Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro06469 Vaccinium macrocarpon HOM05D004143 ORTHO05D004816 0.0e+00 1409.0 718 100.0
vmacro06470 Vaccinium macrocarpon HOM05D004143 ORTHO05D004816 9.3e-261 903.7 474 93.5
Rhsim03G0218000 Rhododendron simsii HOM05D004143 ORTHO05D004816 5.8e-247 857.8 465 90.3
Rhsim03G0217900 Rhododendron simsii HOM05D004143 ORTHO05D004816 1.9e-237 826.2 475 85.9
Actinidia34284 Actinidia chinensis HOM05D004143 ORTHO05D004816 8.8e-227 790.8 477 81.8
CSS0027564 Camellia sinensis var. sinensis HOM05D004143 ORTHO05D004816 3.7e-225 785.4 477 82.0
Actinidia08713 Actinidia chinensis HOM05D004143 ORTHO05D004816 4.5e-223 778.5 458 82.5
Hma1.2p1_0115F.1_g055680 Hydrangea macrophylla HOM05D004143 ORTHO05D004816 9.1e-216 754.2 475 78.3
DCAR_010563 Daucus carota HOM05D004143 ORTHO05D004816 4.5e-215 751.9 478 77.6
Lj3A892T30 Lonicera japonica HOM05D004143 ORTHO05D004816 5.9e-215 751.5 468 79.3
Actinidia18690 Actinidia chinensis HOM05D004143 ORTHO05D004816 1.3e-214 750.4 475 76.8
TAR375G1015 Trochodendron aralioides HOM05D004143 ORTHO05D004816 5.5e-213 745.0 476 76.7
Oeu017360.1 Olea europaea HOM05D004143 ORTHO05D004816 1.6e-212 743.4 448 80.4
Dinv17282 Davidia involucrata HOM05D004143 ORTHO05D004816 3.6e-212 742.3 477 77.6
TAR629G3485 Trochodendron aralioides HOM05D004143 ORTHO05D004816 5.7e-210 734.9 477 75.5
DCAR_014598 Daucus carota HOM05D004143 ORTHO05D004816 1.3e-209 733.8 455 77.4
Potri.012G005100 Populus trichocarpa HOM05D004143 ORTHO05D004816 1.2e-207 727.2 445 79.1
Sabra12G0000800 Salix brachista HOM05D004143 ORTHO05D004816 2.0e-207 726.5 445 78.9
Lsat_1_v5_gn_2_3341 Lactuca sativa HOM05D004143 ORTHO05D004816 5.9e-207 724.9 457 77.0
TWI23G0162 Tripterygium wilfordii HOM05D004143 ORTHO05D004816 1.0e-206 724.2 446 78.9
TAR629G1812 Trochodendron aralioides HOM05D004143 ORTHO05D004816 1.0e-206 724.2 461 76.4
GSVIVG01038674001 Vitis vinifera HOM05D004143 ORTHO05D004816 2.2e-206 723.0 467 76.0
CiPaw.05G208300 Carya illinoinensis HOM05D004143 ORTHO05D004816 2.9e-206 722.6 451 78.3
Sabra12G0007100 Salix brachista HOM05D004143 ORTHO05D004816 2.9e-206 722.6 445 78.2
Ciclev10019944m.g Citrus clementina HOM05D004143 ORTHO05D004816 3.8e-206 722.2 460 77.2
MSTRG.23 Avicennia marina HOM05D004143 ORTHO05D004816 5.0e-206 721.8 442 78.5
Manes.01G045000 Manihot esculenta HOM05D004143 ORTHO05D004816 2.5e-205 719.5 454 76.2
Sabra15G0000900 Salix brachista HOM05D004143 ORTHO05D004816 3.2e-205 719.2 443 78.3
Cpa.g.sc3.179 Carica papaya HOM05D004143 ORTHO05D004816 4.2e-205 718.8 456 77.0
CAN.G303.51 Capsicum annuum HOM05D004143 ORTHO05D004816 1.2e-204 717.2 465 76.1
