Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro06343 Vaccinium macrocarpon HOM05D002335 ORTHO05D006282 3.5e-220 768.1 412 100.0
CiPaw.04G143000 Carya illinoinensis HOM05D002335 ORTHO05D006282 1.1e-120 437.6 413 61.7
Cfa002987 Carpinus fangiana HOM05D002335 ORTHO05D006282 1.4e-120 437.2 413 61.5
CSS0005090 Camellia sinensis var. sinensis HOM05D002335 ORTHO05D006282 9.1e-120 434.5 410 66.1
Hma1.2p1_0169F.1_g074510 Hydrangea macrophylla HOM05D002335 ORTHO05D006282 3.5e-119 432.6 399 63.7
SalBow6G4624 Salvia bowleyana HOM05D002335 ORTHO05D006282 3.8e-118 429.1 387 63.3
Ciclev10008755m.g Citrus clementina HOM05D002335 ORTHO05D006282 8.6e-118 427.9 412 62.9
Gohir.D13G196375 Gossypium hirsutum HOM05D002335 ORTHO05D006282 5.6e-117 425.2 412 61.4
Dinv25558 Davidia involucrata HOM05D002335 ORTHO05D006282 8.0e-116 421.4 398 65.8
Dinv42395 Davidia involucrata HOM05D002335 ORTHO05D006282 1.4e-115 420.6 412 63.6
Gorai.013G224300 Gossypium raimondii HOM05D002335 ORTHO05D006282 1.4e-115 420.6 413 61.3
Gohir.A13G190800 Gossypium hirsutum HOM05D002335 ORTHO05D006282 3.4e-114 416.0 412 60.9
SGA_v2.0_scaffold308G48076 Striga asiatica HOM05D002335 ORTHO05D006282 5.7e-114 415.2 360 66.9
Potri.018G056500 Populus trichocarpa HOM05D002335 ORTHO05D006282 1.6e-111 407.1 413 59.8
Glyma.15G177700 Glycine max HOM05D002335 ORTHO05D006282 5.9e-111 405.2 403 59.8
Migut.J00924 Erythranthe guttata HOM05D002335 ORTHO05D006282 7.8e-111 404.8 411 58.2
Actinidia29935 Actinidia chinensis HOM05D002335 ORTHO05D006282 1.0e-110 404.4 411 63.7
FvH4_1g08690 Fragaria vesca HOM05D002335 ORTHO05D006282 8.6e-110 401.4 413 58.8
TPR.G27760 Trifolium pratense HOM05D002335 ORTHO05D006282 2.5e-109 399.8 408 59.8
Rhsim03G0227400 Rhododendron simsii HOM05D002335 ORTHO05D005129 4.3e-109 399.1 456 60.5
Phvul.009G227200 Phaseolus vulgaris HOM05D002335 ORTHO05D006282 7.3e-109 398.3 409 58.2
Glyma.09G069700 Glycine max HOM05D002335 ORTHO05D006282 3.6e-108 396.0 402 61.4
Peaxi162Scf00928g00036 Petunia axillaris HOM05D002335 ORTHO05D006282 3.6e-108 396.0 365 61.9
Sed0016034 Sechium edule HOM05D002335 ORTHO05D006282 8.0e-108 394.8 403 57.6
ClCG03G015070 Citrullus lanatus HOM05D002335 ORTHO05D006282 1.4e-107 394.0 403 58.3
Nitab4.5_0011754g0010 Nicotiana tabacum HOM05D002335 ORTHO05D006282 1.4e-107 394.0 364 63.2
THA.LOC104815334 Tarenaya hassleriana HOM05D002335 ORTHO05D006282 4.0e-107 392.5 403 59.6
Thecc.09G076700 Theobroma cacao HOM05D002335 ORTHO05D006282 4.0e-107 392.5 411 60.8
GSVIVG01015081001 Vitis vinifera HOM05D002335 ORTHO05D006282 6.8e-107 391.7 412 60.4
Lj6g0009960 Lotus japonicus HOM05D002335 ORTHO05D006282 2.6e-106 389.8 413 60.3
VMungo1309G0226 Vigna mungo HOM05D002335 ORTHO05D006282 2.6e-106 389.8 409 57.7
Solyc12g009100.2 Solanum lycopersicum HOM05D002335 ORTHO05D006282 3.4e-106 389.4 402 56.7
PGR044G1875 Punica granatum HOM05D002335 ORTHO05D006282 4.4e-106 389.0 355 64.8
Sopen12g004050 Solanum pennellii HOM05D002335 ORTHO05D006282 4.4e-106 389.0 402 57.0
Nn8g38636 Nelumbo nucifera HOM05D002335 ORTHO05D006282 6.4e-105 385.2 412 58.5
