Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro06308 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 4.3e-201 704.5 370 100.0
Actinidia29916 Actinidia chinensis HOM05D003970 ORTHO05D004615 4.3e-161 571.6 355 80.6
Dinv36802 Davidia involucrata HOM05D003970 ORTHO05D004615 1.5e-158 563.1 324 83.0
vmacro17169 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 3.5e-155 552.0 343 82.2
Actinidia39693 Actinidia chinensis HOM05D003970 ORTHO05D004615 2.8e-152 542.3 329 78.1
Duzib168G1513 Durio zibethinus HOM05D003970 ORTHO05D004615 3.7e-152 542.0 354 77.7
Lj7A681T64 Lonicera japonica HOM05D003970 ORTHO05D004615 1.1e-151 540.4 354 78.5
CSS0040908 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 2.4e-151 539.3 328 80.2
Gohir.A13G192500 Gossypium hirsutum HOM05D003970 ORTHO05D004615 2.4e-151 539.3 356 78.1
Gohir.D13G197900 Gossypium hirsutum HOM05D003970 ORTHO05D004615 3.1e-151 538.9 356 78.1
Gorai.013G226600 Gossypium raimondii HOM05D003970 ORTHO05D004615 4.0e-151 538.5 356 78.1
TAR623G1298 Trochodendron aralioides HOM05D003970 ORTHO05D004615 5.3e-151 538.1 351 74.4
Rhsim05G0013300 Rhododendron simsii HOM05D003970 ORTHO05D004615 6.9e-151 537.7 343 79.9
Oeu035943.1 Olea europaea HOM05D003970 ORTHO05D004615 1.2e-150 537.0 351 77.5
TWI32G0099 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 1.2e-150 537.0 351 77.2
TAR636G0030 Trochodendron aralioides HOM05D003970 ORTHO05D004615 2.0e-150 536.2 351 74.6
QL02p061312 Quercus lobata HOM05D003970 ORTHO05D004615 4.5e-150 535.0 356 77.8
QL02p061443 Quercus lobata HOM05D003970 ORTHO05D004615 4.5e-150 535.0 356 77.8
Thecc.09G082200 Theobroma cacao HOM05D003970 ORTHO05D004615 7.6e-150 534.3 346 78.0
SGA_v2.0_scaffold23G10060 Striga asiatica HOM05D003970 ORTHO05D004615 1.7e-149 533.1 351 77.5
Eucgr.C03403 Eucalyptus grandis HOM05D003970 ORTHO05D004615 3.8e-149 531.9 356 72.2
Nn6g35566 Nelumbo nucifera HOM05D003970 ORTHO05D004615 4.9e-149 531.6 325 82.2
Actinidia25226 Actinidia chinensis HOM05D003970 ORTHO05D004615 6.5e-149 531.2 314 81.2
FAN28G0363 Fragaria x ananassa HOM05D003970 ORTHO05D004615 1.4e-148 530.0 341 79.5
Prupe.7G204000 Prunus persica HOM05D003970 ORTHO05D004615 1.9e-148 529.6 339 79.6
Cc06_g11850 Coffea canephora HOM05D003970 ORTHO05D004615 2.5e-148 529.3 348 77.3
Migut.L01537 Erythranthe guttata HOM05D003970 ORTHO05D004615 2.5e-148 529.3 354 76.6
Hma1.2p1_0672F.1_g200850 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 5.5e-148 528.1 332 80.4
FAN26G0968 Fragaria x ananassa HOM05D003970 ORTHO05D004615 1.2e-147 526.9 341 79.2
Aqoxy7G03992 Aquilegia oxysepala HOM05D003970 ORTHO05D004615 1.6e-147 526.6 317 79.2
PSO210G0608 Papaver somniferum HOM05D003970 ORTHO05D004615 1.6e-147 526.6 344 78.5
TWI34G1861 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 1.6e-147 526.6 351 76.6
CANSAT56G0340 Cannabis sativa HOM05D003970 ORTHO05D004615 2.1e-147 526.2 352 76.7
CiPaw.04G146900 Carya illinoinensis HOM05D003970 ORTHO05D004615 2.1e-147 526.2 340 78.8
MD15G1212900 Malus domestica HOM05D003970 ORTHO05D004615 2.1e-147 526.2 355 76.9
