Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro06122 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 1.7e-100 369.4 189 100.0
vmacro06182 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 1.7e-100 369.4 189 100.0
Rhsim03G0247400 Rhododendron simsii HOM05D006513 ORTHO05D008150 2.6e-85 318.9 191 85.9
Actinidia26398 Actinidia chinensis HOM05D006513 ORTHO05D008150 2.8e-79 298.9 189 80.4
Cc06_g08720 Coffea canephora HOM05D006513 ORTHO05D008150 1.9e-72 276.2 189 72.0
Dinv41526 Davidia involucrata HOM05D006513 ORTHO05D008150 4.3e-72 275.0 188 72.3
Hma1.2p1_0665F.1_g199090 Hydrangea macrophylla HOM05D006513 ORTHO05D008150 5.6e-72 274.6 189 73.0
CSS0037158 Camellia sinensis var. sinensis HOM05D006513 ORTHO05D008150 2.8e-71 272.3 192 72.9
Actinidia07430 Actinidia chinensis HOM05D006513 ORTHO05D008150 4.7e-71 271.6 191 75.9
CiPaw.03G242700 Carya illinoinensis HOM05D006513 ORTHO05D008150 6.4e-68 261.2 189 68.8
Haze_25608 Corylus avellana HOM05D006513 ORTHO05D008150 1.3e-65 253.4 186 68.8
Lsat_1_v5_gn_7_45681 Lactuca sativa HOM05D006513 ORTHO05D008150 1.9e-64 249.6 186 68.3
Manes.06G049600 Manihot esculenta HOM05D006513 ORTHO05D008150 1.9e-64 249.6 189 66.1
PGR102G1904 Punica granatum HOM05D006513 ORTHO05D008150 4.3e-64 248.4 190 66.8
GSVIVG01015511001 Vitis vinifera HOM05D006513 ORTHO05D008150 5.6e-64 248.1 189 67.7
Sed0011750 Sechium edule HOM05D006513 ORTHO05D008150 2.1e-63 246.1 189 65.1
TPR.G10698 Trifolium pratense HOM05D006513 ORTHO05D008150 2.1e-63 246.1 195 65.6
Eucgr.C04187 Eucalyptus grandis HOM05D006513 ORTHO05D008150 2.8e-63 245.7 190 64.7
Manes.14G131100 Manihot esculenta HOM05D006513 ORTHO05D008150 2.8e-63 245.7 189 65.6
Sabra18G0060100 Salix brachista HOM05D006513 ORTHO05D008150 2.8e-63 245.7 190 67.9
Potri.018G066700 Populus trichocarpa HOM05D006513 ORTHO05D008150 1.4e-62 243.4 190 66.8
HanXRQChr09g0242331 Helianthus annuus HOM05D006513 ORTHO05D008150 1.8e-62 243.0 191 66.0
ECA240G2511 Erigeron canadensis HOM05D006513 ORTHO05D008150 2.3e-62 242.7 190 66.8
TWI34G1228 Tripterygium wilfordii HOM05D006513 ORTHO05D008150 2.3e-62 242.7 189 65.1
Nitab4.5_0002556g0080 Nicotiana tabacum HOM05D006513 ORTHO05D008150 3.1e-62 242.3 191 64.9
Nitab4.5_0007523g0020 Nicotiana tabacum HOM05D006513 ORTHO05D008150 6.8e-62 241.1 191 64.4
Psat4g039440 Pisum sativum HOM05D006513 ORTHO05D008150 1.5e-61 240.0 196 65.3
Ciclev10009612m.g Citrus clementina HOM05D006513 ORTHO05D008150 2.0e-61 239.6 190 66.8
Gorai.001G041200 Gossypium raimondii HOM05D006513 ORTHO05D008150 2.0e-61 239.6 189 63.5