MBI19_g16223_MAGBIO Magnolia biondii HOM05D002335 ORTHO05D006282 1.1e-104 384.4 357 64.1
Duzib187G0696 Durio zibethinus HOM05D002335 ORTHO05D006282 3.2e-104 382.9 413 60.0
Hund26035 Selenicereus undatus HOM05D002335 ORTHO05D006282 4.1e-104 382.5 349 61.9
MD02G1091400 Malus domestica HOM05D002335 ORTHO05D006282 5.4e-104 382.1 413 58.8
COL.COLO4_18096 Corchorus olitorius HOM05D002335 ORTHO05D006282 9.2e-104 381.3 411 60.1
TAR383G0969 Trochodendron aralioides HOM05D002335 ORTHO05D006282 2.0e-103 380.2 408 58.3
TWI34G0307 Tripterygium wilfordii HOM05D002335 ORTHO05D006282 3.5e-103 379.4 416 56.7
Aa31sc133G10 Aethionema arabicum HOM05D002335 ORTHO05D006282 4.6e-103 379.0 403 57.3
HanXRQChr04g0126011 Helianthus annuus HOM05D002335 ORTHO05D006282 6.0e-103 378.6 351 61.0
Haze_26014 Corylus avellana HOM05D002335 ORTHO05D006282 7.8e-103 378.3 303 70.3
Eucgr.C03263 Eucalyptus grandis HOM05D002335 ORTHO05D006282 7.8e-103 378.3 355 61.4
Manes.16G095200 Manihot esculenta HOM05D002335 ORTHO05D006282 7.8e-103 378.3 402 58.2
Eucgr.C03328 Eucalyptus grandis HOM05D002335 ORTHO05D006282 1.7e-102 377.1 403 56.3
ECA236G4601 Erigeron canadensis HOM05D002335 ORTHO05D006282 3.0e-102 376.3 355 58.9
PSO135G0390 Papaver somniferum HOM05D002335 ORTHO05D006282 5.0e-102 375.6 409 54.3
AUR62028934 Chenopodium quinoa HOM05D002335 ORTHO05D006282 2.5e-101 373.2 349 60.2
BcaB06g26879 Brassica carinata HOM05D002335 ORTHO05D006282 3.3e-101 372.9 411 56.7
RcHm_v2.0_Chr2g0095141 Rosa chinensis HOM05D002335 ORTHO05D006282 4.3e-101 372.5 408 57.8
MSTRG.19458 Avicennia marina HOM05D002335 ORTHO05D006282 9.5e-101 371.3 411 57.2
Ca_02205_v3 Cicer arietinum L. HOM05D002335 ORTHO05D006282 1.6e-100 370.5 409 58.4
Carub.0003s2712 Capsella rubella HOM05D002335 ORTHO05D006282 3.6e-100 369.4 411 58.2
Duzib168G0796 Durio zibethinus HOM05D002335 ORTHO05D006282 4.7e-100 369.0 355 63.7
PSO724G0129 Papaver somniferum HOM05D002335 ORTHO05D006282 6.2e-100 368.6 409 53.3
Sabra18G0052300 Salix brachista HOM05D002335 ORTHO05D006282 8.1e-100 368.2 490 50.0
BolC3t13639H Brassica oleracea HOM05D005537 ORTHO05D006776 2.3e-99 366.7 380 55.8
Sp3g24570 Schrenkiella parvula HOM05D002335 ORTHO05D006282 2.3e-99 366.7 409 58.2
FAN28G1803 Fragaria x ananassa HOM05D002335 ORTHO05D006282 6.8e-99 365.2 413 57.1
BcaC06g35950 Brassica carinata HOM05D002335 ORTHO05D006282 1.5e-98 364.0 396 57.3
C07p09370 Brassica napus HOM05D002335 ORTHO05D006282 1.5e-98 364.0 396 57.3
BolC7t41360H Brassica oleracea HOM05D002335 ORTHO05D006282 1.5e-98 364.0 396 57.3
Cc06_g12190 Coffea canephora HOM05D002335 ORTHO05D006282 2.0e-98 363.6 412 56.1
Aqoxy7G04129 Aquilegia oxysepala HOM05D002335 ORTHO05D006282 2.6e-98 363.2 409 56.7
A07p06320 Brassica napus HOM05D002335 ORTHO05D006282 2.6e-98 363.2 396 57.1
EL10Ac8g19056 Beta vulgaris HOM05D002335 ORTHO05D006282 3.4e-98 362.8 389 56.0
FAN26G1551 Fragaria x ananassa HOM05D002335 ORTHO05D006282 4.4e-98 362.5 413 57.1
CANSAT56G2952 Cannabis sativa HOM05D002335 ORTHO05D006282 6.4e-97 358.6 414 55.3
