Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro06347 Vaccinium macrocarpon HOM05D003803 ORTHO05D004456 1.0e-76 290.0 155 100.0
Actinidia39653 Actinidia chinensis HOM05D003803 ORTHO05D004456 1.6e-24 116.7 160 46.9
Dinv25550 Davidia involucrata HOM05D003803 ORTHO05D004456 6.0e-24 114.8 159 49.7
Rhsim05G0007000 Rhododendron simsii HOM05D003803 ORTHO05D004456 1.8e-20 103.2 145 49.7
Rhsim03G0227100 Rhododendron simsii HOM05D003803 ORTHO05D004456 6.9e-20 101.3 167 49.7
Haze_26022 Corylus avellana HOM05D003803 ORTHO05D004456 1.2e-16 90.5 64 76.6
CSS0005199 Camellia sinensis var. sinensis HOM05D003803 ORTHO05D004456 5.1e-15 85.1 168 39.9
COL.COLO4_18088 Corchorus olitorius HOM05D003803 ORTHO05D004456 5.1e-15 85.1 131 49.6
Potri.006G141100 Populus trichocarpa HOM05D003803 ORTHO05D004456 1.9e-14 83.2 48 85.4
Duzib168G2099 Durio zibethinus HOM05D003803 ORTHO05D004456 2.5e-14 82.8 56 78.6
Actinidia30227 Actinidia chinensis HOM05D003803 ORTHO05D004456 3.3e-14 82.4 152 44.1
Ciclev10010564m.g Citrus clementina HOM05D003803 ORTHO05D004456 5.7e-14 81.6 48 87.5
PGSC0003DMG400027887 Solanum tuberosum HOM05D003803 ORTHO05D004456 5.7e-14 81.6 52 73.1
Thecc.09G075700 Theobroma cacao HOM05D003803 ORTHO05D004456 9.7e-14 80.9 56 75.0
Dinv42400 Davidia involucrata HOM05D003803 ORTHO05D004456 1.3e-13 80.5 167 40.1
Nitab4.5_0009541g0010 Nicotiana tabacum HOM05D003803 ORTHO05D004456 1.3e-13 80.5 58 74.1
Sabra06G0110200 Salix brachista HOM05D003803 ORTHO05D004456 1.6e-13 80.1 48 83.3
Duzib187G1358 Durio zibethinus HOM05D003803 ORTHO05D004456 2.8e-13 79.3 56 76.8
Manes.16G094800 Manihot esculenta HOM05D003803 ORTHO05D004456 2.8e-13 79.3 54 74.1
Eucgr.C03259 Eucalyptus grandis HOM05D003803 ORTHO05D004456 3.7e-13 79.0 54 75.9
MD02G1093600 Malus domestica HOM05D003803 ORTHO05D004456 3.7e-13 79.0 56 71.4
Peaxi162Scf00348g00817 Petunia axillaris HOM05D003803 ORTHO05D004456 3.7e-13 79.0 146 40.4
Duzib150G1133 Durio zibethinus HOM05D003803 ORTHO05D004456 6.3e-13 78.2 54 74.1
Migut.L01571 Erythranthe guttata HOM05D003803 ORTHO05D004456 6.3e-13 78.2 74 58.1
Hma1.2p1_0169F.1_g074460 Hydrangea macrophylla HOM05D003803 ORTHO05D004456 8.2e-13 77.8 56 73.2
Atru.chr7.1717 Acer truncatum HOM05D003803 ORTHO05D004456 1.1e-12 77.4 56 71.4
CAN.G595.3 Capsicum annuum HOM05D003803 ORTHO05D004456 1.1e-12 77.4 54 74.1
Gorai.001G015700 Gossypium raimondii HOM05D003803 ORTHO05D004456 1.1e-12 77.4 55 72.7
Prupe.7G197000 Prunus persica HOM05D003803 ORTHO05D004456 1.1e-12 77.4 56 71.4
CiPaw.03G205300 Carya illinoinensis HOM05D003803 ORTHO05D004456 1.4e-12 77.0 56 69.6
CiPaw.04G142500 Carya illinoinensis HOM05D003803 ORTHO05D004456 1.4e-12 77.0 46 80.4
Gorai.013G223800 Gossypium raimondii HOM05D003803 ORTHO05D004456 1.4e-12 77.0 99 51.5
