Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro06229 Vaccinium macrocarpon HOM05D005514 ORTHO05D006563 0.0e+00 1419.8 693 100.0
Rhsim03G0240000 Rhododendron simsii HOM05D005514 ORTHO05D006563 9.0e-120 435.3 665 46.9
Actinidia32673 Actinidia chinensis HOM05D005514 ORTHO05D006563 6.7e-115 419.1 307 72.3
CSS0000167 Camellia sinensis var. sinensis HOM05D005514 ORTHO05D006563 1.8e-107 394.4 325 67.4
Actinidia07405 Actinidia chinensis HOM05D005514 ORTHO05D006563 1.3e-105 388.3 313 68.1
Gohir.D08G262600 Gossypium hirsutum HOM05D005514 ORTHO05D006563 1.2e-103 381.7 320 66.2
Duzib168G0165 Durio zibethinus HOM05D005514 ORTHO05D006563 4.5e-103 379.8 317 65.9
Hma1.2p1_1151F.1_g261950 Hydrangea macrophylla HOM05D005514 ORTHO05D006563 7.7e-103 379.0 318 66.4
Dinv41624 Davidia involucrata HOM05D005514 ORTHO05D006563 1.3e-102 378.3 318 65.7
Thecc.09G107100 Theobroma cacao HOM05D005514 ORTHO05D006563 3.8e-102 376.7 318 65.4
QL02p045925 Quercus lobata HOM05D005514 ORTHO05D006563 3.6e-100 370.2 315 64.1
AUR62010955 Chenopodium quinoa HOM05D005514 ORTHO05D006563 5.7e-98 362.8 323 66.3
Dinv36656 Davidia involucrata HOM05D005514 ORTHO05D006563 1.7e-97 361.3 317 63.4
Gorai.004G280600 Gossypium raimondii HOM05D005514 ORTHO05D006563 8.2e-97 359.0 319 63.6
CiPaw.04G162600 Carya illinoinensis HOM05D005514 ORTHO05D006563 5.3e-96 356.3 321 62.3
Cfa003235 Carpinus fangiana HOM05D005514 ORTHO05D006563 2.0e-95 354.4 316 61.4
Hund09218 Selenicereus undatus HOM05D005514 ORTHO05D006563 3.5e-95 353.6 317 64.7
CiPaw.03G229100 Carya illinoinensis HOM05D005514 ORTHO05D006563 8.5e-94 349.0 316 61.7
Cc06_g09930 Coffea canephora HOM05D005514 ORTHO05D006563 5.5e-93 346.3 314 63.1
MD02G1042900 Malus domestica HOM05D005514 ORTHO05D006563 1.2e-92 345.1 317 61.5
Gohir.A08G241800 Gossypium hirsutum HOM05D005514 ORTHO05D006563 8.0e-92 342.4 319 61.4
Ciclev10008655m.g Citrus clementina HOM05D005514 ORTHO05D006563 2.3e-91 340.9 336 59.5
Oeu002248.1 Olea europaea HOM05D005514 ORTHO05D006563 1.1e-90 338.6 314 61.8
CANSAT02G0006 Cannabis sativa HOM05D005514 ORTHO05D006563 2.6e-90 337.4 320 60.3
RcHm_v2.0_Chr2g0089981 Rosa chinensis HOM05D005514 ORTHO05D006563 1.3e-89 335.1 319 61.8
CAN.G148.5 Capsicum annuum HOM05D005514 ORTHO05D006563 1.7e-89 334.7 312 62.2
Eucgr.C01267 Eucalyptus grandis HOM05D005514 ORTHO05D006563 4.8e-89 333.2 318 60.7
Atru.chr7.1371 Acer truncatum HOM05D005514 ORTHO05D006563 1.1e-88 332.0 335 58.8
EL10Ac8g18440 Beta vulgaris HOM05D005514 ORTHO05D006563 2.4e-88 330.9 322 62.1
Prupe.7G234000 Prunus persica HOM05D005514 ORTHO05D006563 2.4e-88 330.9 312 60.6
Duzib150G0489 Durio zibethinus HOM05D005514 ORTHO05D006563 5.3e-88 329.7 318 59.7
Nitab4.5_0000010g0010 Nicotiana tabacum HOM05D005514 ORTHO05D006563 5.3e-88 329.7 330 59.1
Peaxi162Scf00031g00232 Petunia axillaris HOM05D005514 ORTHO05D006563 4.5e-87 326.6 307 60.6
