Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro06178 Vaccinium macrocarpon HOM05D002931 ORTHO05D003273 4.7e-186 654.4 346 100.0
Rhsim03G0246600 Rhododendron simsii HOM05D002931 ORTHO05D003273 7.7e-128 461.1 347 71.8
CSS0021369 Camellia sinensis var. sinensis HOM05D002931 ORTHO05D003273 2.4e-73 280.0 350 53.7
CSS0026205 Camellia sinensis var. sinensis HOM05D002931 ORTHO05D003273 1.7e-71 273.9 322 51.9
Dinv36544 Davidia involucrata HOM05D002931 ORTHO05D003273 9.9e-67 258.1 389 44.7
Actinidia26402 Actinidia chinensis HOM05D002931 ORTHO05D003273 3.7e-66 256.1 319 53.9
Actinidia07433 Actinidia chinensis HOM05D002931 ORTHO05D003273 4.9e-66 255.8 331 52.0
CSS0048152 Camellia sinensis var. sinensis HOM05D002931 ORTHO05D003273 1.4e-60 237.7 306 52.9
Cfa003349 Carpinus fangiana HOM05D002931 ORTHO05D003273 1.5e-54 217.6 346 42.8
GSVIVG01015505001 Vitis vinifera HOM05D002931 ORTHO05D003273 2.8e-53 213.4 330 44.8
TAR636G1764 Trochodendron aralioides HOM05D002931 ORTHO05D003273 3.1e-52 209.9 342 43.9
Haze_25612 Corylus avellana HOM05D002931 ORTHO05D001597 9.0e-52 208.4 350 41.1
Rhsim03G0246800 Rhododendron simsii HOM05D002931 ORTHO05D003273 4.2e-49 199.5 341 41.9
QL02p087842 Quercus lobata HOM05D002931 ORTHO05D003273 7.8e-48 195.3 326 44.2
TAR625G1122 Trochodendron aralioides HOM05D002931 ORTHO05D003273 2.5e-46 190.3 343 39.9
CiPaw.03G242100 Carya illinoinensis HOM05D002931 ORTHO05D003273 5.6e-46 189.1 358 39.7
Manes.06G049800 Manihot esculenta HOM05D002931 ORTHO05D003273 1.3e-45 188.0 324 45.1
Nn8g39392 Nelumbo nucifera HOM05D002931 ORTHO05D003273 1.5e-43 181.0 331 39.9
Duzib168G0426 Durio zibethinus HOM05D002931 ORTHO05D003273 8.4e-42 175.3 348 39.9
RcHm_v2.0_Chr2g0089101 Rosa chinensis HOM05D002931 ORTHO05D003273 4.2e-41 172.9 340 39.1
Ciclev10007946m.g Citrus clementina HOM05D002931 ORTHO05D003273 9.3e-41 171.8 324 38.3
Dinv41530 Davidia involucrata HOM05D002931 ORTHO05D003273 9.3e-41 171.8 196 51.5
Atru.chr7.1207 Acer truncatum HOM05D002931 ORTHO05D003273 1.6e-40 171.0 324 40.7
Rhsim03G0246700 Rhododendron simsii HOM05D002931 ORTHO05D003273 7.9e-40 168.7 256 44.5
Thecc.09G123400 Theobroma cacao HOM05D002931 ORTHO05D003273 2.3e-39 167.2 360 36.9
CAN.G377.6 Capsicum annuum HOM05D002931 ORTHO05D003273 4.3e-38 162.9 363 37.7
Glyma.17G116200 Glycine max HOM05D002931 ORTHO05D003273 7.4e-38 162.2 351 36.8
Glyma.05G008000 Glycine max HOM05D002931 ORTHO05D003273 3.7e-37 159.8 351 36.5
TWI34G0601 Tripterygium wilfordii HOM05D002931 ORTHO05D003273 6.2e-37 159.1 308 38.3
Ca_21694_v3 Cicer arietinum L. HOM05D002931 ORTHO05D003273 1.4e-36 157.9 346 37.6
Nitab4.5_0001586g0140 Nicotiana tabacum HOM05D002931 ORTHO05D003273 7.6e-35 152.1 363 37.2
MBI04_g07629_MAGBIO Magnolia biondii HOM05D002931 ORTHO05D003273 6.4e-34 149.1 350 38.9
Lj4g0003419 Lotus japonicus HOM05D002931 ORTHO05D003273 1.9e-33 147.5 346 35.3
Nitab4.5_0007260g0040 Nicotiana tabacum HOM05D002931 ORTHO05D003273 2.5e-33 147.1 354 35.3
Lalb_Chr07g0178821 Lupinus albus HOM05D002931 ORTHO05D003273 7.1e-33 145.6 360 36.1
Nitab4.5_0003558g0040 Nicotiana tabacum HOM05D002931 ORTHO05D003273 2.1e-32 144.1 361 34.9
arahy.Tifrunner.gnm1.ann1.RS0TAB Arachis hypogaea HOM05D002931 ORTHO05D003273 2.3e-31 140.6 345 36.8
Medtr4g114040 Medicago truncatula HOM05D002931 ORTHO05D003273 3.0e-31 140.2 340 34.7
Prupe.7G239900 Prunus persica HOM05D002931 ORTHO05D003273 3.0e-31 140.2 319 36.1
Psat4g041000 Pisum sativum HOM05D002931 ORTHO05D003273 8.7e-31 138.7 342 36.5
