Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro06269 Vaccinium macrocarpon HOM05D006529 ORTHO05D008380 4.2e-118 427.9 204 100.0
Actinidia29893 Actinidia chinensis HOM05D006529 ORTHO05D008380 6.8e-84 314.3 217 75.1
Dinv42286 Davidia involucrata HOM05D006529 ORTHO05D008380 7.1e-81 304.3 210 70.0
CSS0016193 Camellia sinensis var. sinensis HOM05D006529 ORTHO05D008380 4.6e-80 301.6 202 74.3
DCAR_012008 Daucus carota HOM05D006529 ORTHO05D008380 3.9e-79 298.5 210 68.6
Lj7C671T1 Lonicera japonica HOM05D006529 ORTHO05D008380 3.3e-78 295.4 214 68.2
Nitab4.5_0004011g0030 Nicotiana tabacum HOM05D006529 ORTHO05D008380 8.1e-77 290.8 205 69.3
TAR624G0297 Trochodendron aralioides HOM05D006529 ORTHO05D008380 1.1e-76 290.4 204 71.1
Atru.chr7.1518 Acer truncatum HOM05D006529 ORTHO05D008380 1.8e-76 289.7 204 67.2
Cfa003138 Carpinus fangiana HOM05D006529 ORTHO05D008380 4.0e-76 288.5 199 67.8
Cc06_g10920 Coffea canephora HOM05D006529 ORTHO05D008380 4.0e-76 288.5 201 69.7
Dinv36729 Davidia involucrata HOM05D006529 ORTHO05D008380 4.0e-76 288.5 206 69.4
Eucgr.C00932 Eucalyptus grandis HOM05D006529 ORTHO05D008380 2.9e-74 282.3 210 64.8
CAN.G142.8 Capsicum annuum HOM05D006529 ORTHO05D008380 2.4e-73 279.3 199 66.8
CiPaw.04G153200 Carya illinoinensis HOM05D006529 ORTHO05D008380 3.2e-73 278.9 199 66.8
ECA240G3812 Erigeron canadensis HOM05D006529 ORTHO05D008380 4.2e-73 278.5 206 65.5
Gohir.A05G027800 Gossypium hirsutum HOM05D006529 ORTHO05D008380 9.3e-73 277.3 201 66.2
Gohir.D05G029600 Gossypium hirsutum HOM05D006529 ORTHO05D008380 1.2e-72 276.9 201 65.7
Gorai.009G029800 Gossypium raimondii HOM05D006529 ORTHO05D008380 1.2e-72 276.9 201 65.7
RcHm_v2.0_Chr2g0092481 Rosa chinensis HOM05D006529 ORTHO05D008380 2.7e-72 275.8 199 66.8
Duzib150G0994 Durio zibethinus HOM05D006529 ORTHO05D008380 3.5e-72 275.4 201 65.7
Thecc.09G094900 Theobroma cacao HOM05D006529 ORTHO05D008380 3.0e-71 272.3 208 64.9
Hund07265 Selenicereus undatus HOM05D006529 ORTHO05D008380 3.9e-71 271.9 202 65.8
Prupe.7G215100 Prunus persica HOM05D006529 ORTHO05D008380 1.5e-70 270.0 206 66.0
HanXRQChr09g0238511 Helianthus annuus HOM05D006529 ORTHO05D008380 2.5e-70 269.2 199 64.8
Ciclev10009577m.g Citrus clementina HOM05D006529 ORTHO05D008380 3.3e-70 268.9 204 64.2
FAN23G2505 Fragaria x ananassa HOM05D006529 ORTHO05D008380 5.6e-70 268.1 201 64.7
FvH4_1g06740 Fragaria vesca HOM05D006529 ORTHO05D008380 9.6e-70 267.3 201 64.7
FAN19G1593 Fragaria x ananassa HOM05D006529 ORTHO05D008380 9.6e-70 267.3 201 64.7