Manes.03G023100 Manihot esculenta HOM05D005514 ORTHO05D006563 5.0e-86 323.2 313 60.4
Nitab4.5_0000952g0010 Nicotiana tabacum HOM05D005514 ORTHO05D006563 5.0e-86 323.2 316 58.9
Sabra06G0124000 Salix brachista HOM05D005514 ORTHO05D006563 5.0e-86 323.2 315 57.8
Lalb_Chr24g0397401 Lupinus albus HOM05D005514 ORTHO05D006563 1.9e-85 321.2 319 58.0
Glyma.09G192400 Glycine max HOM05D005514 ORTHO05D006563 9.4e-85 318.9 317 58.4
Phvul.004G165700 Phaseolus vulgaris HOM05D005514 ORTHO05D006563 1.8e-83 314.7 319 59.9
VMungo0464G0467 Vigna mungo HOM05D005514 ORTHO05D006563 5.2e-83 313.2 316 58.9
FAN26G2817 Fragaria x ananassa HOM05D005514 ORTHO05D006563 8.8e-83 312.4 320 59.7
FvH4_1g04330 Fragaria vesca HOM05D005514 ORTHO05D006563 1.2e-82 312.0 320 60.0
FAN23G0542 Fragaria x ananassa HOM05D005514 ORTHO05D006563 8.3e-81 305.8 349 55.6
FAN19G0406 Fragaria x ananassa HOM05D005514 ORTHO05D006563 1.8e-80 304.7 319 59.2
arahy.Tifrunner.gnm1.ann1.LW2ZPS Arachis hypogaea HOM05D005514 ORTHO05D006563 1.6e-79 301.6 322 56.8
AUR62021464 Chenopodium quinoa HOM05D005514 ORTHO05D006563 2.0e-79 301.2 323 59.4
arahy.Tifrunner.gnm1.ann1.7WD3SA Arachis hypogaea HOM05D005514 ORTHO05D006563 1.0e-78 298.9 322 56.5
Glyma.07G084500 Glycine max HOM05D005514 ORTHO05D006563 1.3e-78 298.5 322 57.8
Ca_25539_v3 Cicer arietinum L. HOM05D005514 ORTHO05D006563 1.7e-78 298.1 330 57.3
HanXRQChr10g0318661 Helianthus annuus HOM05D005514 ORTHO05D006563 2.5e-77 294.3 333 57.1
Lalb_Chr22g0352701 Lupinus albus HOM05D005514 ORTHO05D006563 3.2e-77 293.9 316 56.3
Oeu064593.1 Olea europaea HOM05D005514 ORTHO05D006563 4.7e-76 290.0 339 53.1
Sc18g0001310 Simmondsia chinensis HOM05D005514 ORTHO05D006563 8.0e-76 289.3 316 55.4
MD15G1181700 Malus domestica HOM05D005514 ORTHO05D006563 1.4e-75 288.5 319 55.5
Medtr6g087890 Medicago truncatula HOM05D005514 ORTHO05D006563 2.3e-75 287.7 325 57.5
Lalb_Chr14g0371621 Lupinus albus HOM05D005514 ORTHO05D006563 1.5e-74 285.0 336 53.0
TAR383G0343 Trochodendron aralioides HOM05D001777 ORTHO05D001809 1.3e-73 282.0 321 54.8
Lj2g0026530 Lotus japonicus HOM05D005514 ORTHO05D006563 3.7e-73 280.4 361 51.2
ClCG06G008760 Citrullus lanatus HOM05D005514 ORTHO05D006563 8.3e-73 279.3 336 55.1
CsaV3_1G045730 Cucumis sativus L. HOM05D005514 ORTHO05D006563 8.3e-73 279.3 335 54.9
Psat1g044240 Pisum sativum HOM05D005514 ORTHO05D006563 1.8e-72 278.1 334 54.8
MSTRG.10624 Avicennia marina HOM05D005514 ORTHO05D006563 7.0e-72 276.2 307 54.7
PGSC0003DMG400027426 Solanum tuberosum HOM05D005514 ORTHO05D006563 7.0e-72 276.2 304 53.9
MELO3C024688.2 Cucumis melo HOM05D005514 ORTHO05D006563 9.1e-72 275.8 335 54.6
COL.COLO4_34823 Corchorus olitorius HOM05D005514 ORTHO05D006563 4.5e-71 273.5 318 52.5
Solyc05g018340.4 Solanum lycopersicum HOM05D005514 ORTHO05D006563 1.7e-70 271.6 304 53.3