Thecc.05G121800 Theobroma cacao HOM05D004143 ORTHO05D004816 1.2e-204 717.2 447 78.5
PGR142G3661 Punica granatum HOM05D004143 ORTHO05D004816 1.8e-203 713.4 444 78.2
Prupe.2G321300 Prunus persica HOM05D004143 ORTHO05D004816 2.3e-203 713.0 450 76.0
Migut.F00972 Erythranthe guttata HOM05D004143 ORTHO05D004816 3.0e-203 712.6 448 76.6
Cc02_g00660 Coffea canephora HOM05D004143 ORTHO05D004816 4.0e-203 712.2 446 76.9
PSO063G4813 Papaver somniferum HOM05D004143 ORTHO05D004816 5.2e-203 711.8 471 74.3
COL.COLO4_04975 Corchorus olitorius HOM05D004143 ORTHO05D004816 8.8e-203 711.1 428 79.7
DCAR_020387 Daucus carota HOM05D004143 ORTHO05D004816 1.3e-201 707.2 463 73.4
PSO782G2863 Papaver somniferum HOM05D004143 ORTHO05D004816 1.7e-201 706.8 471 74.1
Cfa016134 Carpinus fangiana HOM05D004143 ORTHO05D004816 2.8e-201 706.1 453 75.3
Nitab4.5_0004582g0010 Nicotiana tabacum HOM05D004143 ORTHO05D004816 3.7e-201 705.7 456 76.1
PGSC0003DMG400000551 Solanum tuberosum HOM05D004143 ORTHO05D004816 3.7e-201 705.7 448 76.8
Sopen03g021740 Solanum pennellii HOM05D004143 ORTHO05D004816 6.3e-201 704.9 446 76.9
FAN10G3640 Fragaria x ananassa HOM05D004143 ORTHO05D004816 1.1e-200 704.1 445 77.1
FAN10G4294 Fragaria x ananassa HOM05D004143 ORTHO05D004816 1.1e-200 704.1 445 77.1
MD07G1302200 Malus domestica HOM05D004143 ORTHO05D004816 1.8e-200 703.4 432 77.3
Oeu017361.2 Olea europaea HOM05D004143 ORTHO05D004816 1.8e-200 703.4 448 76.8
Thecc.01G329300 Theobroma cacao HOM05D004143 ORTHO05D004816 1.8e-200 703.4 476 73.1
Nitab4.5_0000021g0150 Nicotiana tabacum HOM05D004143 ORTHO05D004816 3.1e-200 702.6 448 77.2
RcHm_v2.0_Chr1g0383221 Rosa chinensis HOM05D004143 ORTHO05D004816 3.1e-200 702.6 445 76.0
Sed0008601 Sechium edule HOM05D004143 ORTHO05D004816 3.1e-200 702.6 443 76.1
MD01G1230900 Malus domestica HOM05D004143 ORTHO05D004816 4.1e-200 702.2 432 77.5
CSS0024166 Camellia sinensis var. sinensis HOM05D004143 ORTHO05D004816 5.4e-200 701.8 440 77.0
ClCG10G008670 Citrullus lanatus HOM05D004143 ORTHO05D004816 5.4e-200 701.8 441 75.7
Ciclev10024344m.g Citrus clementina HOM05D004143 ORTHO05D004816 7.0e-200 701.4 457 74.0
MELO3C018979.2 Cucumis melo HOM05D004143 ORTHO05D004816 9.1e-200 701.0 441 76.2
FvH4_7g33150 Fragaria vesca HOM05D004143 ORTHO05D004816 2.7e-199 699.5 448 76.6
FvH4_7g33230 Fragaria vesca HOM05D004143 ORTHO05D004816 2.7e-199 699.5 445 76.4
Gohir.A13G001800 Gossypium hirsutum HOM05D004143 ORTHO05D004816 2.7e-199 699.5 448 76.6
SalBow4G1948 Salvia bowleyana HOM05D004143 ORTHO05D004816 4.5e-199 698.7 458 74.2
Hund09750 Selenicereus undatus HOM05D004143 ORTHO05D004816 4.5e-199 698.7 443 75.8
CsaV3_4G009000 Cucumis sativus L. HOM05D004143 ORTHO05D004816 5.9e-199 698.4 441 75.7