Ca_09305_v3 Cicer arietinum L. HOM05D003803 ORTHO05D004456 1.8e-12 76.6 42 88.1
Cc06_g12240 Coffea canephora HOM05D003803 ORTHO05D004456 1.8e-12 76.6 48 79.2
Gohir.A13G190300 Gossypium hirsutum HOM05D003803 ORTHO05D004456 1.8e-12 76.6 91 53.8
Gohir.D13G196350 Gossypium hirsutum HOM05D003803 ORTHO05D004456 1.8e-12 76.6 91 53.8
MD15G1218900 Malus domestica HOM05D003803 ORTHO05D004456 1.8e-12 76.6 56 71.4
Medtr2g042200 Medicago truncatula HOM05D003803 ORTHO05D004456 1.8e-12 76.6 49 75.5
TWI34G0129 Tripterygium wilfordii HOM05D003803 ORTHO05D004456 1.8e-12 76.6 45 82.2
Gorai.010G088900 Gossypium raimondii HOM05D003803 ORTHO05D004456 2.4e-12 76.3 54 74.1
Gohir.A06G077000 Gossypium hirsutum HOM05D003803 ORTHO05D004456 3.1e-12 75.9 54 74.1
Lalb_Chr07g0181211 Lupinus albus HOM05D003803 ORTHO05D004456 3.1e-12 75.9 73 56.2
Lalb_Chr13g0299401 Lupinus albus HOM05D003803 ORTHO05D004456 3.1e-12 75.9 43 83.7
BcaC03g13781 Brassica carinata HOM05D003803 ORTHO05D004456 4.1e-12 75.5 56 69.6
Cpa.g.sc28.25 Carica papaya HOM05D003803 ORTHO05D004456 4.1e-12 75.5 53 69.8
Sed0026577 Sechium edule HOM05D003803 ORTHO05D004456 4.1e-12 75.5 136 44.1
Glyma.17G048600 Glycine max HOM05D003803 ORTHO05D004456 5.3e-12 75.1 51 74.5
TAR636G1611 Trochodendron aralioides HOM05D003803 ORTHO05D004456 5.3e-12 75.1 48 81.2
Nn8g38618 Nelumbo nucifera HOM05D003803 ORTHO05D004456 6.9e-12 74.7 51 74.5
Nitab4.5_0000343g0290 Nicotiana tabacum HOM05D003803 ORTHO05D004456 6.9e-12 74.7 56 69.6
Solyc07g041980.3 Solanum lycopersicum HOM05D003803 ORTHO05D004456 6.9e-12 74.7 52 69.2
Sopen07g021560 Solanum pennellii HOM05D003803 ORTHO05D004456 6.9e-12 74.7 52 69.2
ClCG03G015020 Citrullus lanatus HOM05D003803 ORTHO05D004456 1.2e-11 73.9 42 85.7
Gohir.A07G015200 Gossypium hirsutum HOM05D003803 ORTHO05D004456 1.2e-11 73.9 46 80.4
Phvul.003G130200 Phaseolus vulgaris HOM05D003803 ORTHO05D004456 1.2e-11 73.9 51 72.5
PGR044G0570 Punica granatum HOM05D003803 ORTHO05D004456 1.2e-11 73.9 46 80.4
TWI63G1012 Tripterygium wilfordii HOM05D003803 ORTHO05D004456 1.2e-11 73.9 48 77.1
Thhalv10014548m.g Eutrema salsugineum HOM05D003803 ORTHO05D004456 1.5e-11 73.6 48 77.1
Gohir.D06G076000 Gossypium hirsutum HOM05D003803 ORTHO05D004456 1.5e-11 73.6 54 72.2
unitig_699.g19272 Utricularia gibba HOM05D003803 ORTHO05D004456 1.5e-11 73.6 47 76.6
VMungo1215G1786 Vigna mungo HOM05D003803 ORTHO05D004456 1.5e-11 73.6 150 40.0
GSVIVG01015067001 Vitis vinifera HOM05D003803 ORTHO05D004456 1.5e-11 73.6 52 73.1
MELO3C015527.2 Cucumis melo HOM05D003803 ORTHO05D004456 2.0e-11 73.2 42 83.3
CsaV3_1G041120 Cucumis sativus L. HOM05D003803 ORTHO05D004456 2.0e-11 73.2 42 83.3
Psat1g134600 Pisum sativum HOM05D003803 ORTHO05D004456 2.0e-11 73.2 49 71.4