MD02G1072300 Malus domestica HOM05D006529 ORTHO05D008380 9.6e-70 267.3 206 66.0
PGR142G1231 Punica granatum HOM05D006529 ORTHO05D008380 1.6e-69 266.5 206 64.1
COL.COLO4_18251 Corchorus olitorius HOM05D006529 ORTHO05D008380 2.8e-69 265.8 214 62.1
GSVIVG01015253001 Vitis vinifera HOM05D006529 ORTHO05D008380 2.8e-69 265.8 201 64.7
Migut.K00572 Erythranthe guttata HOM05D006529 ORTHO05D008380 3.6e-69 265.4 200 67.0
Nn8g38953 Nelumbo nucifera HOM05D006529 ORTHO05D008380 3.6e-69 265.4 210 62.4
QL02p063543 Quercus lobata HOM05D006529 ORTHO05D008380 4.8e-69 265.0 239 55.6
CSS0046887 Camellia sinensis var. sinensis HOM05D006529 ORTHO05D008380 6.2e-69 264.6 203 67.5
AUR62006831 Chenopodium quinoa HOM05D006529 ORTHO05D008380 1.1e-68 263.8 204 62.3
AUR62000487 Chenopodium quinoa HOM05D006529 ORTHO05D008380 1.4e-68 263.5 204 61.8
Thhalv10026289m.g Eutrema salsugineum HOM05D006529 ORTHO05D008380 1.4e-68 263.5 201 62.2
Oeu052123.2 Olea europaea HOM05D006529 ORTHO05D008380 1.4e-68 263.5 223 60.1
Sp7g24240 Schrenkiella parvula HOM05D006529 ORTHO05D008380 1.8e-68 263.1 203 61.6
Nn6g35394 Nelumbo nucifera HOM05D006529 ORTHO05D008380 4.0e-68 261.9 206 62.6
Manes.16G105400 Manihot esculenta HOM05D006529 ORTHO05D008380 6.9e-68 261.2 202 63.4
Ca_17386_v3 Cicer arietinum L. HOM05D006529 ORTHO05D008380 9.0e-68 260.8 202 64.9
AT4G26240 Arabidopsis thaliana HOM05D006529 ORTHO05D008380 1.2e-67 260.4 201 61.2
MSTRG.10586 Avicennia marina HOM05D006529 ORTHO05D008380 1.2e-67 260.4 199 64.3
A03p56550 Brassica napus HOM05D006529 ORTHO05D008380 1.2e-67 260.4 203 61.1
Potri.006G153800 Populus trichocarpa HOM05D006529 ORTHO05D008380 1.5e-67 260.0 203 62.6
FAN14G0658 Fragaria x ananassa HOM05D006529 ORTHO05D008380 2.0e-67 259.6 185 65.9
MD15G1202100 Malus domestica HOM05D006529 ORTHO05D008380 2.6e-67 259.2 206 64.1
AL7G26720 Arabidopsis lyrata HOM05D006529 ORTHO05D008380 3.4e-67 258.8 201 61.7
Carub.0007s1471 Capsella rubella HOM05D006529 ORTHO05D008380 3.4e-67 258.8 201 61.2
CARHR233790 Cardamine hirsuta HOM05D006529 ORTHO05D008380 7.6e-67 257.7 201 60.2
Haze_25864 Corylus avellana HOM05D006529 ORTHO05D008380 1.7e-66 256.5 199 63.3
TWI63G1011 Tripterygium wilfordii HOM05D006529 ORTHO05D008380 1.7e-66 256.5 205 61.5
Ah.06g190810 Amaranthus hybridus HOM05D006529 ORTHO05D008380 2.9e-66 255.8 202 62.4
Lalb_Chr05g0223501 Lupinus albus HOM05D006529 ORTHO05D008380 1.1e-65 253.8 203 62.6