Sopen05g015140 Solanum pennellii HOM05D005514 ORTHO05D006563 1.7e-70 271.6 304 53.3
Ah.07g205470 Amaranthus hybridus HOM05D005514 ORTHO05D006563 2.3e-70 271.2 325 55.4
ECA234G0189 Erigeron canadensis HOM05D005514 ORTHO05D006563 6.6e-70 269.6 334 53.3
TAR624G0612 Trochodendron aralioides HOM05D005514 ORTHO05D006563 1.5e-69 268.5 295 55.6
Potri.006G160500 Populus trichocarpa HOM05D005514 ORTHO05D006563 1.9e-69 268.1 315 51.7
TPR.G10049 Trifolium pratense HOM05D005514 ORTHO05D006563 2.8e-68 264.2 358 50.3
Cpa.g.sc23.79 Carica papaya HOM05D005514 ORTHO05D006563 1.4e-67 261.9 264 58.0
TWI23G1143 Tripterygium wilfordii HOM05D005514 ORTHO05D006563 1.5e-66 258.5 303 52.8
Potri.018G083100 Populus trichocarpa HOM05D005514 ORTHO05D006563 2.0e-66 258.1 333 50.2
PSO782G4531 Papaver somniferum HOM05D005514 ORTHO05D006563 7.5e-66 256.1 358 47.8
DCAR_028696 Daucus carota HOM05D005514 ORTHO05D006563 4.9e-65 253.4 353 47.3
PSO566G0157 Papaver somniferum HOM05D005514 ORTHO05D006563 1.2e-63 248.8 341 49.6
MSTRG.26360 Avicennia marina HOM05D005514 ORTHO05D006563 3.5e-63 247.3 315 47.9
Aqoxy7G01583 Aquilegia oxysepala HOM05D005514 ORTHO05D006563 5.9e-63 246.5 288 55.9
Sed0026603 Sechium edule HOM05D005514 ORTHO05D006563 3.9e-62 243.8 402 44.5
Nn2g11677 Nelumbo nucifera HOM05D005514 ORTHO05D006563 5.0e-62 243.4 321 49.2
PGR142G2557 Punica granatum HOM05D005514 ORTHO05D006563 1.5e-61 241.9 316 53.8
Haze_25771 Corylus avellana HOM05D005514 ORTHO05D006563 2.3e-59 234.6 244 56.6
Sed0015833 Sechium edule HOM05D005514 ORTHO05D006563 1.5e-58 231.9 331 49.8
THA.LOC104804022 Tarenaya hassleriana HOM05D005514 ORTHO05D006563 8.3e-57 226.1 325 48.6
GSVIVG01015362001 Vitis vinifera HOM05D005514 ORTHO05D006563 1.4e-56 225.3 190 63.2
MBI14_g08031_MAGBIO Magnolia biondii HOM05D005514 ORTHO05D006563 5.0e-54 216.9 363 44.4
Migut.K00501 Erythranthe guttata HOM05D005514 ORTHO05D006563 4.3e-53 213.8 302 47.4
MBI04_g19180_MAGBIO Magnolia biondii HOM05D005514 ORTHO05D006563 1.2e-52 212.2 320 47.5
Lj7A655G38 Lonicera japonica HOM05D005514 ORTHO05D006563 1.6e-52 211.8 239 55.2
THA.LOC104820053 Tarenaya hassleriana HOM05D005514 ORTHO05D006563 2.6e-50 204.5 323 45.5
SEGI_01979 Sequoiadendron giganteum HOM05D005514 ORTHO05D006563 1.7e-46 191.8 303 45.2
Sabra18G0070900 Salix brachista HOM05D005514 ORTHO05D006563 6.2e-44 183.3 213 52.6
ATR0315G038 Amborella trichopoda HOM05D005514 ORTHO05D006563 3.1e-43 181.0 335 42.1
Aa31LG8G17060 Aethionema arabicum HOM05D005514 ORTHO05D006563 7.6e-42 176.4 335 42.4
CDE05G1480 Ceratophyllum demersum HOM05D005514 ORTHO05D006563 1.6e-39 168.7 304 42.1
Thhalv10025603m.g Eutrema salsugineum HOM05D005514 ORTHO05D006563 6.0e-39 166.8 337 43.3
BcaNung00443 Brassica carinata HOM05D005514 ORTHO05D006563 1.1e-37 162.5 328 44.2
Carub.0007s1165 Capsella rubella HOM05D005514 ORTHO05D006563 1.1e-37 162.5 340 41.5
