Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro06285 Vaccinium macrocarpon HOM05D005692 ORTHO05D006953 3.1e-104 381.7 180 100.0
vmacro23428 Vaccinium macrocarpon HOM05D005692 ORTHO05D006953 3.1e-104 381.7 180 100.0
CiPaw.03G217300 Carya illinoinensis HOM05D005692 ORTHO05D006953 6.7e-51 204.5 116 80.2
COL.COLO4_18212 Corchorus olitorius HOM05D005692 ORTHO05D006953 9.7e-50 200.7 97 89.7
Rhsim03G0233100 Rhododendron simsii HOM05D005692 ORTHO05D006953 1.7e-49 199.9 96 92.7
Thecc.09G090700 Theobroma cacao HOM05D005692 ORTHO05D006953 3.7e-49 198.7 98 88.8
Dinv36757 Davidia involucrata HOM05D005692 ORTHO05D006953 6.3e-49 198.0 98 86.7
Gohir.A02G019200 Gossypium hirsutum HOM05D005692 ORTHO05D006953 3.1e-48 195.7 98 86.7
Gohir.D02G022500 Gossypium hirsutum HOM05D005692 ORTHO05D006953 3.1e-48 195.7 98 86.7
Gorai.005G027900 Gossypium raimondii HOM05D005692 ORTHO05D006953 3.1e-48 195.7 94 89.4
Potri.012G001800 Populus trichocarpa HOM05D005692 ORTHO05D006953 5.9e-47 191.4 92 89.1
Sabra12G0019500 Salix brachista HOM05D005692 ORTHO05D006953 5.9e-47 191.4 92 89.1
Sabra12G0019700 Salix brachista HOM05D005692 ORTHO05D006953 5.9e-47 191.4 92 89.1
Duzib151G0847 Durio zibethinus HOM05D005692 ORTHO05D006953 7.7e-47 191.0 98 83.7
Cfa003097 Carpinus fangiana HOM05D005692 ORTHO05D006953 1.0e-46 190.7 98 84.7
Manes.03G032800 Manihot esculenta HOM05D005692 ORTHO05D006953 1.3e-46 190.3 98 81.6
CSS0005546 Camellia sinensis var. sinensis HOM05D005692 ORTHO05D006953 2.2e-46 189.5 98 83.7
CSS0025569 Camellia sinensis var. sinensis HOM05D005692 ORTHO05D006953 2.2e-46 189.5 98 83.7
Nn8g38892 Nelumbo nucifera HOM05D005692 ORTHO05D006953 2.2e-46 189.5 98 83.7
Sopen12g003750 Solanum pennellii HOM05D005692 ORTHO05D006953 2.2e-46 189.5 97 81.4
Cc06_g11300 Coffea canephora HOM05D005692 ORTHO05D006953 2.9e-46 189.1 94 85.1
Hund14283 Selenicereus undatus HOM05D005692 ORTHO05D006953 3.8e-46 188.7 94 83.0
Nn6g35447 Nelumbo nucifera HOM05D005692 ORTHO05D006953 5.0e-46 188.3 98 83.7
Solyc12g008810.2 Solanum lycopersicum HOM05D005692 ORTHO05D006953 5.0e-46 188.3 97 80.4
PGSC0003DMG400000281 Solanum tuberosum HOM05D005692 ORTHO05D006953 5.0e-46 188.3 97 80.4
Nitab4.5_0000540g0260 Nicotiana tabacum HOM05D005692 ORTHO05D006953 1.5e-45 186.8 97 78.4
Nitab4.5_0009931g0010 Nicotiana tabacum HOM05D005692 ORTHO05D006953 1.5e-45 186.8 97 78.4
AUR62039390 Chenopodium quinoa HOM05D005692 ORTHO05D006953 2.5e-45 186.0 93 83.9
MELO3C015461.2 Cucumis melo HOM05D005692 ORTHO05D006953 2.5e-45 186.0 93 81.7
Glyma.18G151700 Glycine max HOM05D005692 ORTHO05D006953 2.5e-45 186.0 94 83.0
CAN.G1241.20 Capsicum annuum HOM05D005692 ORTHO05D006953 3.2e-45 185.7 97 77.3
Glyma.08G343600 Glycine max HOM05D005692 ORTHO05D006953 4.2e-45 185.3 94 83.0
Ciclev10010392m.g Citrus clementina HOM05D005692 ORTHO05D006953 5.5e-45 184.9 94 84.0
CsaV3_1G040340 Cucumis sativus L. HOM05D005692 ORTHO05D006953 5.5e-45 184.9 93 81.7
