Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro06236 Vaccinium macrocarpon HOM05D007452 ORTHO05D009375 6.5e-67 257.3 133 100.0
Rhsim03G0239200 Rhododendron simsii HOM05D007452 ORTHO05D009375 1.1e-50 203.4 118 88.1
Cc06_g10100 Coffea canephora HOM05D007452 ORTHO05D009375 2.7e-49 198.7 133 72.9
PGSC0003DMG400023982 Solanum tuberosum HOM05D007452 ORTHO05D009375 3.6e-49 198.4 133 76.7
Nitab4.5_0002165g0070 Nicotiana tabacum HOM05D007452 ORTHO05D009375 1.4e-48 196.4 133 75.2
Nitab4.5_0003331g0020 Nicotiana tabacum HOM05D007452 ORTHO05D009375 2.3e-48 195.7 132 75.0
Solyc11g006870.1 Solanum lycopersicum HOM05D007452 ORTHO05D009375 2.6e-47 192.2 133 73.7
Sopen11g002770 Solanum pennellii HOM05D007452 ORTHO05D009375 2.6e-47 192.2 133 73.7
Nitab4.5_0000066g0140 Nicotiana tabacum HOM05D007452 ORTHO05D009375 5.7e-47 191.0 133 72.2
CAN.G645.18 Capsicum annuum HOM05D007452 ORTHO05D009375 3.7e-46 188.3 134 70.9
Prupe.7G224900 Prunus persica HOM05D007452 ORTHO05D009375 8.2e-46 187.2 137 69.3
TWI34G0936 Tripterygium wilfordii HOM05D007452 ORTHO05D009375 1.1e-45 186.8 136 69.9
MD02G1057900 Malus domestica HOM05D007452 ORTHO05D009375 2.4e-45 185.7 137 68.6
MD15G1192300 Malus domestica HOM05D007452 ORTHO05D009375 2.4e-45 185.7 134 69.4
FvH4_1g05720 Fragaria vesca HOM05D007452 ORTHO05D009375 4.1e-45 184.9 133 70.7
FAN28G0080 Fragaria x ananassa HOM05D007452 ORTHO05D009375 5.3e-45 184.5 133 70.7
PGR102G0901 Punica granatum HOM05D007452 ORTHO05D009375 7.0e-45 184.1 133 70.7
SGA_v2.0_scaffold10G05148 Striga asiatica HOM05D007452 ORTHO05D009375 7.0e-45 184.1 130 75.4
PSO210G5570 Papaver somniferum HOM05D007452 ORTHO05D009375 1.2e-44 183.3 134 70.9
MSTRG.19570 Avicennia marina HOM05D007452 ORTHO05D009375 1.5e-44 183.0 130 72.3
FAN26G0145 Fragaria x ananassa HOM05D007452 ORTHO05D009375 1.5e-44 183.0 133 69.9
FAN19G0597 Fragaria x ananassa HOM05D007452 ORTHO05D009375 2.0e-44 182.6 133 69.9
FAN26G2311 Fragaria x ananassa HOM05D007452 ORTHO05D009375 2.0e-44 182.6 133 69.2
GSVIVG01015344001 Vitis vinifera HOM05D007452 ORTHO05D009375 2.0e-44 182.6 137 70.8
COL.COLO4_34802 Corchorus olitorius HOM05D007452 ORTHO05D009375 3.5e-44 181.8 135 68.9
RcHm_v2.0_Chr2g0091331 Rosa chinensis HOM05D007452 ORTHO05D009375 3.5e-44 181.8 131 71.8
Thecc.09G105200 Theobroma cacao HOM05D007452 ORTHO05D009375 3.5e-44 181.8 135 69.6
Oeu002255.1 Olea europaea HOM05D007452 ORTHO05D009375 4.5e-44 181.4 135 71.1
Atru.chr7.1416 Acer truncatum HOM05D007452 ORTHO05D009375 1.0e-43 180.3 142 65.5
QL02p043240 Quercus lobata HOM05D007452 ORTHO05D009375 1.0e-43 180.3 129 70.5
QL02p044487 Quercus lobata HOM05D007452 ORTHO05D009375 1.0e-43 180.3 129 70.5
AT5G19570 Arabidopsis thaliana HOM05D007452 ORTHO05D009375 1.3e-43 179.9 138 65.2
Haze_25788 Corylus avellana HOM05D007452 ORTHO05D009375 1.7e-43 179.5 137 67.2
HanXRQChr10g0318511 Helianthus annuus HOM05D007452 ORTHO05D009375 1.7e-43 179.5 130 72.3