Sp6g23850 Schrenkiella parvula HOM05D003803 ORTHO05D004456 2.0e-11 73.2 49 75.5
FvH4_1g08850 Fragaria vesca HOM05D003803 ORTHO05D004456 2.6e-11 72.8 59 66.1
FAN19G2912 Fragaria x ananassa HOM05D003803 ORTHO05D004456 2.6e-11 72.8 59 66.1
FAN23G2205 Fragaria x ananassa HOM05D003803 ORTHO05D004456 2.6e-11 72.8 59 66.1
FAN28G2731 Fragaria x ananassa HOM05D003803 ORTHO05D004456 2.6e-11 72.8 119 43.7
RcHm_v2.0_Chr2g0095321 Rosa chinensis HOM05D003803 ORTHO05D004456 2.6e-11 72.8 59 66.1
TPR.G8075 Trifolium pratense HOM05D003803 ORTHO05D004456 2.6e-11 72.8 49 71.4
CANSAT56G4286 Cannabis sativa HOM05D003803 ORTHO05D004456 3.4e-11 72.4 49 73.5
FAN26G2608 Fragaria x ananassa HOM05D003803 ORTHO05D004456 4.5e-11 72.0 54 70.4
Manes.03G041000 Manihot esculenta HOM05D003803 ORTHO05D004456 4.5e-11 72.0 51 68.6
TAR624G1266 Trochodendron aralioides HOM05D003803 ORTHO05D004456 4.5e-11 72.0 57 70.2
unitig_85.g27251 Utricularia gibba HOM05D003803 ORTHO05D004456 4.5e-11 72.0 42 81.0
MSTRG.26474 Avicennia marina HOM05D003803 ORTHO05D004456 5.9e-11 71.6 57 66.7
SalBow5G3024 Salvia bowleyana HOM05D003803 ORTHO05D004456 5.9e-11 71.6 78 48.7
SalBow5G4531 Salvia bowleyana HOM05D003803 ORTHO05D004456 5.9e-11 71.6 78 48.7
Sed0024871 Sechium edule HOM05D003803 ORTHO05D004456 5.9e-11 71.6 42 83.3
BcaB01g04775 Brassica carinata HOM05D003803 ORTHO05D004456 1.3e-10 70.5 37 89.2
Carub.0006s1897 Capsella rubella HOM05D003803 ORTHO05D004456 1.3e-10 70.5 37 89.2
CARHR192170 Cardamine hirsuta HOM05D003803 ORTHO05D004456 1.3e-10 70.5 37 89.2
MSTRG.10505 Avicennia marina HOM05D003803 ORTHO05D004456 2.2e-10 69.7 52 75.0
FAN26G0190 Fragaria x ananassa HOM05D003803 ORTHO05D004456 2.9e-10 69.3 129 38.8
Hma1.2p1_0179F.1_g079480 Hydrangea macrophylla HOM05D003803 ORTHO05D004456 2.9e-10 69.3 57 64.9
A03p10180 Brassica napus HOM05D003803 ORTHO05D004456 5.0e-10 68.6 49 73.5
BraA03t10328Z Brassica rapa HOM05D003803 ORTHO05D004456 5.0e-10 68.6 49 73.5
Ca_02184_v3 Cicer arietinum L. HOM05D003803 ORTHO05D004456 5.0e-10 68.6 49 67.3
A02p06390 Brassica napus HOM05D003803 ORTHO05D004456 6.5e-10 68.2 39 82.1
A10p19380 Brassica napus HOM05D003803 ORTHO05D004456 6.5e-10 68.2 39 79.5
BolC2t07055H Brassica oleracea HOM05D003803 ORTHO05D004456 6.5e-10 68.2 39 82.1
BraA02t05584Z Brassica rapa HOM05D003803 ORTHO05D004456 6.5e-10 68.2 39 82.1
BraA10t44015Z Brassica rapa HOM05D003803 ORTHO05D004456 6.5e-10 68.2 37 83.8
Aqoxy7G01029 Aquilegia oxysepala HOM05D003803 ORTHO05D004456 8.5e-10 67.8 162 36.4
MELO3C004657.2 Cucumis melo HOM05D003803 ORTHO05D004456 8.5e-10 67.8 158 39.2
Potri.018G062400 Populus trichocarpa HOM05D003803 ORTHO05D004456 8.5e-10 67.8 43 79.1
Nn6g35693 Nelumbo nucifera HOM05D003803 ORTHO05D004456 1.1e-09 67.4 56 64.3
