Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro06177 Vaccinium macrocarpon HOM05D004174 ORTHO05D004624 1.1e-253 879.4 440 100.0
Actinidia07434 Actinidia chinensis HOM05D004174 ORTHO05D004624 6.4e-196 687.6 441 78.7
Actinidia26403 Actinidia chinensis HOM05D004174 ORTHO05D004624 8.4e-196 687.2 441 78.7
Dinv36548 Davidia involucrata HOM05D004174 ORTHO05D004624 4.2e-195 684.9 404 82.7
Hma1.2p1_0665F.1_g199150 Hydrangea macrophylla HOM05D004174 ORTHO05D004624 1.3e-193 679.9 444 76.6
Cfa003346 Carpinus fangiana HOM05D004174 ORTHO05D004624 4.6e-186 654.8 443 74.7
Rhsim03G0246500 Rhododendron simsii HOM05D004174 ORTHO05D004624 1.7e-185 652.9 345 92.2
CiPaw.03G241700 Carya illinoinensis HOM05D004174 ORTHO05D004624 3.0e-185 652.1 448 74.8
Haze_25614 Corylus avellana HOM05D004174 ORTHO05D004624 6.6e-185 651.0 443 74.7
Prupe.7G239600 Prunus persica HOM05D004174 ORTHO05D004624 5.6e-184 647.9 443 74.5
TWI34G0924 Tripterygium wilfordii HOM05D004174 ORTHO05D004624 9.6e-184 647.1 438 75.1
Peaxi162Scf02490g00007 Petunia axillaris HOM05D004174 ORTHO05D004624 2.1e-183 646.0 444 73.4
CSS0035220 Camellia sinensis var. sinensis HOM05D004174 ORTHO05D004624 6.2e-183 644.4 399 81.5
Cc06_g08790 Coffea canephora HOM05D004174 ORTHO05D004624 2.6e-181 639.0 387 78.8
Hund09144 Selenicereus undatus HOM05D004174 ORTHO05D004624 1.7e-180 636.3 445 73.5
Thecc.09G123000 Theobroma cacao HOM05D004174 ORTHO05D004624 6.4e-180 634.4 445 73.5
Manes.14G130500 Manihot esculenta HOM05D004174 ORTHO05D004624 8.4e-180 634.0 446 73.1
Atru.chr7.1197 Acer truncatum HOM05D004174 ORTHO05D004624 1.1e-179 633.6 436 72.7
Oeu058056.1 Olea europaea HOM05D004174 ORTHO05D004624 3.2e-179 632.1 405 76.0
MD00G1107300 Malus domestica HOM05D004174 ORTHO05D004624 1.2e-178 630.2 444 72.5
TAR383G0558 Trochodendron aralioides HOM05D004174 ORTHO05D004624 1.2e-178 630.2 424 75.7
COL.COLO4_05761 Corchorus olitorius HOM05D004174 ORTHO05D004624 2.7e-178 629.0 414 76.3
MSTRG.19607 Avicennia marina HOM05D004174 ORTHO05D004624 4.6e-178 628.2 431 72.2
Gohir.D13G204700 Gossypium hirsutum HOM05D004174 ORTHO05D004624 4.6e-178 628.2 446 72.0
FvH4_1g03600 Fragaria vesca HOM05D004174 ORTHO05D004624 1.0e-177 627.1 443 72.5
MD02G1035600 Malus domestica HOM05D004174 ORTHO05D004624 1.0e-177 627.1 446 71.7
FAN19G0954 Fragaria x ananassa HOM05D004174 ORTHO05D004624 2.3e-177 625.9 443 72.2
Gohir.A13G199200 Gossypium hirsutum HOM05D004174 ORTHO05D004624 3.0e-177 625.5 448 71.4
Gorai.013G233600 Gossypium raimondii HOM05D004174 ORTHO05D004624 3.0e-177 625.5 446 71.7
FAN23G0992 Fragaria x ananassa HOM05D004174 ORTHO05D004624 3.9e-177 625.2 440 71.4
CANSAT11G0280 Cannabis sativa HOM05D004174 ORTHO05D004624 5.1e-177 624.8 440 72.0
Manes.06G050000 Manihot esculenta HOM05D004174 ORTHO05D004624 5.1e-177 624.8 442 72.4
RcHm_v2.0_Chr2g0089131 Rosa chinensis HOM05D004174 ORTHO05D004624 5.6e-176 621.3 416 73.8
EL10Ac8g18616 Beta vulgaris HOM05D004174 ORTHO05D004624 9.6e-176 620.5 441 72.6