CsaV3_4G009010 Cucumis sativus L. HOM05D004143 ORTHO05D004816 7.7e-199 698.0 447 74.7
Haze_00327 Corylus avellana HOM05D004143 ORTHO05D004816 1.0e-198 697.6 442 76.2
HanXRQChr08g0225831 Helianthus annuus HOM05D004143 ORTHO05D004816 1.0e-198 697.6 451 73.4
MELO3C018981.2 Cucumis melo HOM05D004143 ORTHO05D004816 1.3e-198 697.2 443 74.9
CANSAT01G3090 Cannabis sativa HOM05D004143 ORTHO05D004816 1.7e-198 696.8 453 75.3
Gohir.D13G001200 Gossypium hirsutum HOM05D004143 ORTHO05D004816 5.0e-198 695.3 449 75.9
Gorai.013G001100 Gossypium raimondii HOM05D004143 ORTHO05D004816 5.0e-198 695.3 449 75.9
Atru.chr12.2532 Acer truncatum HOM05D004143 ORTHO05D004816 1.1e-197 694.1 435 76.8
arahy.Tifrunner.gnm1.ann1.QS6CEN Arachis hypogaea HOM05D004143 ORTHO05D004816 1.1e-197 694.1 468 72.2
Atru.chr12.2510 Acer truncatum HOM05D004143 ORTHO05D004816 1.5e-197 693.7 433 77.1
CANSAT11G0263 Cannabis sativa HOM05D004143 ORTHO05D004816 1.5e-197 693.7 452 74.6
Duzib138G0998 Durio zibethinus HOM05D004143 ORTHO05D004816 2.5e-197 693.0 470 72.6
FAN03G2936 Fragaria x ananassa HOM05D004143 ORTHO05D004816 2.5e-197 693.0 445 75.3
FAN03G3145 Fragaria x ananassa HOM05D004143 ORTHO05D004816 2.5e-197 693.0 445 75.3
FAN01G2649 Fragaria x ananassa HOM05D004143 ORTHO05D004816 5.5e-197 691.8 445 76.0
arahy.Tifrunner.gnm1.ann1.XXMI3I Arachis hypogaea HOM05D004143 ORTHO05D004816 7.2e-197 691.4 450 74.2
arahy.Tifrunner.gnm1.ann1.JUEJ49 Arachis hypogaea HOM05D004143 ORTHO05D004816 1.2e-196 690.6 450 74.4
TWI23G0209 Tripterygium wilfordii HOM05D004143 ORTHO05D004816 2.8e-196 689.5 467 73.4
EL10Ac3g05140 Beta vulgaris HOM05D004143 ORTHO05D004816 8.0e-196 688.0 429 76.9
MD01G1230800 Malus domestica HOM05D004143 ORTHO05D004816 5.2e-195 685.3 432 75.7
QL09p006127 Quercus lobata HOM05D004143 ORTHO05D004816 2.0e-194 683.3 469 73.1
HPP92_015066 Vanilla planifolia HOM05D004143 ORTHO05D004816 3.4e-194 682.6 471 71.1
ATR0579G031 Amborella trichopoda HOM05D004143 ORTHO05D004816 5.7e-194 681.8 447 73.4
Sed0000759 Sechium edule HOM05D004143 ORTHO05D004816 9.8e-194 681.0 445 74.2
Cfa016133 Carpinus fangiana HOM05D004143 ORTHO05D004816 1.3e-193 680.6 453 73.3
MD01G1230700 Malus domestica HOM05D004143 ORTHO05D004816 1.3e-193 680.6 437 73.0
arahy.Tifrunner.gnm1.ann1.RI5PYK Arachis hypogaea HOM05D004143 ORTHO05D004816 4.9e-193 678.7 430 75.6
arahy.Tifrunner.gnm1.ann1.YIM4MN Arachis hypogaea HOM05D004143 ORTHO05D004816 8.3e-193 677.9 436 74.5
Lj1g0023378 Lotus japonicus HOM05D004143 ORTHO05D004816 1.1e-192 677.6 455 72.5
Glyma.04G226100 Glycine max HOM05D004143 ORTHO05D004816 3.1e-192 676.0 455 73.0
Eucgr.K00891 Eucalyptus grandis HOM05D004143 ORTHO05D004816 5.4e-192 675.2 448 71.7