PSO210G0448 Papaver somniferum HOM05D003970 ORTHO05D004615 2.1e-147 526.2 344 78.2
Potri.018G051100 Populus trichocarpa HOM05D003970 ORTHO05D004615 2.1e-147 526.2 320 79.7
MSTRG.26453 Avicennia marina HOM05D003970 ORTHO05D004615 2.7e-147 525.8 329 80.9
Glyma.13G107500 Glycine max HOM05D003970 ORTHO05D004615 2.7e-147 525.8 325 80.3
MBI05_g23628_MAGBIO Magnolia biondii HOM05D003970 ORTHO05D004615 2.7e-147 525.8 334 80.2
MD02G1085700 Malus domestica HOM05D003970 ORTHO05D004615 2.7e-147 525.8 357 76.8
Lj4A288T21 Lonicera japonica HOM05D003970 ORTHO05D004615 6.0e-147 524.6 361 72.9
VMungo1215G1067 Vigna mungo HOM05D003970 ORTHO05D004615 6.0e-147 524.6 325 78.8
Phvul.003G133400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 1.0e-146 523.9 325 79.7
RcHm_v2.0_Chr2g0094171 Rosa chinensis HOM05D003970 ORTHO05D004615 1.0e-146 523.9 340 78.8
Ciclev10010674m.g Citrus clementina HOM05D003970 ORTHO05D004615 1.3e-146 523.5 357 77.0
Lj4g0010970 Lotus japonicus HOM05D003970 ORTHO05D004615 1.3e-146 523.5 317 78.5
FvH4_1g08120 Fragaria vesca HOM05D003970 ORTHO05D004615 1.8e-146 523.1 341 78.3
FAN19G1405 Fragaria x ananassa HOM05D003970 ORTHO05D004615 1.8e-146 523.1 341 78.3
Glyma.17G051800 Glycine max HOM05D003970 ORTHO05D004615 2.3e-146 522.7 325 79.4
Ciclev10020772m.g Citrus clementina HOM05D003970 ORTHO05D004615 3.0e-146 522.3 336 79.5
FAN23G0579 Fragaria x ananassa HOM05D003970 ORTHO05D004615 3.0e-146 522.3 340 79.1
FAN26G2539 Fragaria x ananassa HOM05D003970 ORTHO05D004615 5.1e-146 521.5 341 78.6
arahy.Tifrunner.gnm1.ann1.B9Q4RC Arachis hypogaea HOM05D003970 ORTHO05D004615 6.7e-146 521.2 300 82.7
DCAR_028283 Daucus carota HOM05D003970 ORTHO05D004615 8.7e-146 520.8 339 78.5
arahy.Tifrunner.gnm1.ann1.7IK41Y Arachis hypogaea HOM05D003970 ORTHO05D004615 1.1e-145 520.4 300 82.3
CsaV3_1G040740 Cucumis sativus L. HOM05D003970 ORTHO05D004615 1.1e-145 520.4 329 78.7
DCAR_024721 Daucus carota HOM05D003970 ORTHO05D004615 1.1e-145 520.4 359 75.2
Cfa003038 Carpinus fangiana HOM05D003970 ORTHO05D004615 1.5e-145 520.0 329 76.3
Manes.16G098400 Manihot esculenta HOM05D003970 ORTHO05D004615 2.5e-145 519.2 325 76.6
Lsat_1_v5_gn_5_142140 Lactuca sativa HOM05D003970 ORTHO05D004615 3.3e-145 518.8 329 76.3
Sc18g0002350 Simmondsia chinensis HOM05D003970 ORTHO05D004615 5.7e-145 518.1 356 71.1
CDE05G2698 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 7.4e-145 517.7 336 75.0
ECA234G3560 Erigeron canadensis HOM05D003970 ORTHO05D004615 2.1e-144 516.2 329 76.0
Peaxi162Scf00724g00210 Petunia axillaris HOM05D003970 ORTHO05D004615 2.1e-144 516.2 330 74.2
SGA_v2.0_scaffold21G09454 Striga asiatica HOM05D003970 ORTHO05D004615 2.8e-144 515.8 369 72.6
HanXRQChr10g0319561 Helianthus annuus HOM05D003970 ORTHO05D004615 3.7e-144 515.4 323 76.8
AUR62029007 Chenopodium quinoa HOM05D003970 ORTHO05D004615 6.2e-144 514.6 299 80.9
Potri.006G145600 Populus trichocarpa HOM05D003970 ORTHO05D004615 8.2e-144 514.2 356 73.0
Gorai.010G085700 Gossypium raimondii HOM05D003970 ORTHO05D004615 1.8e-143 513.1 329 78.1