FAN28G1355 Fragaria x ananassa HOM05D004174 ORTHO05D004624 1.3e-175 620.2 440 70.9
CAN.G1966.1 Capsicum annuum HOM05D004174 ORTHO05D004624 6.2e-175 617.8 435 72.0
Sopen06g031500 Solanum pennellii HOM05D004174 ORTHO05D004624 8.1e-175 617.5 448 71.9
PGSC0003DMG400024321 Solanum tuberosum HOM05D004174 ORTHO05D004624 1.4e-174 616.7 410 75.6
THA.LOC104811038 Tarenaya hassleriana HOM05D004174 ORTHO05D004624 1.8e-174 616.3 437 70.0
Ciclev10008313m.g Citrus clementina HOM05D004174 ORTHO05D004624 5.3e-174 614.8 421 72.4
Eucgr.C04181 Eucalyptus grandis HOM05D004174 ORTHO05D004624 9.0e-174 614.0 407 74.0
Nn8g39387 Nelumbo nucifera HOM05D004174 ORTHO05D004624 9.0e-174 614.0 440 70.9
SalBow3G2402 Salvia bowleyana HOM05D004174 ORTHO05D004624 4.5e-173 611.7 422 72.7
TWI32G1270 Tripterygium wilfordii HOM05D004174 ORTHO05D004624 9.9e-173 610.5 410 73.4
Duzib150G0384 Durio zibethinus HOM05D004174 ORTHO05D004624 3.8e-172 608.6 410 74.1
FAN26G3217 Fragaria x ananassa HOM05D004174 ORTHO05D004624 4.9e-172 608.2 442 70.6
QL02p087765 Quercus lobata HOM05D004174 ORTHO05D004624 4.9e-172 608.2 409 73.8
Solyc06g075080.4 Solanum lycopersicum HOM05D004174 ORTHO05D004624 8.4e-172 607.4 425 73.2
Nitab4.5_0006698g0010 Nicotiana tabacum HOM05D004174 ORTHO05D004624 1.4e-171 606.7 454 70.3
Sc18g0000710 Simmondsia chinensis HOM05D004174 ORTHO05D004624 1.4e-171 606.7 393 75.3
PGR102G0881 Punica granatum HOM05D004174 ORTHO05D004624 3.2e-171 605.5 412 72.1
Carub.0006s1845 Capsella rubella HOM05D004174 ORTHO05D004624 5.5e-171 604.7 445 68.8
AL6G31620 Arabidopsis lyrata HOM05D004174 ORTHO05D004624 7.1e-171 604.4 430 70.0
Duzib187G0531 Durio zibethinus HOM05D004174 ORTHO05D004624 1.6e-170 603.2 421 72.9
Aa31LG8G2170 Aethionema arabicum HOM05D004174 ORTHO05D004624 2.7e-170 602.4 441 68.0
THA.LOC104799651 Tarenaya hassleriana HOM05D004174 ORTHO05D004624 2.7e-170 602.4 411 70.6
Aqoxy7G02096 Aquilegia oxysepala HOM05D004174 ORTHO05D004624 7.9e-170 600.9 410 72.2
CARHR192760 Cardamine hirsuta HOM05D004174 ORTHO05D004624 1.3e-169 600.1 444 68.0
AT5G20070 Arabidopsis thaliana HOM05D004174 ORTHO05D004624 2.3e-169 599.4 422 69.7
Migut.J01169 Erythranthe guttata HOM05D004174 ORTHO05D004624 1.1e-168 597.0 385 74.3
HanXRQChr12g0368841 Helianthus annuus HOM05D004174 ORTHO05D004624 1.1e-168 597.0 419 71.8
Lsat_1_v5_gn_8_58900 Lactuca sativa HOM05D004174 ORTHO05D004624 1.1e-168 597.0 390 74.9
Potri.018G070400 Populus trichocarpa HOM05D004174 ORTHO05D004624 1.1e-168 597.0 442 68.8
SGA_v2.0_scaffold229G43324 Striga asiatica HOM05D004174 ORTHO05D004624 5.6e-168 594.7 423 70.0
COL.COLO4_17917 Corchorus olitorius HOM05D004174 ORTHO05D004624 1.3e-167 593.6 401 74.8
Thhalv10013566m.g Eutrema salsugineum HOM05D004174 ORTHO05D004624 1.3e-167 593.6 426 68.1
A02p06020 Brassica napus HOM05D004174 ORTHO05D004624 1.6e-167 593.2 406 72.2
BraA02t05553Z Brassica rapa HOM05D004174 ORTHO05D004624 1.6e-167 593.2 406 72.2