Cpa.g.sc20.158 Carica papaya HOM05D005692 ORTHO05D006953 7.2e-45 184.5 95 83.2
HanXRQChr10g0319271 Helianthus annuus HOM05D005692 ORTHO05D006953 9.4e-45 184.1 98 81.6
Ah.09g223860 Amaranthus hybridus HOM05D005692 ORTHO05D006953 1.2e-44 183.7 93 81.7
Oeu039606.1 Olea europaea HOM05D005692 ORTHO05D006953 1.2e-44 183.7 93 80.6
arahy.Tifrunner.gnm1.ann1.JM0M9B Arachis hypogaea HOM05D005692 ORTHO05D006953 1.6e-44 183.3 117 69.2
PGR102G3100 Punica granatum HOM05D005692 ORTHO05D006953 1.6e-44 183.3 98 79.6
Sc14g0000750 Simmondsia chinensis HOM05D005692 ORTHO05D006953 1.6e-44 183.3 93 80.6
arahy.Tifrunner.gnm1.ann1.VY1HWT Arachis hypogaea HOM05D005692 ORTHO05D006953 2.1e-44 183.0 102 77.5
EL10Ac2g04637 Beta vulgaris HOM05D005692 ORTHO05D006953 2.1e-44 183.0 93 81.7
ClCG03G015670 Citrullus lanatus HOM05D005692 ORTHO05D006953 2.1e-44 183.0 93 80.6
ECA234G3968 Erigeron canadensis HOM05D005692 ORTHO05D006953 2.1e-44 183.0 98 81.6
Peaxi162Scf00015g00716 Petunia axillaris HOM05D005692 ORTHO05D006953 2.1e-44 183.0 97 78.4
Phvul.008G136000 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 2.1e-44 183.0 93 83.9
MD02G1077000 Malus domestica HOM05D005692 ORTHO05D006953 3.6e-44 182.2 93 82.8
Phvul.005G056600 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 3.6e-44 182.2 93 82.8
Nitab4.5_0003152g0130 Nicotiana tabacum HOM05D005692 ORTHO05D006953 4.7e-44 181.8 97 77.3
Migut.J00600 Erythranthe guttata HOM05D005692 ORTHO05D006953 6.1e-44 181.4 94 77.7
Migut.J01065 Erythranthe guttata HOM05D005692 ORTHO05D006953 6.1e-44 181.4 94 77.7
Atru.BG.21.p Acer truncatum HOM05D005692 ORTHO05D006953 8.0e-44 181.0 89 86.5
Ah.10g037300 Amaranthus hybridus HOM05D005692 ORTHO05D006953 1.0e-43 180.6 93 80.6
DCAR_011984 Daucus carota HOM05D005692 ORTHO05D006953 1.0e-43 180.6 93 78.5
Duzib187G1084 Durio zibethinus HOM05D005692 ORTHO05D006953 1.0e-43 180.6 98 78.6
Psat6g162800 Pisum sativum HOM05D005692 ORTHO05D006953 1.0e-43 180.6 93 79.6
Prupe.7G211400 Prunus persica HOM05D005692 ORTHO05D006953 1.8e-43 179.9 93 79.6
TWI34G0948 Tripterygium wilfordii HOM05D005692 ORTHO05D006953 1.8e-43 179.9 95 81.1
TAR626G0225 Trochodendron aralioides HOM05D005692 ORTHO05D006953 1.8e-43 179.9 98 79.6
MBI13_g44212_MAGBIO Magnolia biondii HOM05D005692 ORTHO05D006953 2.3e-43 179.5 106 72.6
MBI14_g41836_MAGBIO Magnolia biondii HOM05D005692 ORTHO05D006953 2.3e-43 179.5 101 75.2
Phvul.008G136200 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 2.3e-43 179.5 93 82.8
RcHm_v2.0_Chr2g0093151 Rosa chinensis HOM05D005692 ORTHO05D006953 2.3e-43 179.5 93 80.6
HanXRQChr12g0354791 Helianthus annuus HOM05D005692 ORTHO05D006953 3.0e-43 179.1 98 80.6
FvH4_1g07240 Fragaria vesca HOM05D005692 ORTHO05D006953 4.0e-43 178.7 93 80.6
FAN26G0193 Fragaria x ananassa HOM05D005692 ORTHO05D006953 4.0e-43 178.7 93 80.6
Lj1g0023726 Lotus japonicus HOM05D005692 ORTHO05D006953 4.0e-43 178.7 95 78.9
MD15G1205700 Malus domestica HOM05D005692 ORTHO05D006953 4.0e-43 178.7 93 81.7