Gohir.A07G035100 Gossypium hirsutum HOM05D006513 ORTHO05D008150 3.4e-61 238.8 189 63.5
Sp6g24280 Schrenkiella parvula HOM05D006513 ORTHO05D008150 3.4e-61 238.8 190 66.8
Gohir.D07G039100 Gossypium hirsutum HOM05D006513 ORTHO05D008150 4.4e-61 238.4 189 63.5
A02p06050 Brassica napus HOM05D006513 ORTHO05D008150 5.8e-61 238.0 190 65.8
BraA02t05556Z Brassica rapa HOM05D006513 ORTHO05D008150 5.8e-61 238.0 190 65.8
PSO455G0031 Papaver somniferum HOM05D006513 ORTHO05D008150 5.8e-61 238.0 190 64.2
Thecc.09G123900 Theobroma cacao HOM05D006513 ORTHO05D008150 5.8e-61 238.0 189 62.4
BcaC03g13734 Brassica carinata HOM05D006513 ORTHO05D008150 7.5e-61 237.7 190 64.7
BcaB05g22870 Brassica carinata HOM05D006513 ORTHO05D008150 9.8e-61 237.3 190 65.8
BolC2t07016H Brassica oleracea HOM05D006513 ORTHO05D008150 9.8e-61 237.3 190 64.7
CANSAT11G2038 Cannabis sativa HOM05D006513 ORTHO05D008150 9.8e-61 237.3 189 63.0
Lj4g0014130 Lotus japonicus HOM05D006513 ORTHO05D008150 9.8e-61 237.3 195 63.1
PSO170G2269 Papaver somniferum HOM05D006513 ORTHO05D008150 1.3e-60 236.9 190 64.7
Peaxi162Scf00984g00021 Petunia axillaris HOM05D006513 ORTHO05D008150 1.3e-60 236.9 190 65.3
CARHR192710 Cardamine hirsuta HOM05D006513 ORTHO05D008150 4.9e-60 235.0 190 63.7
Hma1.2p1_3730F.1_g337400 Hydrangea macrophylla HOM05D006513 ORTHO05D008150 6.4e-60 234.6 192 64.1
arahy.Tifrunner.gnm1.ann1.7JIW3E Arachis hypogaea HOM05D006513 ORTHO05D008150 1.1e-59 233.8 196 61.7
THA.LOC104799645 Tarenaya hassleriana HOM05D006513 ORTHO05D008150 1.1e-59 233.8 190 64.7
TWI63G1281 Tripterygium wilfordii HOM05D006513 ORTHO05D008150 1.4e-59 233.4 193 63.2
CAN.G377.11 Capsicum annuum HOM05D006513 ORTHO05D008150 2.4e-59 232.6 190 63.7
Phvul.003G163500 Phaseolus vulgaris HOM05D006513 ORTHO05D008150 2.4e-59 232.6 196 64.8
Glyma.13G168100 Glycine max HOM05D006513 ORTHO05D008150 3.2e-59 232.3 196 64.3
Glyma.17G115800 Glycine max HOM05D006513 ORTHO05D008150 3.2e-59 232.3 196 64.3
Prupe.7G240600 Prunus persica HOM05D006513 ORTHO05D008150 3.2e-59 232.3 190 64.2
AL6G31670 Arabidopsis lyrata HOM05D006513 ORTHO05D008150 4.1e-59 231.9 190 64.2
Thhalv10014769m.g Eutrema salsugineum HOM05D006513 ORTHO05D008150 4.1e-59 231.9 190 65.3
Duzib187G1241 Durio zibethinus HOM05D006513 ORTHO05D008150 7.0e-59 231.1 189 60.8
Carub.0006s1850 Capsella rubella HOM05D006513 ORTHO05D008150 9.2e-59 230.7 190 63.7
Solyc12g006660.2 Solanum lycopersicum HOM05D006513 ORTHO05D008150 1.2e-58 230.3 189 61.9
Sopen12g002610 Solanum pennellii HOM05D006513 ORTHO05D008150 1.6e-58 229.9 189 61.4
AT5G20120 Arabidopsis thaliana HOM05D006513 ORTHO05D008150 2.1e-58 229.6 190 64.2