MELO3C015502.2 Cucumis melo HOM05D003970 ORTHO05D004615 2.4e-143 512.7 300 79.3
Gohir.D06G073400 Gossypium hirsutum HOM05D003970 ORTHO05D004615 3.1e-143 512.3 329 77.8
Atru.chr7.1654 Acer truncatum HOM05D003970 ORTHO05D004615 6.9e-143 511.1 339 75.5
Migut.J00961 Erythranthe guttata HOM05D003970 ORTHO05D004615 6.9e-143 511.1 327 74.6
THA.LOC104808900 Tarenaya hassleriana HOM05D003970 ORTHO05D004615 9.0e-143 510.8 322 79.2
PGR044G0734 Punica granatum HOM05D003970 ORTHO05D004615 1.2e-142 510.4 331 74.0
Gohir.A06G074600 Gossypium hirsutum HOM05D003970 ORTHO05D004615 1.5e-142 510.0 329 77.8
Sp7g06850 Schrenkiella parvula HOM05D003970 ORTHO05D004615 1.5e-142 510.0 326 80.1
Sed0004197 Sechium edule HOM05D003970 ORTHO05D004615 1.5e-142 510.0 309 77.7
Thhalv10003454m.g Eutrema salsugineum HOM05D003970 ORTHO05D004615 2.0e-142 509.6 326 79.4
SalBow1G5979 Salvia bowleyana HOM05D003970 ORTHO05D004615 2.6e-142 509.2 329 76.9
AT5G35460 Arabidopsis thaliana HOM05D003970 ORTHO05D004615 4.5e-142 508.4 356 74.4
AL7G44300 Arabidopsis lyrata HOM05D003970 ORTHO05D004615 7.6e-142 507.7 329 78.4
Carub.0007s3126 Capsella rubella HOM05D003970 ORTHO05D004615 7.6e-142 507.7 326 79.1
AUR62025170 Chenopodium quinoa HOM05D003970 ORTHO05D004615 7.6e-142 507.7 319 77.7
A04p09740 Brassica napus HOM05D003970 ORTHO05D004615 1.7e-141 506.5 326 79.1
BraA04t16636Z Brassica rapa HOM05D003970 ORTHO05D004615 1.7e-141 506.5 326 79.1
Sabra18G0047600 Salix brachista HOM05D003970 ORTHO05D004615 1.7e-141 506.5 338 74.3
Solyc07g041160.3 Solanum lycopersicum HOM05D003970 ORTHO05D004615 2.2e-141 506.1 303 78.9
Sopen07g020420 Solanum pennellii HOM05D003970 ORTHO05D004615 2.9e-141 505.8 303 78.5
Lalb_Chr08g0232451 Lupinus albus HOM05D003970 ORTHO05D004615 6.5e-141 504.6 311 77.2
Nitab4.5_0006849g0020 Nicotiana tabacum HOM05D003970 ORTHO05D004615 6.5e-141 504.6 330 73.9
PGSC0003DMG400020950 Solanum tuberosum HOM05D003970 ORTHO05D004615 6.5e-141 504.6 328 73.8
CAN.G33.23 Capsicum annuum HOM05D003970 ORTHO05D004615 1.1e-140 503.8 324 74.1
Nitab4.5_0001488g0140 Nicotiana tabacum HOM05D003970 ORTHO05D004615 1.1e-140 503.8 330 73.9
CARHR217480 Cardamine hirsuta HOM05D003970 ORTHO05D004615 1.2e-139 500.4 326 78.2
BcaC02g09478 Brassica carinata HOM05D003970 ORTHO05D004615 1.6e-139 500.0 299 79.6
C04p43240 Brassica napus HOM05D003970 ORTHO05D004615 1.6e-139 500.0 299 79.6
BolC4t25903H Brassica oleracea HOM05D003970 ORTHO05D004615 1.6e-139 500.0 299 79.6
Lj6g0022796 Lotus japonicus HOM05D003970 ORTHO05D004615 2.1e-139 499.6 300 78.0
BcaB02g08054 Brassica carinata HOM05D003970 ORTHO05D004615 3.5e-139 498.8 327 78.6
Glyma.15G173000 Glycine max HOM05D003970 ORTHO05D004615 3.5e-139 498.8 309 76.7
Os01g0585100 Oryza sativa ssp. japonica HOM05D003970 ORTHO05D004615 4.6e-139 498.4 335 73.1
ATR0051G045 Amborella trichopoda HOM05D003970 ORTHO05D004615 6.1e-139 498.0 326 75.8
EL10Ac8g19144 Beta vulgaris HOM05D003970 ORTHO05D004615 1.3e-138 496.9 304 77.3
Peaxi162Scf00219g00019 Petunia axillaris HOM05D003970 ORTHO05D004615 1.3e-138 496.9 352 69.3
Psat1g133240 Pisum sativum HOM05D003970 ORTHO05D004615 6.7e-138 494.6 312 75.6