AUR62025250 Chenopodium quinoa HOM05D002335 ORTHO05D006282 6.4e-97 358.6 348 58.6
BraA07t28424Z Brassica rapa HOM05D002335 ORTHO05D006282 4.1e-96 355.9 412 55.3
Medtr2g041690 Medicago truncatula HOM05D002335 ORTHO05D006282 5.4e-96 355.5 409 56.5
Thhalv10014003m.g Eutrema salsugineum HOM05D002335 ORTHO05D006282 1.2e-95 354.4 350 57.1
THA.LOC104799620 Tarenaya hassleriana HOM05D002335 ORTHO05D006282 2.7e-95 353.2 350 59.1
AL3G43580 Arabidopsis lyrata HOM05D002335 ORTHO05D006282 7.8e-95 351.7 407 57.2
Lsat_1_v5_gn_8_86481 Lactuca sativa HOM05D002335 ORTHO05D006282 1.0e-94 351.3 401 51.6
Psat1g134320 Pisum sativum HOM05D002335 ORTHO05D006282 1.3e-94 350.9 285 73.0
Manes.03G040500 Manihot esculenta HOM05D002335 ORTHO05D006282 2.3e-94 350.1 357 60.2
MELO3C015522.2 Cucumis melo HOM05D002335 ORTHO05D006282 5.1e-94 349.0 403 55.8
QL11p000781 Quercus lobata HOM05D002335 ORTHO05D006282 1.5e-93 347.4 287 71.4
CsaV3_1G041060 Cucumis sativus L. HOM05D002335 ORTHO05D006282 3.3e-93 346.3 403 55.6
Sp6g23900 Schrenkiella parvula HOM05D002335 ORTHO05D006282 5.6e-93 345.5 403 52.4
CARHR103630 Cardamine hirsuta HOM05D002335 ORTHO05D006282 1.6e-92 344.0 349 61.0
ATR0598G025 Amborella trichopoda HOM05D002335 ORTHO05D006282 2.1e-92 343.6 354 54.2
C03p11680 Brassica napus HOM05D002335 ORTHO05D006282 2.8e-92 343.2 403 52.1
AL6G32120 Arabidopsis lyrata HOM05D002335 ORTHO05D006282 4.7e-92 342.4 403 52.4
BraA03t10325Z Brassica rapa HOM05D002335 ORTHO05D006282 6.2e-92 342.0 403 51.9
Carub.0006s1891 Capsella rubella HOM05D002335 ORTHO05D006282 1.1e-91 341.3 350 55.7
CARHR192220 Cardamine hirsuta HOM05D002335 ORTHO05D006282 1.8e-91 340.5 349 56.2
HPP92_004364 Vanilla planifolia HOM05D002335 ORTHO05D006282 2.3e-91 340.1 395 54.2
AT5G20580 Arabidopsis thaliana HOM05D002335 ORTHO05D006282 5.2e-91 339.0 403 51.9
MD15G1217700 Malus domestica HOM05D002335 ORTHO05D006282 4.4e-90 335.9 382 57.3
Prupe.7G198700 Prunus persica HOM05D002335 ORTHO05D006282 1.2e-87 327.8 413 53.8
AT2G06005 Arabidopsis thaliana HOM05D002335 ORTHO05D006282 3.5e-87 326.2 343 60.1
TWI63G1279 Tripterygium wilfordii HOM05D002335 ORTHO05D006282 1.7e-86 323.9 404 54.5
Sopen07g021360 Solanum pennellii HOM05D002335 ORTHO05D006282 3.0e-86 323.2 359 57.9
Atru.chr7.1708 Acer truncatum HOM05D002335 ORTHO05D006282 6.6e-86 322.0 342 57.0
Zm00001eb256890 Zea mays HOM05D002335 ORTHO05D006282 1.8e-83 313.9 409 49.1
FAN23G1616 Fragaria x ananassa HOM05D002335 ORTHO05D006282 2.4e-83 313.5 275 66.9
Lj7C687T14 Lonicera japonica HOM05D002335 ORTHO05D006282 2.4e-83 313.5 254 70.9
Aa31LG1G14100 Aethionema arabicum HOM05D002335 ORTHO05D006282 1.5e-82 310.8 470 45.3
Peaxi162Scf00127g01814 Petunia axillaris HOM05D002335 ORTHO05D006282 3.4e-82 309.7 326 58.3
arahy.Tifrunner.gnm1.ann1.UHGN3W Arachis hypogaea HOM05D002335 ORTHO05D006282 5.8e-82 308.9 396 52.3
SHI23809 Sapria himalayana HOM05D002335 ORTHO05D006282 9.9e-82 308.1 253 68.4
Lsat_1_v5_gn_7_35121 Lactuca sativa HOM05D002335 ORTHO05D006692 4.9e-81 305.8 379 53.8
CDE02G0868 Ceratophyllum demersum HOM05D002335 ORTHO05D006282 6.4e-81 305.4 298 58.7