CARHR193330 Cardamine hirsuta HOM05D007452 ORTHO05D009375 3.8e-43 178.3 137 65.7
Migut.J01126 Erythranthe guttata HOM05D007452 ORTHO05D009375 5.0e-43 177.9 130 72.3
TAR636G3481 Trochodendron aralioides HOM05D007452 ORTHO05D009375 5.0e-43 177.9 134 70.1
Lsat_1_v5_gn_5_147400 Lactuca sativa HOM05D007452 ORTHO05D009375 8.5e-43 177.2 132 72.0
unitig_899.g15033 Utricularia gibba HOM05D007452 ORTHO05D009375 8.5e-43 177.2 130 69.2
Sed0023851 Sechium edule HOM05D007452 ORTHO05D009375 1.4e-42 176.4 131 68.7
AUR62021449 Chenopodium quinoa HOM05D007452 ORTHO05D009375 2.5e-42 175.6 132 67.4
Dinv41642 Davidia involucrata HOM05D007452 ORTHO05D009375 2.5e-42 175.6 125 72.8
Ciclev10009852m.g Citrus clementina HOM05D007452 ORTHO05D009375 3.2e-42 175.3 135 68.1
Gohir.D06G063500 Gossypium hirsutum HOM05D007452 ORTHO05D009375 3.2e-42 175.3 135 67.4
MELO3C024705.2 Cucumis melo HOM05D007452 ORTHO05D009375 5.5e-42 174.5 131 69.5
SalBow6G2888 Salvia bowleyana HOM05D007452 ORTHO05D009375 9.4e-42 173.7 130 70.0
AL6G31080 Arabidopsis lyrata HOM05D007452 ORTHO05D009375 1.6e-41 172.9 139 64.0
Ah.09g230860 Amaranthus hybridus HOM05D007452 ORTHO05D009375 3.6e-41 171.8 135 65.9
Thhalv10014912m.g Eutrema salsugineum HOM05D007452 ORTHO05D009375 3.6e-41 171.8 137 65.0
DCAR_012055 Daucus carota HOM05D007452 ORTHO05D009375 8.0e-41 170.6 133 67.7
A02p05660 Brassica napus HOM05D007452 ORTHO05D009375 1.8e-40 169.5 141 63.1
BraA02t05518Z Brassica rapa HOM05D007452 ORTHO05D009375 3.9e-40 168.3 140 62.9
BcaC03g13689 Brassica carinata HOM05D007452 ORTHO05D009375 5.2e-40 167.9 136 64.0
BNapus_Darmor_BZH_scaffold_38p02290 Brassica napus HOM05D007452 ORTHO05D009375 5.2e-40 167.9 136 64.0
Nn2g11650 Nelumbo nucifera HOM05D007452 ORTHO05D009375 5.2e-40 167.9 135 65.9
Potri.018G084400 Populus trichocarpa HOM05D007452 ORTHO05D009375 6.7e-40 167.5 136 66.2
Sabra18G0072700 Salix brachista HOM05D007452 ORTHO05D009375 1.1e-39 166.8 133 67.7
Eucgr.C01281 Eucalyptus grandis HOM05D007452 ORTHO05D009375 1.5e-39 166.4 124 69.4
THA.LOC104799068 Tarenaya hassleriana HOM05D007452 ORTHO05D009375 2.0e-39 166.0 135 64.4
THA.LOC104808980 Tarenaya hassleriana HOM05D007452 ORTHO05D009375 2.0e-39 166.0 135 64.4
BcaB05g23392 Brassica carinata HOM05D007452 ORTHO05D009375 3.3e-39 165.2 140 62.1
CiPaw.04G161200 Carya illinoinensis HOM05D007452 ORTHO05D009375 5.7e-39 164.5 130 66.2
HPP92_008140 Vanilla planifolia HOM05D007452 ORTHO05D009375 7.4e-39 164.1 131 61.8
Ca_17318_v3 Cicer arietinum L. HOM05D007452 ORTHO05D009375 9.7e-39 163.7 132 64.4
ClCG06G008870 Citrullus lanatus HOM05D007452 ORTHO05D009375 1.3e-38 163.3 114 72.8
Glyma.08G035800 Glycine max HOM05D007452 ORTHO05D009375 1.3e-38 163.3 129 66.7
Gorai.010G074100 Gossypium raimondii HOM05D007452 ORTHO05D009375 1.3e-38 163.3 123 67.5
Aqoxy7G01521 Aquilegia oxysepala HOM05D007452 ORTHO05D009375 1.7e-38 162.9 126 68.3
Duzib187G0798 Durio zibethinus HOM05D007452 ORTHO05D009375 2.2e-38 162.5 121 68.6