BNapus_Darmor_BZH_scaffold_38p01790 Brassica napus HOM05D006513 ORTHO05D008150 1.0e-57 227.3 196 63.3
MD02G1034700 Malus domestica HOM05D006513 ORTHO05D008150 5.1e-57 224.9 188 64.4
PGSC0003DMG401020668 Solanum tuberosum HOM05D006513 ORTHO05D008150 5.1e-57 224.9 189 60.8
Lalb_Chr12g0197841 Lupinus albus HOM05D006513 ORTHO05D008150 6.6e-57 224.6 200 62.0
Sed0002363 Sechium edule HOM05D006513 ORTHO05D008150 8.6e-57 224.2 190 61.6
Aa31LG1G14240 Aethionema arabicum HOM05D006513 ORTHO05D008150 1.5e-56 223.4 190 62.1
Ah.09g225970 Amaranthus hybridus HOM05D006513 ORTHO05D008150 1.5e-56 223.4 186 61.8
Duzib150G1190 Durio zibethinus HOM05D006513 ORTHO05D008150 1.5e-56 223.4 185 60.0
Lalb_Chr13g0301941 Lupinus albus HOM05D006513 ORTHO05D008150 1.5e-56 223.4 200 61.0
Oeu021588.1 Olea europaea HOM05D006513 ORTHO05D008150 2.5e-56 222.6 159 69.8
QL02p087926 Quercus lobata HOM05D006513 ORTHO05D008150 2.5e-56 222.6 251 50.2
Aqoxy7G02130 Aquilegia oxysepala HOM05D006513 ORTHO05D008150 4.3e-56 221.9 189 63.5
Gohir.A08G239200 Gossypium hirsutum HOM05D006513 ORTHO05D008150 7.3e-56 221.1 189 60.3
Medtr4g114105 Medicago truncatula HOM05D006513 ORTHO05D008150 7.3e-56 221.1 184 62.5
EL10Ac8g18628 Beta vulgaris HOM05D006513 ORTHO05D008150 9.5e-56 220.7 186 60.8
RcHm_v2.0_Chr2g0089051 Rosa chinensis HOM05D006513 ORTHO05D008150 1.6e-55 219.9 188 63.3
Sc08g0006720 Simmondsia chinensis HOM05D006513 ORTHO05D008150 8.1e-55 217.6 190 61.1
FvH4_1g03550 Fragaria vesca HOM05D006513 ORTHO05D008150 1.4e-54 216.9 188 61.7
FAN19G1517 Fragaria x ananassa HOM05D006513 ORTHO05D008150 1.4e-54 216.9 188 61.7
FAN28G2022 Fragaria x ananassa HOM05D006513 ORTHO05D008150 4.0e-54 215.3 188 61.2
Nn2g12003 Nelumbo nucifera HOM05D006513 ORTHO05D008150 4.0e-54 215.3 189 60.3
FAN26G1752 Fragaria x ananassa HOM05D006513 ORTHO05D008150 5.2e-54 214.9 188 61.2
THA.LOC104811035 Tarenaya hassleriana HOM05D006513 ORTHO05D008150 2.6e-53 212.6 177 63.3
AUR62033489 Chenopodium quinoa HOM05D006513 ORTHO05D008150 4.4e-53 211.8 191 59.7
Gorai.004G277700 Gossypium raimondii HOM05D006513 ORTHO05D008150 2.2e-52 209.5 223 52.5
HanXRQChr03g0062541 Helianthus annuus HOM05D006513 ORTHO05D008150 3.7e-52 208.8 190 58.9
TAR625G1184 Trochodendron aralioides HOM05D006513 ORTHO05D008150 1.4e-51 206.8 163 66.3
Nn8g39411 Nelumbo nucifera HOM05D006513 ORTHO05D008150 3.2e-51 205.7 189 57.7
CsaV3_1G029880 Cucumis sativus L. HOM05D006513 ORTHO05D008150 2.7e-50 202.6 150 62.0
MD15G1175500 Malus domestica HOM05D006513 ORTHO05D008150 7.8e-50 201.1 188 59.0
MELO3C010361.2 Cucumis melo HOM05D006513 ORTHO05D008150 6.6e-49 198.0 142 66.2