Medtr2g054680 Medicago truncatula HOM05D004174 ORTHO05D004624 2.1e-167 592.8 429 69.9
BcaC03g13730 Brassica carinata HOM05D004174 ORTHO05D004624 8.2e-167 590.9 408 71.6
Nitab4.5_0000106g0230 Nicotiana tabacum HOM05D004174 ORTHO05D004624 1.8e-166 589.7 431 71.2
BcaB01g04811 Brassica carinata HOM05D004174 ORTHO05D004624 3.1e-166 589.0 425 68.5
DCAR_017828 Daucus carota HOM05D004174 ORTHO05D004624 3.1e-166 589.0 407 71.7
Sp6g24340 Schrenkiella parvula HOM05D004174 ORTHO05D004624 4.0e-166 588.6 446 67.0
MELO3C004525.2 Cucumis melo HOM05D004174 ORTHO05D004624 9.0e-166 587.4 439 67.7
ClCG11G002850 Citrullus lanatus HOM05D004174 ORTHO05D004624 1.2e-165 587.0 408 70.3
BolC3t13612H Brassica oleracea HOM05D004174 ORTHO05D004624 5.8e-165 584.7 433 67.7
C03p11380 Brassica napus HOM05D004174 ORTHO05D004624 1.3e-164 583.6 433 67.4
Phvul.009G197200 Phaseolus vulgaris HOM05D004174 ORTHO05D004624 1.3e-164 583.6 406 71.4
Sed0019119 Sechium edule HOM05D004174 ORTHO05D004624 1.7e-164 583.2 408 70.1
Potri.006G154200 Populus trichocarpa HOM05D004174 ORTHO05D004624 2.2e-164 582.8 410 71.0
Lsat_1_v5_gn_7_42401 Lactuca sativa HOM05D004174 ORTHO05D004624 2.9e-164 582.4 387 72.6
Psat1g025760 Pisum sativum HOM05D004174 ORTHO05D004624 3.8e-164 582.0 440 68.4
Ca_03159_v3 Cicer arietinum L. HOM05D004174 ORTHO05D004624 4.9e-164 581.6 449 66.8
VMungo1309G2067 Vigna mungo HOM05D004174 ORTHO05D004624 4.9e-164 581.6 441 67.6
HanXRQChr06g0180241 Helianthus annuus HOM05D004174 ORTHO05D004624 1.4e-163 580.1 406 71.9
BNapus_Darmor_BZH_scaffold_38p01820 Brassica napus HOM05D004174 ORTHO05D004624 2.5e-163 579.3 406 71.2
CsaV3_2G002690 Cucumis sativus L. HOM05D004174 ORTHO05D004624 4.2e-163 578.6 410 68.8
Lalb_Chr23g0275331 Lupinus albus HOM05D004174 ORTHO05D004624 9.3e-163 577.4 447 67.1
MBI04_g24208_MAGBIO Magnolia biondii HOM05D004174 ORTHO05D004624 1.2e-162 577.0 416 70.4
A03p09800 Brassica napus HOM05D004174 ORTHO05D004624 3.5e-162 575.5 417 69.1
BraA03t10295Z Brassica rapa HOM05D004174 ORTHO05D004624 3.5e-162 575.5 417 69.1
BcaB05g22875 Brassica carinata HOM05D004174 ORTHO05D004624 4.6e-162 575.1 406 69.5
TPR.G31095 Trifolium pratense HOM05D004174 ORTHO05D004624 1.8e-161 573.2 450 66.7
Sabra18G0061500 Salix brachista HOM05D004174 ORTHO05D004624 2.3e-161 572.8 426 69.0
Glyma.06G216700 Glycine max HOM05D004174 ORTHO05D004624 6.7e-161 571.2 442 68.6
HanXRQChr03g0062501 Helianthus annuus HOM05D004174 ORTHO05D004624 8.7e-161 570.9 390 71.5
Dinv41532 Davidia involucrata HOM05D004174 ORTHO05D004624 1.6e-159 566.6 344 81.7
MD15G1175700 Malus domestica HOM05D004174 ORTHO05D004624 2.0e-157 559.7 496 62.1
PSO170G6838 Papaver somniferum HOM05D004174 ORTHO05D004624 2.0e-157 559.7 420 68.3
Lj1g0010752 Lotus japonicus HOM05D004174 ORTHO05D004624 4.5e-157 558.5 431 67.7
DCAR_009201 Daucus carota HOM05D004174 ORTHO05D004624 5.9e-157 558.1 390 69.5
PSO455G0049 Papaver somniferum HOM05D004174 ORTHO05D004624 5.9e-157 558.1 422 68.5
