2 271 62.4
Gorai.012G029700 Gossypium raimondii HOM05D006780 ORTHO05D008455 4.2e-89 332.0 275 63.3
Gohir.A05G389500 Gossypium hirsutum HOM05D006780 ORTHO05D008455 9.4e-89 330.9 249 66.7
COL.COLO4_34143 Corchorus olitorius HOM05D006780 ORTHO05D008455 2.1e-88 329.7 275 61.5
Gohir.D04G027000 Gossypium hirsutum HOM05D006780 ORTHO05D008455 2.7e-88 329.3 275 62.5
Rhsim09G0211500 Rhododendron simsii HOM05D006780 ORTHO05D008455 2.7e-88 329.3 312 57.1
TAR636G2448 Trochodendron aralioides HOM05D006780 ORTHO05D008455 6.1e-88 328.2 271 60.9
Ciclev10012613m.g Citrus clementina HOM05D006780 ORTHO05D008455 1.8e-87 326.6 271 60.9
Hund14300 Selenicereus undatus HOM05D006780 ORTHO05D008455 6.7e-87 324.7 285 56.8
CANSAT21G1469 Cannabis sativa HOM05D006780 ORTHO05D008455 2.6e-86 322.8 293 59.7
Sopen07g001650 Solanum pennellii HOM05D006780 ORTHO05D008455 5.7e-86 321.6 273 61.9
Solyc07g005550.4 Solanum lycopersicum HOM05D006780 ORTHO05D008455 9.7e-86 320.9 273 61.5
GSVIVG01024468001 Vitis vinifera HOM05D006780 ORTHO05D008455 9.7e-86 320.9 239 67.4
TWI60G0503 Tripterygium wilfordii HOM05D006780 ORTHO05D008455 3.1e-84 315.8 271 60.1
Peaxi162Scf00542g00012 Petunia axillaris HOM05D006780 ORTHO05D008455 4.1e-84 315.5 271 60.9
Gohir.1Z049572 Gossypium hirsutum HOM05D006780 ORTHO05D008455 2.0e-83 313.2 275 59.3
Gorai.004G260300 Gossypium raimondii HOM05D006780 ORTHO05D008455 2.0e-83 313.2 274 58.8
Sc07g0007970 Simmondsia chinensis HOM05D006780 ORTHO05D008455 1.0e-82 310.8 256 61.7
THA.LOC104805709 Tarenaya hassleriana HOM05D006780 ORTHO05D008455 2.2e-82 309.7 257 62.3
Gohir.A08G223700 Gossypium hirsutum HOM05D006780 ORTHO05D008455 2.9e-82 309.3 275 58.9
DCAR_008997 Daucus carota HOM05D006780 ORTHO05D008455 3.8e-82 308.9 273 57.5
TWI34G0276 Tripterygium wilfordii HOM05D006780 ORTHO05D008455 1.1e-81 307.4 272 59.9
Prupe.2G322900 Prunus persica HOM05D006780 ORTHO05D008455 2.5e-81 306.2 275 58.9
Potri.004G030100 Populus trichocarpa HOM05D006780 ORTHO05D008455 4.2e-81 305.4 297 56.6
Sabra04G0017100 Salix brachista HOM05D006780 ORTHO05D008455 4.2e-81 305.4 294 57.5
Ah.12g058490 Amaranthus hybridus HOM05D006780 ORTHO05D008455 9.4e-81 304.3 277 58.1
Aqoxy3G02533 Aquilegia oxysepala HOM05D006780 ORTHO05D008455 9.4e-81 304.3 272 56.6
arahy.Tifrunner.gnm1.ann1.T66758 Arachis hypogaea HOM05D006780 ORTHO05D008455 9.4e-81 304.3 272 57.7
CAN.G160.70 Capsicum annuum HOM05D006780 ORTHO05D008455 1.2e-80 303.9 271 57.6
unitig_52.g16857 Utricularia gibba HOM05D006780 ORTHO05D008455 1.6e-80 303.5 255 60.8