Psat6g183720 Pisum sativum HOM05D005692 ORTHO05D006953 4.0e-43 178.7 93 78.5
Lalb_Chr03g0041061 Lupinus albus HOM05D005692 ORTHO05D006953 5.2e-43 178.3 94 77.7
HPP92_009139 Vanilla planifolia HOM05D005692 ORTHO05D006953 5.2e-43 178.3 97 81.4
Ca_07409_v3 Cicer arietinum L. HOM05D005692 ORTHO05D006953 6.7e-43 177.9 93 79.6
Medtr7g051450 Medicago truncatula HOM05D005692 ORTHO05D006953 6.7e-43 177.9 92 79.3
Atru.BG.266.p Acer truncatum HOM05D005692 ORTHO05D006953 8.8e-43 177.6 89 85.4
Lsat_1_v5_gn_5_145440 Lactuca sativa HOM05D005692 ORTHO05D006953 1.5e-42 176.8 98 77.6
Sed0014309 Sechium edule HOM05D005692 ORTHO05D006953 1.5e-42 176.8 92 78.3
Duzib187G0878 Durio zibethinus HOM05D005692 ORTHO05D006953 2.0e-42 176.4 98 79.6
CANSAT78G0210 Cannabis sativa HOM05D005692 ORTHO05D006953 3.3e-42 175.6 99 73.7
Medtr7g021900 Medicago truncatula HOM05D005692 ORTHO05D006953 3.3e-42 175.6 92 78.3
FAN19G2784 Fragaria x ananassa HOM05D005692 ORTHO05D006953 4.4e-42 175.3 93 78.5
Psat6g183640 Pisum sativum HOM05D005692 ORTHO05D006953 5.7e-42 174.9 93 77.4
Actinidia29885 Actinidia chinensis HOM05D003753 ORTHO05D005081 7.5e-42 174.5 93 82.8
Migut.H00760 Erythranthe guttata HOM05D005692 ORTHO05D006953 9.7e-42 174.1 93 75.3
SGA_v2.0_scaffold62G21600 Striga asiatica HOM05D005692 ORTHO05D006953 1.3e-41 173.7 102 75.5
AUR62033506 Chenopodium quinoa HOM05D005692 ORTHO05D006953 2.8e-41 172.6 113 68.1
Migut.H01159 Erythranthe guttata HOM05D005692 ORTHO05D006953 2.8e-41 172.6 94 73.4
FAN23G0510 Fragaria x ananassa HOM05D005692 ORTHO05D006953 2.8e-41 172.6 91 80.2
FAN26G1568 Fragaria x ananassa HOM05D005692 ORTHO05D006953 2.8e-41 172.6 91 80.2
VMungo1383G2743 Vigna mungo HOM05D005692 ORTHO05D006953 2.8e-41 172.6 115 68.7
FAN19G0937 Fragaria x ananassa HOM05D005692 ORTHO05D006953 6.3e-41 171.4 95 77.9
THA.LOC104801884 Tarenaya hassleriana HOM05D005692 ORTHO05D006953 8.2e-41 171.0 95 75.8
Eucgr.C03889 Eucalyptus grandis HOM05D005692 ORTHO05D006953 1.1e-40 170.6 91 76.9
SGA_v2.0_scaffold852G53671 Striga asiatica HOM05D005692 ORTHO05D006953 1.4e-40 170.2 102 74.5
Psat6g183440 Pisum sativum HOM05D005692 ORTHO05D006953 1.8e-40 169.9 93 76.3
FvH4_1g24820 Fragaria vesca HOM05D005692 ORTHO05D006953 3.1e-40 169.1 93 76.3
PSO210G0626 Papaver somniferum HOM05D005692 ORTHO05D006953 1.6e-39 166.8 94 73.4
PSO210G2337 Papaver somniferum HOM05D005692 ORTHO05D006953 1.6e-39 166.8 94 73.4
Peaxi162Scf00354g00223 Petunia axillaris HOM05D005692 ORTHO05D006953 1.6e-39 166.8 97 73.2
TWI32G0831 Tripterygium wilfordii HOM05D005692 ORTHO05D006953 1.6e-39 166.8 95 77.9
SGA_v2.0_scaffold33G13431 Striga asiatica HOM05D005692 ORTHO05D006953 5.9e-39 164.9 106 71.7
Aqoxy4G03142 Aquilegia oxysepala HOM05D005692 ORTHO05D006953 1.0e-38 164.1 98 73.5
GSVIVG01015215001 Vitis vinifera HOM05D005692 ORTHO05D006953 2.9e-38 162.5 98 68.4
Nitab4.5_0003079g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 1.5e-37 160.2 85 76.5