Gohir.D08G260000 Gossypium hirsutum HOM05D004174 ORTHO05D004624 9.4e-155 550.8 402 67.9
Gorai.004G277900 Gossypium raimondii HOM05D004174 ORTHO05D004624 3.6e-154 548.9 418 66.5
Lalb_Chr08g0234871 Lupinus albus HOM05D004174 ORTHO05D004624 6.1e-154 548.1 408 67.9
GSVIVG01015501001 Vitis vinifera HOM05D004174 ORTHO05D004624 4.8e-151 538.5 310 83.2
ATR1156G006 Amborella trichopoda HOM05D004174 ORTHO05D004624 8.2e-151 537.7 419 67.3
AUR62033476 Chenopodium quinoa HOM05D004174 ORTHO05D004624 1.4e-150 537.0 441 64.4
ECA240G3275 Erigeron canadensis HOM05D004174 ORTHO05D004624 6.5e-148 528.1 327 77.1
Glyma.17G116600 Glycine max HOM05D004174 ORTHO05D004624 1.6e-146 523.5 409 64.5
arahy.Tifrunner.gnm1.ann1.SBVG8E Arachis hypogaea HOM05D004174 ORTHO05D004624 8.8e-145 517.7 407 63.6
MELO3C026643.2 Cucumis melo HOM05D004174 ORTHO05D004624 5.7e-144 515.0 391 64.7
CDE02G3646 Ceratophyllum demersum HOM05D004174 ORTHO05D004624 1.3e-143 513.8 387 67.2
Medtr4g113990 Medicago truncatula HOM05D004174 ORTHO05D004624 1.3e-143 513.8 389 66.3
TPR.G10694 Trifolium pratense HOM05D004174 ORTHO05D004624 2.8e-143 512.7 434 61.8
arahy.Tifrunner.gnm1.ann1.E6UBTJ Arachis hypogaea HOM05D004174 ORTHO05D004624 4.8e-143 511.9 419 62.3
Psat4g040360 Pisum sativum HOM05D004174 ORTHO05D004624 1.1e-142 510.8 389 65.0
Lalb_Chr07g0178801 Lupinus albus HOM05D004174 ORTHO05D004624 1.4e-142 510.4 385 66.2
Phvul.003G162700 Phaseolus vulgaris HOM05D004174 ORTHO05D004624 1.2e-141 507.3 389 65.8
Sed0008859 Sechium edule HOM05D004174 ORTHO05D004624 4.5e-141 505.4 422 61.1
VMungo1215G2625 Vigna mungo HOM05D004174 ORTHO05D004624 5.9e-141 505.0 389 65.6
HPP92_000685 Vanilla planifolia HOM05D004174 ORTHO05D004624 8.5e-140 501.1 388 64.4
HPP92_000661 Vanilla planifolia HOM05D004174 ORTHO05D004624 1.6e-138 496.9 419 61.3
Zm00001eb377430 Zea mays HOM05D004174 ORTHO05D004624 4.1e-134 482.3 416 61.3
Os06g0141166 Oryza sativa ssp. japonica HOM05D004174 ORTHO05D004624 1.6e-130 470.3 402 60.9
SEGI_17043 Sequoiadendron giganteum HOM05D004174 ORTHO05D004624 1.8e-126 456.8 387 59.9
FAN26G0665 Fragaria x ananassa HOM05D004174 ORTHO05D004624 2.7e-125 453.0 264 81.8
ClCG06G010920 Citrullus lanatus HOM05D004174 ORTHO05D004624 4.2e-123 445.7 391 56.0
Lj7A632G45 Lonicera japonica HOM05D004174 ORTHO05D004624 3.7e-119 432.6 279 75.6
Ah.02g124290 Amaranthus hybridus HOM05D004174 ORTHO05D004624 1.2e-109 401.0 250 75.2
Ah.14g080300 Amaranthus hybridus HOM05D004174 ORTHO05D004624 2.0e-109 400.2 246 75.6
Gohir.A08G239300 Gossypium hirsutum HOM05D004174 ORTHO05D004624 6.6e-108 395.2 282 68.1
AagrBONN_evm.TU.Sc2ySwM_368.699 Anthoceros agrestis HOM05D004174 ORTHO05D004624 2.5e-99 366.7 396 50.0
Pp3c3_2090 Physcomitrium patens HOM05D004174 ORTHO05D004624 1.9e-94 350.5 346 50.3
Lj4A460T58 Lonicera japonica HOM05D004174 ORTHO05D004624 5.4e-94 349.0 234 73.1
Lj4g0002160 Lotus japonicus HOM05D004174 ORTHO05D004624 4.6e-93 345.9 281 62.6
SEGI_09002 Sequoiadendron giganteum HOM05D004174 ORTHO05D004624 7.8e-93 345.1 272 58.5