Nitab4.5_0000073g0170 Nicotiana tabacum HOM05D002335 ORTHO05D006282 1.9e-80 303.9 436 47.2
CAN.G1661.12 Capsicum annuum HOM05D002335 ORTHO05D006282 6.0e-79 298.9 406 49.8
Sc18g0002560 Simmondsia chinensis HOM05D002335 ORTHO05D006282 1.2e-74 284.6 270 65.2
DCAR_028335 Daucus carota HOM05D002335 ORTHO05D006282 1.9e-72 277.3 192 81.8
SEGI_06962 Sequoiadendron giganteum HOM05D002335 ORTHO05D006282 2.1e-71 273.9 355 49.3
HPP92_004366 Vanilla planifolia HOM05D002335 ORTHO05D006282 1.5e-69 267.7 395 46.6
Psat3g025000 Pisum sativum HOM05D002335 ORTHO05D006282 8.4e-65 251.9 305 51.5
Nitab4.5_0009436g0040 Nicotiana tabacum HOM05D002335 ORTHO05D006282 7.9e-63 245.4 439 42.6
Cpa.g.sc28.33 Carica papaya HOM05D002335 ORTHO05D006282 3.9e-62 243.0 286 52.8
Mapoly0011s0025 Marchantia polymorpha HOM05D002335 ORTHO05D006282 7.6e-58 228.8 374 40.1
CAN.G404.48 Capsicum annuum HOM05D002335 ORTHO05D006282 2.7e-55 220.3 254 53.5
Pp3c22_13730 Physcomitrium patens HOM05D002335 ORTHO05D006282 2.3e-54 217.2 349 41.3
Lalb_Chr23g0276381 Lupinus albus HOM05D002335 ORTHO05D006282 1.6e-52 211.1 135 84.4
Lalb_Chr07g0181181 Lupinus albus HOM05D002335 ORTHO05D006282 1.9e-48 197.6 161 75.2
Pp3c2_6470 Physcomitrium patens HOM05D002335 ORTHO05D006282 6.7e-46 189.1 359 35.1
Lalb_Chr07g0181191 Lupinus albus HOM05D002335 ORTHO05D006282 1.1e-45 188.3 260 46.5
SMO358G0254 Selaginella moellendorffii HOM05D002335 ORTHO05D006282 2.2e-44 184.1 196 57.1
Actinidia38481 Actinidia chinensis HOM05D002335 ORTHO05D006282 3.8e-41 173.3 128 85.2
Lalb_Chr23g0276371 Lupinus albus HOM05D002335 ORTHO05D006282 5.0e-41 172.9 261 44.4
arahy.Tifrunner.gnm1.ann1.3UYF95 Arachis hypogaea HOM05D002335 ORTHO05D006282 6.5e-41 172.6 276 43.8
Cpa.g.sc28.37 Carica papaya HOM05D002335 ORTHO05D006282 1.0e-33 148.7 110 76.4
Actinidia38482 Actinidia chinensis HOM05D002335 ORTHO05D006282 8.5e-33 145.6 183 50.3
Nitab4.5_0000343g0210 Nicotiana tabacum HOM05D002335 ORTHO05D006282 3.2e-32 143.7 98 80.6
AagrBONN_evm.TU.Sc2ySwM_344.5493 Anthoceros agrestis HOM05D002335 ORTHO05D006282 8.5e-25 119.0 250 33.2
Medtr2g041390 Medicago truncatula HOM05D002335 ORTHO05D006282 1.9e-24 117.9 107 74.8
Nitab4.5_0000343g0220 Nicotiana tabacum HOM05D002335 ORTHO05D006282 2.6e-21 107.5 136 47.1
Ah.14g084930 Amaranthus hybridus HOM05D002335 ORTHO05D006282 3.3e-21 107.1 77 74.0
MD02G1091600 Malus domestica HOM05D002335 ORTHO05D006282 1.7e-20 104.8 180 39.4
Solyc07g041890.1 Solanum lycopersicum HOM05D002335 ORTHO05D006282 2.8e-20 104.0 234 37.6
CBR_g26318 Chara braunii HOM05D002335 ORTHO05D006282 3.7e-20 103.6 244 33.2
Psat6g064600 Pisum sativum HOM05D004726 ORTHO05D005986 5.2e-14 83.2 53 81.1
PGSC0003DMG400019032 Solanum tuberosum HOM05D002335 ORTHO05D006282 6.8e-14 82.8 50 82.0
Cpa.g.c47777 Carica papaya HOM05D002335 ORTHO05D006282 4.8e-12 76.6 52 78.8
Oeu031390.1 Olea europaea HOM05D002335 ORTHO05D006282 7.0e-11 72.8 77 53.2
PSO210G7126 Papaver somniferum HOM05D002335 ORTHO05D006282 7.7e-10 69.3 68 54.4


User provided reference genes

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