Lj7A631T29 Lonicera japonica HOM05D006513 ORTHO05D008150 5.6e-48 194.9 144 66.7
MBI01_g37808_MAGBIO Magnolia biondii HOM05D006513 ORTHO05D008150 4.7e-47 191.8 189 54.5
Ca_21690_v3 Cicer arietinum L. HOM05D006513 ORTHO05D008150 6.2e-47 191.4 152 60.5
arahy.Tifrunner.gnm1.ann1.PME717 Arachis hypogaea HOM05D006513 ORTHO05D008150 2.4e-46 189.5 191 57.1
AUR62011112 Chenopodium quinoa HOM05D000667 ORTHO05D002614 3.1e-46 189.1 161 61.5
TAR626G1980 Trochodendron aralioides HOM05D006513 ORTHO05D008150 3.4e-45 185.7 145 67.6
Duzib168G2120 Durio zibethinus HOM05D006513 ORTHO05D008150 2.2e-44 183.0 156 58.3
ClCG06G010970 Citrullus lanatus HOM05D006513 ORTHO05D008150 2.5e-40 169.5 161 53.4
HPP92_002794 Vanilla planifolia HOM05D006513 ORTHO05D008150 2.0e-37 159.8 189 48.1
Hund26496 Selenicereus undatus HOM05D006513 ORTHO05D008150 4.2e-35 152.1 134 55.2
SEGI_29438 Sequoiadendron giganteum HOM05D006513 ORTHO05D008150 2.8e-31 139.4 191 42.9
VMungo1215G0117 Vigna mungo HOM05D006513 ORTHO05D008150 3.6e-31 139.0 191 47.1
ATR1156G011 Amborella trichopoda HOM05D006513 ORTHO05D008150 3.1e-30 136.0 181 42.5
Rhsim02G0222800 Rhododendron simsii HOM05D006513 ORTHO05D008150 4.9e-28 128.6 75 82.7
Nitab4.5_0017656g0020 Nicotiana tabacum HOM05D006513 ORTHO05D008150 1.6e-26 123.6 96 65.6
Gohir.D08G259900 Gossypium hirsutum HOM05D006513 ORTHO05D008150 4.6e-26 122.1 103 59.2
Duzib150G1040 Durio zibethinus HOM05D006513 ORTHO05D008150 1.8e-25 120.2 94 59.6
Pp3c5_25700 Physcomitrium patens HOM05D006513 ORTHO05D008150 6.7e-25 118.2 120 48.3
Mapoly0015s0101 Marchantia polymorpha HOM05D006513 ORTHO05D008150 1.3e-23 114.0 160 36.9
COL.COLO4_05780 Corchorus olitorius HOM05D006513 ORTHO05D008150 1.6e-23 113.6 87 64.4
AagrBONN_evm.TU.Sc2ySwM_340.153 Anthoceros agrestis HOM05D006513 ORTHO05D008150 3.7e-23 112.5 163 36.2
Nitab4.5_0010819g0020 Nicotiana tabacum HOM05D005868 ORTHO05D006964 2.4e-22 109.8 89 61.8
CBR_g6525 Chara braunii HOM05D006513 ORTHO05D008150 7.1e-19 98.2 142 33.8
TAR636G0633 Trochodendron aralioides HOM05D005966 ORTHO05D007584 4.6e-18 95.5 87 58.6
vmacro22116 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 6.7e-17 91.7 96 61.5
TAR090G0005 Trochodendron aralioides HOM05D006513 ORTHO05D008150 5.3e-14 82.0 66 66.7
HPP92_027747 Vanilla planifolia HOM05D006513 ORTHO05D008150 1.5e-13 80.5 100 49.0
Pp3c25_13070 Physcomitrium patens HOM05D006513 ORTHO05D008150 6.7e-09 65.1 117 30.8
AUR62043674 Chenopodium quinoa HOM05D006513 ORTHO05D003876 3.3e-08 62.8 45 66.7


User provided reference genes

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