TPR.G10690 Trifolium pratense HOM05D002931 ORTHO05D001597 1.1e-30 138.3 345 37.1
arahy.Tifrunner.gnm1.ann1.6CVH65 Arachis hypogaea HOM05D002931 ORTHO05D003273 1.5e-30 137.9 345 36.5
Peaxi162Scf00984g00118 Petunia axillaris HOM05D002931 ORTHO05D003273 1.5e-30 137.9 363 35.5
FAN26G2146 Fragaria x ananassa HOM05D002931 ORTHO05D003273 3.3e-30 136.7 302 38.7
COL.COLO4_05773 Corchorus olitorius HOM05D002931 ORTHO05D003273 7.4e-30 135.6 331 36.0
Cc06_g08760 Coffea canephora HOM05D002931 ORTHO05D003273 2.1e-29 134.0 315 36.5
Gohir.A13G199300 Gossypium hirsutum HOM05D002931 ORTHO05D003273 2.4e-28 130.6 316 35.8
Gorai.013G233700 Gossypium raimondii HOM05D002931 ORTHO05D003273 7.6e-27 125.6 318 35.5
Gohir.D13G204800 Gossypium hirsutum HOM05D002931 ORTHO05D003273 1.0e-26 125.2 318 35.2
MD00G1107100 Malus domestica HOM05D002931 ORTHO05D003273 1.3e-26 124.8 304 34.9
Aqoxy7G03732 Aquilegia oxysepala HOM05D002931 ORTHO05D003273 6.5e-26 122.5 384 32.8
Cpa.g.sc75.56 Carica papaya HOM05D002931 ORTHO05D003273 1.1e-25 121.7 272 36.4
Phvul.003G163100 Phaseolus vulgaris HOM05D002931 ORTHO05D003273 1.4e-25 121.3 314 35.0
VMungo1215G0028 Vigna mungo HOM05D002931 ORTHO05D003273 4.2e-25 119.8 313 34.5
Sopen12g002560 Solanum pennellii HOM05D002931 ORTHO05D003273 1.8e-23 114.4 341 34.9
Duzib150G1215 Durio zibethinus HOM05D002931 ORTHO05D003273 1.9e-22 110.9 218 36.7
PGSC0003DMG400020665 Solanum tuberosum HOM05D002931 ORTHO05D003273 2.5e-22 110.5 335 32.8
Solyc12g006620.2 Solanum lycopersicum HOM05D002931 ORTHO05D003273 3.3e-22 110.2 324 34.6
ClCG06G010940 Citrullus lanatus HOM05D002931 ORTHO05D003273 6.3e-21 105.9 340 34.4
ATR1156G042 Amborella trichopoda HOM05D002931 ORTHO05D003273 1.5e-19 101.3 341 31.4
Medtr4g114643 Medicago truncatula HOM05D002931 ORTHO05D003273 7.7e-19 99.0 265 32.1
ECA240G3654 Erigeron canadensis HOM05D002931 ORTHO05D003273 1.0e-18 98.6 345 34.2
Rhsim12G0182000 Rhododendron simsii HOM05D002931 ORTHO05D003273 3.2e-17 93.6 56 85.7
Rhsim03G0246900 Rhododendron simsii HOM05D000006 ORTHO05D000001 2.1e-16 90.9 89 59.6
MELO3C026646.2 Cucumis melo HOM05D002931 ORTHO05D003273 3.3e-14 83.6 332 30.4
Eucgr.C01135 Eucalyptus grandis HOM05D002931 ORTHO05D003273 1.7e-13 81.3 345 28.1
EL10Ac8g18619 Beta vulgaris HOM05D002931 ORTHO05D003273 2.2e-13 80.9 346 26.3
PSO017G4344 Papaver somniferum HOM05D002931 ORTHO05D003273 8.2e-13 79.0 328 29.9
Duzib150G0448 Durio zibethinus HOM05D002931 ORTHO05D003273 4.1e-12 76.6 98 52.0
PGR142G0735 Punica granatum HOM05D002931 ORTHO05D003273 9.1e-12 75.5 336 30.4
Sed0020732 Sechium edule HOM05D002931 ORTHO05D003273 1.5e-11 74.7 321 29.3
AUR62033480 Chenopodium quinoa HOM05D002931 ORTHO05D003273 5.9e-11 72.8 311 28.6
HanXRQChr09g0242351 Helianthus annuus HOM05D002931 ORTHO05D003273 1.4e-09 68.2 184 33.7
Ah.14g080270 Amaranthus hybridus HOM05D002931 ORTHO05D003273 3.2e-09 67.0 343 25.4
Hund09142 Selenicereus undatus HOM05D002931 ORTHO05D003273 5.5e-09 66.2 274 28.1
AUR62011091 Chenopodium quinoa HOM05D002931 ORTHO05D003273 7.9e-08 62.4 319 27.0
Hund04302 Selenicereus undatus HOM05D002931 ORTHO05D003273 1.8e-07 61.2 359 27.6
FvH4_1g03571 Fragaria vesca HOM05D002931 ORTHO05D003273 3.0e-07 60.5 116 41.4
Lj6C725G8 Lonicera japonica HOM05D002931 ORTHO05D003273 1.1e-06 58.5 336 27.1
CiPaw.06G057100 Carya illinoinensis HOM05D002931 ORTHO05D003273 9.7e-06 55.5 358 27.1


User provided reference genes

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