unitig_748.g8121 Utricularia gibba HOM05D005692 ORTHO05D006953 2.5e-37 159.5 93 71.0
SHI00379 Sapria himalayana HOM05D005692 ORTHO05D006953 3.2e-37 159.1 78 84.6
ATR0602G199 Amborella trichopoda HOM05D005692 ORTHO05D006953 9.4e-37 157.5 94 73.4
Os05g0540200 Oryza sativa ssp. japonica HOM05D005692 ORTHO05D006953 2.7e-36 156.0 93 71.0
Nitab4.5_0000095g0140 Nicotiana tabacum HOM05D005692 ORTHO05D006953 3.6e-36 155.6 107 63.6
Aa31LG2G20910 Aethionema arabicum HOM05D005692 ORTHO05D006953 6.8e-35 151.4 91 64.8
CARHR237500 Cardamine hirsuta HOM05D005692 ORTHO05D006953 1.2e-34 150.6 91 67.0
BcaC09g51744 Brassica carinata HOM05D005692 ORTHO05D006953 1.5e-34 150.2 91 67.0
AL7G22650 Arabidopsis lyrata HOM05D005692 ORTHO05D006953 2.0e-34 149.8 89 67.4
AT4G29660 Arabidopsis thaliana HOM05D005692 ORTHO05D006953 2.0e-34 149.8 89 67.4
Carub.0007s1086 Capsella rubella HOM05D005692 ORTHO05D006953 2.0e-34 149.8 89 67.4
Thhalv10026646m.g Eutrema salsugineum HOM05D005692 ORTHO05D006953 2.0e-34 149.8 91 67.0
BcaC09g52211 Brassica carinata HOM05D005692 ORTHO05D006953 5.7e-34 148.3 89 66.3
A01p08470 Brassica napus HOM05D005692 ORTHO05D006953 5.7e-34 148.3 89 66.3
C01p09830 Brassica napus HOM05D005692 ORTHO05D006953 5.7e-34 148.3 89 66.3
BolC1t00945H Brassica oleracea HOM05D005692 ORTHO05D006953 5.7e-34 148.3 89 66.3
BraA01t00794Z Brassica rapa HOM05D005692 ORTHO05D006953 5.7e-34 148.3 89 66.3
Sp7g27450 Schrenkiella parvula HOM05D005692 ORTHO05D006953 9.8e-34 147.5 89 67.4
Sp3g29900 Schrenkiella parvula HOM05D005692 ORTHO05D006953 1.3e-33 147.1 89 68.5
Nitab4.5_0008958g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 1.2e-31 140.6 78 76.9
Nitab4.5_0004795g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 3.5e-31 139.0 80 75.0
Aqoxy1G00378 Aquilegia oxysepala HOM05D005692 ORTHO05D006953 2.9e-30 136.0 93 63.4
CDE06G0459 Ceratophyllum demersum HOM05D005692 ORTHO05D006953 2.5e-29 132.9 74 74.3
Peaxi162Scf00498g00124 Petunia axillaris HOM05D005692 ORTHO05D006953 3.2e-29 132.5 73 75.3
SHI21206 Sapria himalayana HOM05D005692 ORTHO05D006953 8.0e-28 127.9 65 80.0
CDE06G1459 Ceratophyllum demersum HOM05D005692 ORTHO05D006953 3.4e-26 122.5 74 75.7
TPR.G24304 Trifolium pratense HOM05D005692 ORTHO05D006953 1.3e-25 120.6 209 33.5
Psat0s10921g0080 Pisum sativum HOM05D005692 ORTHO05D006953 7.0e-24 114.8 61 83.6
SGA_v2.0_scaffold33G13433 Striga asiatica HOM05D000524 ORTHO05D000381 9.2e-24 114.4 61 83.6
FAN19G3189 Fragaria x ananassa HOM05D005692 ORTHO05D006953 1.7e-22 110.2 74 66.2
Mapoly0063s0096 Marchantia polymorpha HOM05D005692 ORTHO05D006953 1.8e-16 90.1 75 52.0
CBR_g36562 Chara braunii HOM05D005692 ORTHO05D006953 4.6e-15 85.5 78 47.4
Zm00001eb294300 Zea mays HOM05D005692 ORTHO05D006953 7.3e-13 78.2 61 59.0
Haze_25902 Corylus avellana HOM05D001256 ORTHO05D001141 1.6e-12 77.0 43 74.4
Pp3c13_20310 Physcomitrium patens HOM05D005692 ORTHO05D006953 1.4e-08 63.9 57 47.4


User provided reference genes

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