Medtr3g093270 Medicago truncatula HOM05D004143 ORTHO05D004816 5.4e-192 675.2 442 74.2
Sc19g0000410 Simmondsia chinensis HOM05D004143 ORTHO05D004816 5.4e-192 675.2 433 74.8
THA.LOC104814953 Tarenaya hassleriana HOM05D004143 ORTHO05D004816 9.2e-192 674.5 424 75.7
SGA_v2.0_scaffold44G16868 Striga asiatica HOM05D004143 ORTHO05D004816 2.7e-191 672.9 426 76.8
Psat0s1240g0080 Pisum sativum HOM05D004143 ORTHO05D004816 4.5e-191 672.2 451 72.3
SGA_v2.0_scaffold18G08489 Striga asiatica HOM05D004143 ORTHO05D004816 4.5e-191 672.2 452 73.7
Ca_16836_v3 Cicer arietinum L. HOM05D004143 ORTHO05D004816 7.8e-191 671.4 440 73.2
Lj1g0001658 Lotus japonicus HOM05D004143 ORTHO05D004816 1.0e-190 671.0 441 74.6
Glyma.06G138800 Glycine max HOM05D004143 ORTHO05D004816 1.7e-190 670.2 457 71.1
VMungo1309G1903 Vigna mungo HOM05D004143 ORTHO05D004816 2.3e-190 669.8 441 73.7
Aqoxy5G04387 Aquilegia oxysepala HOM05D004143 ORTHO05D004816 6.6e-190 668.3 463 69.8
Ah.13g070980 Amaranthus hybridus HOM05D004143 ORTHO05D004816 1.1e-189 667.5 447 73.4
Glyma.02G221600 Glycine max HOM05D004143 ORTHO05D004816 1.1e-189 667.5 445 73.0
MBI04_g26128_MAGBIO Magnolia biondii HOM05D004143 ORTHO05D004816 5.6e-189 665.2 437 72.1
Phvul.009G039900 Phaseolus vulgaris HOM05D004143 ORTHO05D004816 1.2e-188 664.1 448 71.7
Eucgr.K00457 Eucalyptus grandis HOM05D004143 ORTHO05D004816 4.7e-188 662.1 406 78.8
Gorai.007G115000 Gossypium raimondii HOM05D004143 ORTHO05D004816 4.7e-188 662.1 457 70.9
Medtr3g093290 Medicago truncatula HOM05D004143 ORTHO05D004816 8.0e-188 661.4 444 71.2
Lalb_Chr11g0067541 Lupinus albus HOM05D004143 ORTHO05D004816 6.8e-187 658.3 459 70.2
Aa31LG7G3020 Aethionema arabicum HOM05D004143 ORTHO05D004816 2.0e-186 656.8 425 73.4
AL1G30350 Arabidopsis lyrata HOM05D004143 ORTHO05D004816 2.6e-186 656.4 439 72.7
Sp1g16050 Schrenkiella parvula HOM05D004143 ORTHO05D004816 9.8e-186 654.4 443 72.2
Thhalv10007558m.g Eutrema salsugineum HOM05D004143 ORTHO05D004816 1.3e-185 654.1 424 74.3
CARHR018600 Cardamine hirsuta HOM05D004143 ORTHO05D004816 2.2e-185 653.3 436 72.7
HanXRQChr15g0472111 Helianthus annuus HOM05D004143 ORTHO05D004816 1.4e-184 650.6 451 69.0
Lalb_Chr23g0272031 Lupinus albus HOM05D004143 ORTHO05D004816 1.4e-184 650.6 449 70.2
Carub.0001s1769 Capsella rubella HOM05D004143 ORTHO05D004816 2.4e-184 649.8 429 73.4
AT1G18000 Arabidopsis thaliana HOM05D004143 ORTHO05D004816 7.0e-184 648.3 425 73.6
AT1G18010 Arabidopsis thaliana HOM05D004143 ORTHO05D004816 7.0e-184 648.3 425 73.6
BolC8t51904H Brassica oleracea HOM05D004143 ORTHO05D004816 2.7e-183 646.4 424 73.6
C08p43580 Brassica napus HOM05D004143 ORTHO05D004816 1.3e-182 644.0 430 72.8