PSO832G0687 Papaver somniferum HOM05D006529 ORTHO05D008380 1.9e-65 253.1 201 61.7
CANSAT56G2962 Cannabis sativa HOM05D006529 ORTHO05D008380 9.3e-65 250.8 179 66.5
C07p54750 Brassica napus HOM05D006529 ORTHO05D008380 2.7e-64 249.2 203 59.1
BolC7t45964H Brassica oleracea HOM05D006529 ORTHO05D008380 2.7e-64 249.2 203 59.1
Medtr8g101990 Medicago truncatula HOM05D006529 ORTHO05D008380 2.7e-64 249.2 202 59.4
arahy.Tifrunner.gnm1.ann1.YG2MQU Arachis hypogaea HOM05D006529 ORTHO05D008380 1.0e-63 247.3 203 60.1
BcaC06g32765 Brassica carinata HOM05D006529 ORTHO05D008380 1.3e-63 246.9 205 58.0
ClCG03G015880 Citrullus lanatus HOM05D006529 ORTHO05D008380 2.3e-63 246.1 207 60.4
SGA_v2.0_scaffold210G42089 Striga asiatica HOM05D006529 ORTHO05D008380 2.3e-63 246.1 191 63.9
VMungo0251G0255 Vigna mungo HOM05D006529 ORTHO05D008380 2.3e-63 246.1 202 61.4
BraA03t14725Z Brassica rapa HOM05D006529 ORTHO05D008380 3.0e-63 245.7 204 58.3
Aqoxy7G01329 Aquilegia oxysepala HOM05D006529 ORTHO05D008380 5.1e-63 245.0 201 60.7
arahy.Tifrunner.gnm1.ann1.HB8I5Y Arachis hypogaea HOM05D006529 ORTHO05D008380 6.6e-63 244.6 203 59.6
PSO063G6648 Papaver somniferum HOM05D006529 ORTHO05D008380 6.6e-63 244.6 201 60.2
THA.LOC104813489 Tarenaya hassleriana HOM05D006529 ORTHO05D008380 6.6e-63 244.6 201 61.2
CDE05G3131 Ceratophyllum demersum HOM05D006529 ORTHO05D008380 8.7e-63 244.2 201 56.7
Lj4g0018594 Lotus japonicus HOM05D006529 ORTHO05D008380 1.5e-62 243.4 202 60.4
Glyma.05G223900 Glycine max HOM05D006529 ORTHO05D008380 5.6e-62 241.5 202 60.9
Glyma.08G031000 Glycine max HOM05D006529 ORTHO05D008380 5.6e-62 241.5 202 60.9
Psat7g019320 Pisum sativum HOM05D006529 ORTHO05D008380 2.1e-61 239.6 202 60.4
SalBow1G6632 Salvia bowleyana HOM05D006529 ORTHO05D008380 2.1e-61 239.6 230 54.8
Phvul.002G305700 Phaseolus vulgaris HOM05D006529 ORTHO05D008380 6.9e-60 234.6 202 58.4
Aqoxy199s004 Aquilegia oxysepala HOM05D006529 ORTHO05D008380 1.2e-59 233.8 196 59.2
Sed0011062 Sechium edule HOM05D006529 ORTHO05D008380 3.4e-59 232.3 200 58.5
MELO3C015437.2 Cucumis melo HOM05D006529 ORTHO05D008380 4.3e-54 215.3 207 54.6
Peaxi162Scf00883g01013 Petunia axillaris HOM05D006529 ORTHO05D008380 1.3e-53 213.8 205 56.1
FAN26G1500 Fragaria x ananassa HOM05D006529 ORTHO05D008380 7.1e-49 198.0 208 56.7
CsaV3_UNG050340 Cucumis sativus L. HOM05D006529 ORTHO05D008380 9.3e-49 197.6 141 63.1
Lsat_1_v5_gn_7_38121 Lactuca sativa HOM05D006529 ORTHO05D008380 2.3e-47 193.0 152 61.8
TPR.G17281 Trifolium pratense HOM05D006529 ORTHO05D008380 2.5e-46 189.5 145 59.3