Gohir.A06G065000 Gossypium hirsutum HOM05D007452 ORTHO05D009375 2.8e-38 162.2 123 67.5
Phvul.002G311100 Phaseolus vulgaris HOM05D007452 ORTHO05D009375 2.8e-38 162.2 129 65.9
Carub.0006s1792 Capsella rubella HOM05D007452 ORTHO05D009375 1.1e-37 160.2 139 59.7
Cfa003221 Carpinus fangiana HOM05D007452 ORTHO05D009375 1.4e-37 159.8 123 66.7
Medtr8g102920 Medicago truncatula HOM05D007452 ORTHO05D009375 1.8e-37 159.5 130 60.8
Psat7g014560 Pisum sativum HOM05D007452 ORTHO05D009375 2.4e-37 159.1 132 61.4
Manes.03G024500 Manihot esculenta HOM05D007452 ORTHO05D009375 4.1e-37 158.3 121 67.8
Peaxi162Scf00539g00066 Petunia axillaris HOM05D007452 ORTHO05D009375 5.3e-37 157.9 113 65.5
Sopen08g027980 Solanum pennellii HOM05D007452 ORTHO05D009375 2.0e-36 156.0 127 64.6
Aa31LG5G13720 Aethionema arabicum HOM05D007452 ORTHO05D009375 4.5e-36 154.8 116 65.5
BolC2t06971H Brassica oleracea HOM05D007452 ORTHO05D009375 1.0e-35 153.7 130 63.1
Sc08g0007740 Simmondsia chinensis HOM05D007452 ORTHO05D009375 1.0e-35 153.7 136 61.8
ATR0315G055 Amborella trichopoda HOM05D007452 ORTHO05D009375 3.8e-35 151.8 127 64.6
CSS0004194 Camellia sinensis var. sinensis HOM05D007452 ORTHO05D009375 6.5e-35 151.0 120 66.7
Lalb_Chr05g0223071 Lupinus albus HOM05D007452 ORTHO05D009375 6.5e-35 151.0 122 62.3
Os05g0188300 Oryza sativa ssp. japonica HOM05D007452 ORTHO05D009375 2.5e-34 149.1 128 62.5
Glyma.05G228800 Glycine max HOM05D007452 ORTHO05D009375 9.4e-34 147.1 116 65.5
HanXRQChr03g0087651 Helianthus annuus HOM05D007452 ORTHO05D009375 1.4e-32 143.3 116 67.2
Zm00001eb089090 Zea mays HOM05D007452 ORTHO05D009375 1.8e-32 142.9 128 60.2
CDE02G1573 Ceratophyllum demersum HOM05D007452 ORTHO05D009375 1.2e-31 140.2 130 57.7
MBI04_g14927_MAGBIO Magnolia biondii HOM05D007452 ORTHO05D009375 2.6e-31 139.0 113 62.8
CiPaw.08G085300 Carya illinoinensis HOM05D007452 ORTHO05D009375 2.2e-30 136.0 124 59.7
EL10Ac8g18425 Beta vulgaris HOM05D007452 ORTHO05D009375 3.7e-30 135.2 106 65.1
CsaV3_1G020810 Cucumis sativus L. HOM05D007452 ORTHO05D009375 1.8e-29 132.9 99 67.7
HanXRQChr02g0047631 Helianthus annuus HOM05D007452 ORTHO05D009375 1.3e-27 126.7 112 64.3
SEGI_20837 Sequoiadendron giganteum HOM05D007452 ORTHO05D009375 1.6e-25 119.8 133 51.9
Cfa001992 Carpinus fangiana HOM05D007452 ORTHO05D009375 2.7e-25 119.0 95 64.2
SMO119G0523 Selaginella moellendorffii HOM05D007452 ORTHO05D009375 1.1e-21 107.1 124 46.8
Pp3c5_13600 Physcomitrium patens HOM05D007452 ORTHO05D009375 2.7e-20 102.4 129 47.3
Mapoly0005s0019 Marchantia polymorpha HOM05D007452 ORTHO05D009375 2.1e-17 92.8 130 41.5
AagrBONN_evm.TU.Sc2ySwM_117.3226 Anthoceros agrestis HOM05D007452 ORTHO05D009375 9.8e-15 84.0 127 40.9
MBI12_g37480_MAGBIO Magnolia biondii HOM05D007452 ORTHO05D009375 3.6e-09 65.5 51 66.7
MBI05_g24448_MAGBIO Magnolia biondii HOM05D007452 ORTHO05D009375 9.8e-07 57.4 70 52.9


User provided reference genes

Program Settings