A09p60140 Brassica napus HOM05D004143 ORTHO05D004816 2.3e-182 643.3 424 73.3
BraA09t41383Z Brassica rapa HOM05D004143 ORTHO05D004816 2.3e-182 643.3 424 73.3
SEGI_09338 Sequoiadendron giganteum HOM05D004143 ORTHO05D004816 2.3e-182 643.3 426 71.1
AUR62005954 Chenopodium quinoa HOM05D004143 ORTHO05D004816 5.0e-182 642.1 402 77.1
ClCG10G008690 Citrullus lanatus HOM05D004143 ORTHO05D004816 6.6e-182 641.7 384 78.1
AUR62028110 Chenopodium quinoa HOM05D004143 ORTHO05D004816 1.9e-181 640.2 408 76.0
Eucgr.K00892 Eucalyptus grandis HOM05D004143 ORTHO05D004816 7.3e-181 638.3 449 68.8
VMungo0647G0805 Vigna mungo HOM05D004143 ORTHO05D004816 6.2e-180 635.2 445 70.3
ECA233G4741 Erigeron canadensis HOM05D004143 ORTHO05D000001 8.0e-180 634.8 385 78.4
Phvul.008G188500 Phaseolus vulgaris HOM05D004143 ORTHO05D004816 8.9e-179 631.3 445 69.9
MBI04_g26129_MAGBIO Magnolia biondii HOM05D004143 ORTHO05D004816 6.4e-177 625.2 449 68.2
Nn4g24300 Nelumbo nucifera HOM05D004143 ORTHO05D004816 1.1e-173 614.4 376 78.2
Gohir.A11G102900 Gossypium hirsutum HOM05D004143 ORTHO05D004816 7.3e-173 611.7 429 70.9
ClCG00G006070 Citrullus lanatus HOM05D004143 ORTHO05D004816 1.2e-172 610.9 365 78.4
Zm00001eb418750 Zea mays HOM05D004143 ORTHO05D004816 2.1e-172 610.1 426 69.2
Atru.chr13.384 Acer truncatum HOM05D004143 ORTHO05D004816 3.2e-168 596.3 386 74.9
Atru.chr5.814 Acer truncatum HOM05D004143 ORTHO05D004816 4.1e-168 595.9 386 75.4
Duzib128G1652 Durio zibethinus HOM05D004143 ORTHO05D004816 3.9e-166 589.3 364 78.0
Potri.012G011000 Populus trichocarpa HOM05D004143 ORTHO05D004816 3.6e-156 556.2 437 64.5
MD01G1230600 Malus domestica HOM05D004143 ORTHO05D004816 1.1e-152 544.7 371 69.8
SEGI_21716 Sequoiadendron giganteum HOM05D004143 ORTHO05D004816 8.7e-150 535.0 424 63.0
Gohir.D11G107400 Gossypium hirsutum HOM05D004143 ORTHO05D004816 4.3e-149 532.7 457 61.5
SEGI_05818 Sequoiadendron giganteum HOM05D004143 ORTHO05D004816 3.2e-144 516.5 452 58.0
SMO340G0156 Selaginella moellendorffii HOM05D004143 ORTHO05D004816 3.5e-143 513.1 420 61.4
SMO239G0122 Selaginella moellendorffii HOM05D004143 ORTHO05D004816 3.0e-134 483.4 421 57.0
COL.COLO4_23082 Corchorus olitorius HOM05D004143 ORTHO05D004816 3.7e-132 476.5 462 55.4
unitig_578.g16681 Utricularia gibba HOM05D004143 ORTHO05D004816 6.0e-127 459.1 289 75.8
Os04g0105400 Oryza sativa ssp. japonica HOM05D004143 ORTHO05D004816 1.1e-117 428.3 307 67.4
Mapoly0086s0058 Marchantia polymorpha HOM05D004143 ORTHO05D004816 6.5e-113 412.5 467 48.0
Cc02_g00640 Coffea canephora HOM05D004143 ORTHO05D004816 5.3e-107 392.9 236 79.7
SEGI_06275 Sequoiadendron giganteum HOM05D004143 ORTHO05D004816 9.1e-107 392.1 274 68.6