Zm00001eb356780 Zea mays HOM05D006529 ORTHO05D008380 7.4e-46 188.0 169 53.3
Os01g0559300 Oryza sativa ssp. japonica HOM05D006529 ORTHO05D008380 9.0e-44 181.0 174 51.1
CANSAT56G3512 Cannabis sativa HOM05D006529 ORTHO05D008380 1.0e-42 177.6 166 54.8
Cpa.g.sc78.59 Carica papaya HOM05D006529 ORTHO05D008380 1.2e-40 170.6 189 48.7
Sc18g0001790 Simmondsia chinensis HOM05D006529 ORTHO05D008380 1.3e-39 167.2 155 56.8
Aa31LG3G600 Aethionema arabicum HOM05D006529 ORTHO05D008380 2.0e-35 153.3 168 49.4
SalBow1G6389 Salvia bowleyana HOM05D006529 ORTHO05D008380 1.7e-34 150.2 139 54.0
CsaV3_1G040070 Cucumis sativus L. HOM05D006529 ORTHO05D008380 1.1e-33 147.5 172 50.0
FAN26G3434 Fragaria x ananassa HOM05D006529 ORTHO05D008380 6.1e-32 141.7 125 56.0
HanXRQChr03g0061021 Helianthus annuus HOM05D006529 ORTHO05D008380 1.8e-31 140.2 110 60.0
SMO164G0011 Selaginella moellendorffii HOM05D006529 ORTHO05D008380 1.9e-25 120.2 169 38.5
SHI02792 Sapria himalayana HOM05D006529 ORTHO05D008380 1.6e-24 117.1 117 49.6
Lalb_Chr09g0331701 Lupinus albus HOM05D006529 ORTHO05D008380 2.1e-24 116.7 69 72.5
Nitab4.5_0009098g0020 Nicotiana tabacum HOM05D006529 ORTHO05D008380 3.6e-24 115.9 86 68.6
Sabra06G0122000 Salix brachista HOM05D006529 ORTHO05D008380 6.7e-23 111.7 100 58.0
CBR_g10883 Chara braunii HOM05D006529 ORTHO05D008380 7.0e-20 101.7 177 35.6
HPP92_005506 Vanilla planifolia HOM05D006529 ORTHO05D008380 1.2e-19 100.9 168 38.1
Sabra06G0121800 Salix brachista HOM05D006529 ORTHO05D008380 4.5e-19 99.0 56 76.8
HanXRQChr03g0061031 Helianthus annuus HOM05D006529 ORTHO05D008380 5.5e-17 92.0 86 57.0
FAN27G1398 Fragaria x ananassa HOM05D006529 ORTHO05D008380 7.2e-17 91.7 71 62.0
SHI02791 Sapria himalayana HOM05D006529 ORTHO05D008380 3.1e-12 76.3 53 56.6
PGSC0003DMG400015618 Solanum tuberosum HOM05D006529 ORTHO05D008380 2.7e-11 73.2 58 67.2
Sopen08g011810 Solanum pennellii HOM05D006529 ORTHO05D008380 1.3e-10 70.9 72 50.0
Solyc08g041690.1 Solanum lycopersicum HOM05D006529 ORTHO05D008380 1.2e-08 64.3 36 72.2
RcHm_v2.0_Chr7g0226351 Rosa chinensis HOM05D006529 ORTHO05D008380 4.7e-08 62.4 58 53.4
FAN02G1845 Fragaria x ananassa HOM05D000599 ORTHO05D000554 1.8e-07 60.5 90 43.3
Lalb_Chr09g0331711 Lupinus albus HOM05D006529 ORTHO05D008380 5.2e-07 58.9 45 62.2
Actinidia07461 Actinidia chinensis HOM05D006529 ORTHO05D008380 8.8e-07 58.2 35 82.9


User provided reference genes

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