arahy.Tifrunner.gnm1.ann1.T2A0GP Arachis hypogaea HOM05D006780 ORTHO05D008455 2.1e-80 303.1 272 57.4
RcHm_v2.0_Chr1g0383391 Rosa chinensis HOM05D006780 ORTHO05D008455 2.1e-80 303.1 284 57.0
CiPaw.07G182200 Carya illinoinensis HOM05D006780 ORTHO05D008455 6.7e-79 298.1 223 66.4
Aa31LG2G2290 Aethionema arabicum HOM05D006780 ORTHO05D008455 8.8e-79 297.7 266 57.9
ECA233G5194 Erigeron canadensis HOM05D006780 ORTHO05D008455 1.5e-78 297.0 224 66.5
FAN03G1919 Fragaria x ananassa HOM05D006780 ORTHO05D008455 2.2e-77 293.1 247 60.3
PGSC0003DMG400011181 Solanum tuberosum HOM05D006780 ORTHO05D008455 8.2e-77 291.2 349 48.1
FAN10G0287 Fragaria x ananassa HOM05D006780 ORTHO05D008455 1.4e-76 290.4 247 59.5
ClCG01G004850 Citrullus lanatus HOM05D006780 ORTHO05D008455 3.1e-76 289.3 271 58.3
FAN10G2247 Fragaria x ananassa HOM05D006780 ORTHO05D008455 3.1e-76 289.3 247 59.5
AUR62030415 Chenopodium quinoa HOM05D006780 ORTHO05D008455 4.1e-76 288.9 264 55.7
FvH4_7g33420 Fragaria vesca HOM05D006780 ORTHO05D008455 4.1e-76 288.9 247 59.1
MD01G1232400 Malus domestica HOM05D006780 ORTHO05D008455 4.1e-76 288.9 272 55.9
VMungo1127G1066 Vigna mungo HOM05D006780 ORTHO05D008455 4.1e-76 288.9 282 54.3
AT2G44870 Arabidopsis thaliana HOM05D006780 ORTHO05D008455 7.0e-76 288.1 250 58.8
FAN01G1241 Fragaria x ananassa HOM05D006780 ORTHO05D008455 7.0e-76 288.1 280 55.0
AUR62010478 Chenopodium quinoa HOM05D006780 ORTHO05D008455 2.6e-75 286.2 263 55.1
Thhalv10022468m.g Eutrema salsugineum HOM05D006780 ORTHO05D008455 1.0e-74 284.3 267 55.4
Sed0025589 Sechium edule HOM05D006780 ORTHO05D008455 1.3e-74 283.9 279 55.6
Lj3g0022672 Lotus japonicus HOM05D006780 ORTHO05D008455 2.9e-74 282.7 272 57.0
MD07G1304300 Malus domestica HOM05D006780 ORTHO05D008455 8.5e-74 281.2 275 56.0
BraA02t06361Z Brassica rapa HOM05D006780 ORTHO05D008455 1.5e-73 280.4 244 57.8
MELO3C005448.2 Cucumis melo HOM05D006780 ORTHO05D008455 1.5e-73 280.4 269 55.8
Sp5g19750 Schrenkiella parvula HOM05D006780 ORTHO05D008455 1.5e-73 280.4 249 57.4
Phvul.011G002600 Phaseolus vulgaris HOM05D006780 ORTHO05D008455 1.9e-73 280.0 248 57.7
BcaC03g14678 Brassica carinata HOM05D006780 ORTHO05D008455 3.2e-73 279.3 244 57.4
A02p13050 Brassica napus HOM05D006780 ORTHO05D008455 3.2e-73 279.3 244 57.4
BolC2t08258H Brassica oleracea HOM05D006780 ORTHO05D008455 3.2e-73 279.3 244 57.4
C02p21190 Brassica napus HOM05D006780 ORTHO05D008455 1.8e-71 273.5 249 56.2
CsaV3_5G005070 Cucumis sativus L. HOM05D006780 ORTHO05D008455 1.8e-71 273.5 269 53.9
Glyma.12G002200 Glycine max HOM05D006780 ORTHO05D008455 2.3e-71 273.1 256 55.9