Pp3c23_3660 Physcomitrium patens HOM05D004143 ORTHO05D004816 1.2e-103 381.7 447 45.2
TPR.G29284 Trifolium pratense HOM05D004143 ORTHO05D004816 7.4e-101 372.5 231 76.6
CDE02G4135 Ceratophyllum demersum HOM05D004143 ORTHO05D004816 4.2e-96 356.7 451 44.1
AagrBONN_evm.TU.Sc2ySwM_344.1928 Anthoceros agrestis HOM05D004143 ORTHO05D004816 2.2e-92 344.4 397 45.3
vmacro20494 Vaccinium macrocarpon HOM05D000022 ORTHO05D002153 1.6e-74 285.0 228 75.4
MBI04_g09827_MAGBIO Magnolia biondii HOM05D004143 ORTHO05D004816 4.7e-71 273.5 270 57.0
Cpa.g.c30701.1 Carica papaya HOM05D004143 ORTHO05D004816 6.4e-68 263.1 146 87.0
Cc02_g00650 Coffea canephora HOM05D004143 ORTHO05D004816 5.8e-61 240.0 166 70.5
Actinidia28288 Actinidia chinensis HOM05D004143 ORTHO05D004816 5.8e-53 213.4 135 76.3
Solyc03g080020.4 Solanum lycopersicum HOM05D004143 ORTHO05D004816 9.9e-45 186.0 443 31.6
SEGI_07746 Sequoiadendron giganteum HOM05D004143 ORTHO05D004816 1.3e-44 185.7 113 77.9
SEGI_40229 Sequoiadendron giganteum HOM05D004143 ORTHO05D004816 4.0e-38 164.1 95 80.0
Peaxi162Scf01026g00266 Petunia axillaris HOM05D004143 ORTHO05D004816 1.7e-36 158.7 462 29.0
GSVIVG01027551001 Vitis vinifera HOM05D000016 ORTHO05D000109 1.8e-25 122.1 73 83.6
VMungo1383G1334 Vigna mungo HOM05D004143 ORTHO05D432805 1.6e-23 115.5 95 60.0
TPR.G22104 Trifolium pratense HOM05D004143 ORTHO05D004816 5.6e-16 90.5 59 69.5
unitig_578.g16680 Utricularia gibba HOM05D004143 ORTHO05D004816 1.3e-12 79.3 59 66.1
vmacro15010 Vaccinium macrocarpon HOM05D001977 ORTHO05D005360 5.5e-11 73.9 120 49.2
vmacro00981 Vaccinium macrocarpon HOM05D000012 ORTHO05D426680 7.1e-11 73.6 312 27.6
Psat3g049200 Pisum sativum HOM05D001886 ORTHO05D005666 1.1e-08 66.2 317 27.1
Hma1.2p1_0105F.1_g050690 Hydrangea macrophylla HOM05D004298 ORTHO05D004816 3.3e-08 64.7 43 69.8
Dinv35628 Davidia involucrata HOM05D001886 ORTHO05D005666 5.7e-08 63.9 196 28.6
Hund10629 Selenicereus undatus HOM05D001886 ORTHO05D005666 5.7e-08 63.9 198 26.3
Hma1.2p1_1050F.1_g251950 Hydrangea macrophylla HOM05D004298 ORTHO05D004816 7.4e-08 63.5 43 67.4
vmacro22556 Vaccinium macrocarpon HOM05D000610 ORTHO05D002583 2.2e-07 62.0 80 50.0
vmacro10492 Vaccinium macrocarpon HOM05D006650 ORTHO05D008401 2.8e-07 61.6 104 41.3
MBI14_g24315_MAGBIO Magnolia biondii HOM05D001886 ORTHO05D005666 6.3e-07 60.5 199 29.1
Os12g0566900 Oryza sativa ssp. japonica HOM05D001886 ORTHO05D005666 8.2e-07 60.1 244 25.4
Mapoly0174s0006 Marchantia polymorpha HOM05D001886 ORTHO05D005666 1.4e-06 59.3 115 27.0
TWI74G1177 Tripterygium wilfordii HOM05D001886 ORTHO05D005666 3.1e-06 58.2 230 23.9


User provided reference genes

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