Sabra06G0115100 Salix brachista HOM05D003970 ORTHO05D004615 8.7e-138 494.2 322 75.2
Glyma.09G067100 Glycine max HOM05D003970 ORTHO05D004615 1.1e-137 493.8 309 76.1
VMungo1309G1594 Vigna mungo HOM05D003970 ORTHO05D004615 4.3e-137 491.9 302 76.8
Zm00001eb356980 Zea mays HOM05D003970 ORTHO05D004615 5.7e-137 491.5 298 77.9
Ca_13142_v3 Cicer arietinum L. HOM05D003970 ORTHO05D004615 2.2e-136 489.6 311 74.9
Medtr2g040600 Medicago truncatula HOM05D003970 ORTHO05D004615 2.8e-136 489.2 311 74.9
Phvul.009G229400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 8.2e-136 487.6 302 76.2
Rhsim03G0230700 Rhododendron simsii HOM05D003970 ORTHO05D004615 1.4e-135 486.9 350 76.3
Hund08710 Selenicereus undatus HOM05D003970 ORTHO05D004615 1.2e-134 483.8 325 73.8
Medtr4g125680 Medicago truncatula HOM05D003970 ORTHO05D004615 1.5e-134 483.4 315 72.7
ClCG03G015300 Citrullus lanatus HOM05D003970 ORTHO05D004615 7.7e-134 481.1 419 62.3
TPR.G9462 Trifolium pratense HOM05D003970 ORTHO05D004615 7.7e-134 481.1 299 75.3
Aa31sc339G40 Aethionema arabicum HOM05D003970 ORTHO05D004615 3.2e-132 475.7 306 75.2
ECA236G0065 Erigeron canadensis HOM05D003970 ORTHO05D004615 3.2e-132 475.7 329 70.2
HPP92_005531 Vanilla planifolia HOM05D003970 ORTHO05D004615 3.2e-132 475.7 268 83.6
HanXRQChr04g0126061 Helianthus annuus HOM05D003970 ORTHO05D004615 9.4e-132 474.2 329 70.8
Oeu000306.1 Olea europaea HOM05D003970 ORTHO05D004615 1.6e-131 473.4 324 71.3
arahy.Tifrunner.gnm1.ann1.EC17FL Arachis hypogaea HOM05D003970 ORTHO05D004615 2.7e-131 472.6 312 73.4
TPR.G18106 Trifolium pratense HOM05D003970 ORTHO05D004615 3.9e-130 468.8 299 74.6
TAR624G1217 Trochodendron aralioides HOM05D003970 ORTHO05D004615 5.1e-130 468.4 355 70.7
Gohir.D13G197975 Gossypium hirsutum HOM05D003970 ORTHO05D004615 1.4e-127 460.3 361 70.1
Hma1.2p1_0169F.1_g074770 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 1.8e-127 459.9 328 72.9
Mapoly0061s0008 Marchantia polymorpha HOM05D003970 ORTHO05D004615 4.1e-127 458.8 334 65.0
GSVIVG01015145001 Vitis vinifera HOM05D003970 ORTHO05D004615 1.1e-124 450.7 263 86.7
Lsat_1_v5_gn_8_86281 Lactuca sativa HOM05D003970 ORTHO05D004615 7.2e-124 448.0 364 64.0
Duzib150G0174 Durio zibethinus HOM05D003970 ORTHO05D004615 6.1e-123 444.9 354 67.5
unitig_26.g9177 Utricularia gibba HOM05D003970 ORTHO05D004615 2.3e-122 443.0 298 68.1
BcaNung06959 Brassica carinata HOM05D003970 ORTHO05D004615 6.7e-122 441.4 301 77.4
SMO169G0099 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 8.8e-122 441.0 321 65.4
Zm00001eb160510 Zea mays HOM05D003970 ORTHO05D004615 2.0e-121 439.9 273 76.9
Pp3c2_27340 Physcomitrium patens HOM05D003970 ORTHO05D004615 1.3e-120 437.2 318 64.5
CDE05G3050 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 1.4e-119 433.7 267 78.7
AagrBONN_evm.TU.Sc2ySwM_340.231 Anthoceros agrestis HOM05D003970 ORTHO05D004615 2.4e-119 433.0 313 66.5
Pp3c3_9180 Physcomitrium patens HOM05D003970 ORTHO05D004615 4.1e-119 432.2 298 66.4
BcaB06g26940 Brassica carinata HOM05D003970 ORTHO05D004615 5.9e-118 428.3 299 70.6