Sp7g26930 Schrenkiella parvula HOM05D005514 ORTHO05D006563 1.1e-37 162.5 332 43.7
CARHR236720 Cardamine hirsuta HOM05D005514 ORTHO05D006563 1.9e-37 161.8 334 43.7
BolC1t01016H Brassica oleracea HOM05D001777 ORTHO05D006510 3.3e-37 161.0 323 43.0
AL7G23470 Arabidopsis lyrata HOM05D005514 ORTHO05D006563 9.6e-37 159.5 343 41.1
Lsat_1_v5_gn_5_102941 Lactuca sativa HOM05D005514 ORTHO05D006563 2.8e-36 157.9 249 47.8
A01p08990 Brassica napus HOM05D001777 ORTHO05D006510 1.2e-34 152.5 318 43.4
C01p10530 Brassica napus HOM05D001777 ORTHO05D006510 2.6e-34 151.4 323 43.0
AT4G28990 Arabidopsis thaliana HOM05D005514 ORTHO05D006563 4.4e-34 150.6 337 40.9
Nn3g18098 Nelumbo nucifera HOM05D005514 ORTHO05D006563 3.8e-33 147.5 118 60.2
CDE05G2615 Ceratophyllum demersum HOM05D005514 ORTHO05D006563 7.1e-32 143.3 312 38.1
BcaNung01339 Brassica carinata HOM05D005514 ORTHO05D006563 9.3e-32 142.9 332 43.1
BraA03t14917Z Brassica rapa HOM05D005514 ORTHO05D006563 1.3e-30 139.0 330 38.2
BcaNung00440 Brassica carinata HOM05D005514 ORTHO05D006563 8.7e-30 136.3 360 38.1
BcaNung02893 Brassica carinata HOM05D005514 ORTHO05D006563 1.1e-27 129.4 327 38.5
C07p56560 Brassica napus HOM05D005514 ORTHO05D006563 1.1e-27 129.4 327 38.5
Zm00001eb147430 Zea mays HOM05D005514 ORTHO05D006563 1.5e-26 125.6 352 35.5
Os06g0332900 Oryza sativa ssp. japonica HOM05D005514 ORTHO05D006563 5.8e-26 123.6 339 35.1
BcaC09g51675 Brassica carinata HOM05D005514 ORTHO05D006563 2.2e-25 121.7 325 37.8
BolC7t46134H Brassica oleracea HOM05D005514 ORTHO05D006563 2.2e-25 121.7 296 39.2
HPP92_000517 Vanilla planifolia HOM05D005514 ORTHO05D006563 1.7e-22 112.1 298 36.9
Mapoly0001s0121 Marchantia polymorpha HOM05D005514 ORTHO05D006563 1.6e-20 105.5 310 36.1
Os02g0274700 Oryza sativa ssp. japonica HOM05D005514 ORTHO05D006563 1.3e-17 95.9 297 33.7
Pp3c14_23580 Physcomitrium patens HOM05D005514 ORTHO05D006563 1.3e-17 95.9 347 32.6
SEGI_18875 Sequoiadendron giganteum HOM05D005514 ORTHO05D006563 1.7e-17 95.5 336 34.8
SGA_v2.0_scaffold92G28280 Striga asiatica HOM05D005514 ORTHO05D006563 1.1e-16 92.8 192 41.1
SMO169G0168 Selaginella moellendorffii HOM05D005514 ORTHO05D006563 8.7e-14 83.2 125 44.0
AagrBONN_evm.TU.Sc2ySwM_344.197 Anthoceros agrestis HOM05D005514 ORTHO05D006563 9.6e-13 79.7 93 50.5
unitig_0.g2554 Utricularia gibba HOM05D005514 ORTHO05D006563 1.3e-12 79.3 146 41.8
Lsat_1_v5_gn_5_102961 Lactuca sativa HOM05D005514 ORTHO05D006563 2.0e-10 72.0 58 67.2
Cc06_g09940 Coffea canephora HOM05D005514 ORTHO05D006563 1.0e-09 69.7 71 59.2
SMO116G0230 Selaginella moellendorffii HOM05D005514 ORTHO05D006563 6.5e-09 67.0 37 73.0
CBR_g44542 Chara braunii HOM05D005514 ORTHO05D006563 6.0e-07 60.5 233 33.0
MD15G1181500 Malus domestica HOM05D005514 ORTHO05D006563 3.9e-06 57.8 59 61.0


User provided reference genes

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