Mapoly0103s0044 Marchantia polymorpha HOM05D004174 ORTHO05D004624 6.8e-89 332.0 378 47.1
SMO169G0291 Selaginella moellendorffii HOM05D004174 ORTHO05D004624 1.2e-88 331.3 250 62.8
AUR62030487 Chenopodium quinoa HOM05D004174 ORTHO05D004624 4.6e-77 292.7 172 81.4
AUR62011109 Chenopodium quinoa HOM05D004174 ORTHO05D004624 3.3e-75 286.6 197 73.1
SEGI_03330 Sequoiadendron giganteum HOM05D004174 ORTHO05D004624 5.8e-64 249.2 294 43.5
Glyma.05G008302 Glycine max HOM05D004174 ORTHO05D004624 7.6e-64 248.8 176 68.2
BolC2t07007H Brassica oleracea HOM05D004174 ORTHO05D004624 1.6e-61 241.1 202 60.4
AUR62011090 Chenopodium quinoa HOM05D003948 ORTHO05D004610 5.1e-52 209.5 201 59.2
Cpa.g.sc648.3 Carica papaya HOM05D004174 ORTHO05D004624 4.3e-51 206.5 199 55.3
Ah.14g080310 Amaranthus hybridus HOM05D004174 ORTHO05D004624 6.9e-49 199.1 190 57.4
AUR62015314 Chenopodium quinoa HOM05D004174 ORTHO05D004624 9.3e-46 188.7 226 48.7
Cc11_g15180 Coffea canephora HOM05D004174 ORTHO05D004624 1.3e-42 178.3 119 76.5
Cre09.g396900 Chlamydomonas reinhardtii HOM05D004174 ORTHO05D004624 3.7e-42 176.8 227 41.9
MD02G1035400 Malus domestica HOM05D004174 ORTHO05D004624 3.9e-36 156.8 82 85.4
Haze_27339 Corylus avellana HOM05D004174 ORTHO05D004624 3.1e-33 147.1 164 50.6
Sabra06G0122300 Salix brachista HOM05D004174 ORTHO05D004624 1.2e-32 145.2 241 39.8
Cfa023976 Carpinus fangiana HOM05D003934 ORTHO05D005108 5.9e-32 142.9 368 30.2
SEGI_13131 Sequoiadendron giganteum HOM05D004174 ORTHO05D004624 7.7e-32 142.5 304 32.6
Pp3c14_12120 Physcomitrium patens HOM05D004174 ORTHO05D004624 6.1e-29 132.9 252 35.7
Lj4C460T3 Lonicera japonica HOM05D004174 ORTHO05D004624 1.7e-26 124.8 76 75.0
Mapoly0019s0154 Marchantia polymorpha HOM05D004174 ORTHO05D004624 9.1e-25 119.0 261 34.1
MCO10G159 Micromonas commoda HOM05D004174 ORTHO05D004624 9.1e-25 119.0 338 29.6
Ah.12g053390 Amaranthus hybridus HOM05D004174 ORTHO05D004624 1.2e-24 118.6 63 84.1
Ah.12g055680 Amaranthus hybridus HOM05D004174 ORTHO05D004624 3.5e-24 117.1 63 82.5
Ah.05g171270 Amaranthus hybridus HOM05D004174 ORTHO05D004624 5.9e-24 116.3 63 82.5
CBR_g46446 Chara braunii HOM05D004174 ORTHO05D004624 1.1e-19 102.1 121 47.1
PRCOL_00006603 Prasinoderma coloniale HOM05D004174 ORTHO05D004624 1.8e-17 94.7 141 36.2
VMungo0647G2130 Vigna mungo HOM05D004174 ORTHO05D004624 1.3e-15 88.6 146 38.4
Cre13.g582476 Chlamydomonas reinhardtii HOM05D004174 ORTHO05D004624 1.7e-15 88.2 204 32.4
Psat3g000160 Pisum sativum HOM05D004174 ORTHO05D004624 3.0e-12 77.4 100 43.0
VMungo1215G0447 Vigna mungo HOM05D006361 ORTHO05D007824 2.2e-10 71.2 74 48.6
Ah.12g053410 Amaranthus hybridus HOM05D004174 ORTHO05D004624 6.3e-10 69.7 38 81.6
SMO141G0190 Selaginella moellendorffii HOM05D004174 ORTHO05D004624 5.4e-09 66.6 119 38.7
TAR623G0918 Trochodendron aralioides HOM05D005723 ORTHO05D005968 5.5e-06 56.6 140 32.1


User provided reference genes

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