CSS0012417 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 1.7e-117 426.8 329 67.8
SMO271G0136 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 2.9e-117 426.0 302 66.9
Haze_25957 Corylus avellana HOM05D003970 ORTHO05D004615 1.1e-113 414.1 369 60.4
Ah.14g085030 Amaranthus hybridus HOM05D003970 ORTHO05D004615 7.7e-110 401.4 302 65.2
arahy.Tifrunner.gnm1.ann1.I25TD2 Arachis hypogaea HOM05D003970 ORTHO05D004615 2.2e-101 373.2 362 55.5
Cpa.g.sc28.103 Carica papaya HOM05D003970 ORTHO05D004615 1.9e-100 370.2 223 78.5
PGSC0003DMG400019544 Solanum tuberosum HOM05D003970 ORTHO05D004615 1.7e-96 357.1 241 72.2
CBR_g16039 Chara braunii HOM05D003970 ORTHO05D004615 2.7e-94 349.7 298 56.4
AagrBONN_evm.TU.Sc2ySwM_340.377 Anthoceros agrestis HOM05D003970 ORTHO05D004615 8.3e-88 328.2 210 71.0
PSO017G0759 Papaver somniferum HOM05D003970 ORTHO05D004615 6.6e-77 292.0 234 65.0
RcHm_v2.0_Chr1g0313941 Rosa chinensis HOM05D003970 ORTHO05D004615 5.8e-65 252.3 150 78.0
Ah.09g231260 Amaranthus hybridus HOM05D003970 ORTHO05D004615 1.1e-58 231.5 314 46.2
SEGI_24858 Sequoiadendron giganteum HOM05D003970 ORTHO05D004615 3.2e-55 219.9 171 61.4
Cc02_g26660 Coffea canephora HOM05D003970 ORTHO05D004615 5.4e-55 219.2 163 74.2
Medtr2g039830 Medicago truncatula HOM05D003970 ORTHO05D004615 2.0e-41 174.1 164 53.7
Zm00001eb362060 Zea mays HOM05D003970 ORTHO05D004615 1.3e-29 134.8 89 74.2
MCO07G676 Micromonas commoda HOM05D003970 ORTHO05D004615 1.1e-26 125.2 335 29.3
Cre03.g207351 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 3.1e-26 123.6 279 30.1
Medtr2g039840 Medicago truncatula HOM05D003970 ORTHO05D004615 3.8e-24 116.7 90 62.2
TPR.G277 Trifolium pratense HOM05D003970 ORTHO05D004615 2.3e-21 107.5 65 76.9
Nitab4.5_0003493g0050 Nicotiana tabacum HOM05D003970 ORTHO05D004615 5.1e-21 106.3 253 34.0
PRCOL_00002316 Prasinoderma coloniale HOM05D003970 ORTHO05D004615 4.3e-20 103.2 298 27.2
Cre14.g620200 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 5.9e-17 92.8 384 25.0
Medtr1g008180 Medicago truncatula HOM05D003970 ORTHO05D004615 1.3e-16 91.7 59 72.9
COL.COLO4_18145 Corchorus olitorius HOM05D003970 ORTHO05D004615 4.2e-15 86.7 77 59.7
Zm00001eb242980 Zea mays HOM05D003970 ORTHO05D004615 5.5e-15 86.3 61 68.9
Zm00001eb304220 Zea mays HOM05D003970 ORTHO05D004615 5.5e-15 86.3 61 68.9
Zm00001eb122080 Zea mays HOM05D003970 ORTHO05D004615 4.6e-14 83.2 61 67.2
Cpa.g.sc28.102 Carica papaya HOM05D003970 ORTHO05D004615 8.2e-11 72.4 60 83.3
Cfa024865 Carpinus fangiana HOM05D003970 ORTHO05D124560 1.4e-10 71.6 108 36.1
COL.COLO4_18144 Corchorus olitorius HOM05D003970 ORTHO05D004615 2.4e-10 70.9 61 80.3
RcHm_v2.0_Chr1g0340041 Rosa chinensis HOM05D003970 ORTHO05D004615 2.6e-09 67.4 33 90.9
QL02p061328 Quercus lobata HOM05D000001 ORTHO05D000003 1.7e-08 64.7 35 82.9
Zm00001eb043210 Zea mays HOM05D008270 ORTHO05D010684 5.5e-07 59.7 41 68.3
Zm00001eb198340 Zea mays HOM05D003970 ORTHO05D004615 9.4e-07 58.9 41 68.3
Zm00001eb372010 Zea mays HOM05D008270 ORTHO05D010684 1.2e-06 58.5 39 69.2


User provided reference genes

Program Settings