AL2G19830 Arabidopsis lyrata HOM05D006780 ORTHO05D008455 4.0e-71 272.3 268 53.7
BcaB05g24083 Brassica carinata HOM05D006780 ORTHO05D008455 4.0e-71 272.3 250 56.0
Glyma.09G234600 Glycine max HOM05D006780 ORTHO05D008455 2.0e-70 270.0 270 53.0
Medtr4g033475 Medicago truncatula HOM05D006780 ORTHO05D008455 3.3e-70 269.2 252 55.2
Ca_19681_v3 Cicer arietinum L. HOM05D006780 ORTHO05D008455 9.7e-70 267.7 220 60.9
PSO063G3320 Papaver somniferum HOM05D006780 ORTHO05D008455 9.7e-70 267.7 242 55.8
Dinv17273 Davidia involucrata HOM05D006780 ORTHO05D008455 1.7e-69 266.9 186 71.0
PSO782G3414 Papaver somniferum HOM05D006780 ORTHO05D008455 1.7e-69 266.9 242 55.8
Carub.0002s1056 Capsella rubella HOM05D006780 ORTHO05D008455 2.2e-69 266.5 285 51.2
CDE02G2736 Ceratophyllum demersum HOM05D006780 ORTHO05D008455 3.7e-69 265.8 280 50.0
Psat7g145160 Pisum sativum HOM05D006780 ORTHO05D008455 1.4e-68 263.8 271 50.9
TPR.G31925 Trifolium pratense HOM05D006780 ORTHO05D008455 7.7e-67 258.1 233 56.2
CDE11G0765 Ceratophyllum demersum HOM05D006780 ORTHO05D008455 7.2e-65 251.5 280 48.6
EL10Ac5g12581 Beta vulgaris HOM05D006780 ORTHO05D008455 2.1e-64 250.0 299 45.5
CDE02G3388 Ceratophyllum demersum HOM05D006780 ORTHO05D008455 1.0e-63 247.7 275 47.6
CARHR056600 Cardamine hirsuta HOM05D006780 ORTHO05D008455 9.8e-62 241.1 277 48.4
Duzib128G1164 Durio zibethinus HOM05D006780 ORTHO05D008455 1.1e-60 237.7 275 49.8
Duzib177G1050 Durio zibethinus HOM05D006780 ORTHO05D008455 7.7e-59 231.5 274 47.8
Zm00001eb024190 Zea mays HOM05D006780 ORTHO05D008455 7.7e-59 231.5 271 45.8
ATR0829G223 Amborella trichopoda HOM05D006780 ORTHO05D008455 3.6e-56 222.6 216 49.5
CDE11G0053 Ceratophyllum demersum HOM05D006780 ORTHO05D008455 8.3e-53 211.5 275 42.2
HPP92_025668 Vanilla planifolia HOM05D006780 ORTHO05D008455 4.4e-46 189.1 277 42.6
Cpa.g.sc39.45 Carica papaya HOM05D006780 ORTHO05D008455 2.1e-35 153.7 172 51.7
SMO301G0031 Selaginella moellendorffii HOM05D006780 ORTHO05D008455 1.7e-34 150.6 213 35.2
CSS0031860 Camellia sinensis var. sinensis HOM05D001955 ORTHO05D001917 3.3e-33 146.4 117 66.7
Pp3c8_4270 Physcomitrium patens HOM05D006780 ORTHO05D008455 9.5e-33 144.8 213 32.9
Mapoly0133s0055 Marchantia polymorpha HOM05D006780 ORTHO05D008455 1.0e-26 124.8 175 35.4
CBR_g642 Chara braunii HOM05D006780 ORTHO05D008455 2.3e-18 97.1 206 28.6
Os10g0569000 Oryza sativa ssp. japonica HOM05D006780 ORTHO05D008455 5.3e-15 85.9 100 51.0


User provided reference genes

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