Oeu007415.1 Olea europaea HOM05D003803 ORTHO05D004456 1.1e-09 67.4 53 67.9
C03p11700 Brassica napus HOM05D003803 ORTHO05D004456 1.4e-09 67.0 35 88.6
BolC3t13641H Brassica oleracea HOM05D003803 ORTHO05D004456 1.4e-09 67.0 35 88.6
Hma1.2p1_0291F.1_g114940 Hydrangea macrophylla HOM05D003803 ORTHO05D004456 1.9e-09 66.6 63 61.9
Sed0004681 Sechium edule HOM05D003803 ORTHO05D004456 1.9e-09 66.6 76 51.3
Hund26046 Selenicereus undatus HOM05D003803 ORTHO05D004456 1.9e-09 66.6 101 41.6
BcaB05g22827 Brassica carinata HOM05D003803 ORTHO05D004456 3.2e-09 65.9 151 36.4
THA.LOC104810996 Tarenaya hassleriana HOM05D003803 ORTHO05D004456 4.2e-09 65.5 46 67.4
Oeu060649.1 Olea europaea HOM05D003803 ORTHO05D004456 5.5e-09 65.1 45 68.9
SGA_v2.0_scaffold21G09503 Striga asiatica HOM05D003803 ORTHO05D004456 5.5e-09 65.1 146 41.8
THA.LOC104799616 Tarenaya hassleriana HOM05D003803 ORTHO05D004456 7.2e-09 64.7 56 62.5
Glyma.09G070100 Glycine max HOM05D003803 ORTHO05D004456 1.6e-08 63.5 52 65.4
arahy.Tifrunner.gnm1.ann1.1Y26QK Arachis hypogaea HOM05D003803 ORTHO05D004456 2.1e-08 63.2 50 64.0
arahy.Tifrunner.gnm1.ann1.KPGD7J Arachis hypogaea HOM05D003803 ORTHO05D004456 2.1e-08 63.2 50 64.0
AT5G20635 Arabidopsis thaliana HOM05D003803 ORTHO05D004456 2.7e-08 62.8 33 87.9
Lj4g0012858 Lotus japonicus HOM05D003803 ORTHO05D004456 2.7e-08 62.8 40 72.5
arahy.Tifrunner.gnm1.ann1.AJ3133 Arachis hypogaea HOM05D003803 ORTHO05D004456 4.6e-08 62.0 57 57.9
arahy.Tifrunner.gnm1.ann1.TX00RK Arachis hypogaea HOM05D003803 ORTHO05D004456 4.6e-08 62.0 57 57.9
Glyma.15G178100 Glycine max HOM05D003803 ORTHO05D004456 6.1e-08 61.6 55 61.8
AL6G32180 Arabidopsis lyrata HOM05D003803 ORTHO05D004456 1.0e-07 60.8 33 84.8
QL11p000998 Quercus lobata HOM05D003803 ORTHO05D004456 1.4e-07 60.5 41 70.7
Sc18g0002620 Simmondsia chinensis HOM05D003803 ORTHO05D004456 2.3e-07 59.7 56 66.1
Gohir.D07G014900 Gossypium hirsutum HOM05D003803 ORTHO05D004456 3.9e-07 58.9 37 73.0
Oeu000278.1 Olea europaea HOM05D003803 ORTHO05D004456 3.9e-07 58.9 57 57.9
CsaV3_2G001120 Cucumis sativus L. HOM05D003803 ORTHO05D004456 5.1e-07 58.5 40 67.5
Lj6g0024210 Lotus japonicus HOM05D003803 ORTHO05D004456 5.1e-07 58.5 57 54.4
TPR.G12599 Trifolium pratense HOM05D003803 ORTHO05D004456 5.1e-07 58.5 57 59.6
Psat4g018440 Pisum sativum HOM05D003803 ORTHO05D004456 1.1e-06 57.4 36 77.8
THA.LOC104808881 Tarenaya hassleriana HOM05D003803 ORTHO05D004456 1.1e-06 57.4 44 65.9
Glyma.13G110900 Glycine max HOM05D003803 ORTHO05D004456 7.4e-06 54.7 30 83.3
Medtr4g125015 Medicago truncatula HOM05D003803 ORTHO05D004456 7.4e-06 54.7 27 92.6
ATR0598G175 Amborella trichopoda HOM05D003803 ORTHO05D004456 9.7e-06 54.3 80 37.5


User provided reference genes

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