Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro06093 Vaccinium macrocarpon HOM05D003067 ORTHO05D009378 9.1e-147 523.5 250 100.0
Rhsim03G0256100 Rhododendron simsii HOM05D003779 ORTHO05D002678 3.0e-73 279.3 248 62.5
Dinv41400 Davidia involucrata HOM05D003067 ORTHO05D009378 2.0e-53 213.4 282 45.0
Hma1.2p1_0028F.1_g017380 Hydrangea macrophylla HOM05D003067 ORTHO05D009378 3.0e-49 199.5 252 45.2
Nitab4.5_0001478g0120 Nicotiana tabacum HOM05D003067 ORTHO05D009378 3.6e-42 176.0 272 40.1
Peaxi162Scf00108g00714 Petunia axillaris HOM05D003067 ORTHO05D009378 8.8e-41 171.4 268 38.8
Actinidia38680 Actinidia chinensis HOM05D003067 ORTHO05D009378 1.8e-38 163.7 232 42.2
QL02p092630 Quercus lobata HOM05D003067 ORTHO05D009378 5.3e-38 162.2 288 39.2
Ciclev10009097m.g Citrus clementina HOM05D003067 ORTHO05D009378 1.2e-37 161.0 266 41.0
Cc06_g15260 Coffea canephora HOM05D003067 ORTHO05D009378 7.7e-37 158.3 281 37.4
CAN.G551.28 Capsicum annuum HOM05D003067 ORTHO05D009378 2.9e-36 156.4 273 37.4
Oeu021253.1 Olea europaea HOM05D003067 ORTHO05D009378 3.8e-36 156.0 268 38.8
Thecc.09G033900 Theobroma cacao HOM05D003067 ORTHO05D009378 5.0e-36 155.6 269 36.8
Potri.018G110300 Populus trichocarpa HOM05D003067 ORTHO05D009378 8.5e-36 154.8 277 39.0
Nitab4.5_0002315g0060 Nicotiana tabacum HOM05D003067 ORTHO05D009378 1.1e-35 154.5 261 36.4
Haze_19237 Corylus avellana HOM05D003067 ORTHO05D009378 1.4e-35 154.1 294 36.1
CANSAT11G2322 Cannabis sativa HOM05D003067 ORTHO05D009378 1.9e-35 153.7 270 37.4
TWI34G0508 Tripterygium wilfordii HOM05D003067 ORTHO05D009378 2.5e-35 153.3 275 37.5
CiPaw.16G115000 Carya illinoinensis HOM05D003067 ORTHO05D009378 3.2e-35 152.9 271 37.6
HanXRQChr05g0133261 Helianthus annuus HOM05D003067 ORTHO05D009378 3.2e-35 152.9 254 37.0
Lsat_1_v5_gn_8_59821 Lactuca sativa HOM05D003067 ORTHO05D009378 3.2e-35 152.9 257 40.5
Potri.006G187500 Populus trichocarpa HOM05D003067 ORTHO05D009378 4.2e-35 152.5 274 39.4
FvH4_1g01190 Fragaria vesca HOM05D003067 ORTHO05D009378 2.7e-34 149.8 269 37.2
Prupe.7G260000 Prunus persica HOM05D003067 ORTHO05D009378 2.7e-34 149.8 259 40.5
FAN28G0267 Fragaria x ananassa HOM05D003067 ORTHO05D009378 3.6e-34 149.4 267 36.7
Atru.chr7.146 Acer truncatum HOM05D003067 ORTHO05D009378 3.0e-33 146.4 261 38.3
Cfa020848 Carpinus fangiana HOM05D003067 ORTHO05D007251 6.7e-33 145.2 261 36.4
Nn2g12305 Nelumbo nucifera HOM05D003067 ORTHO05D009378 6.7e-33 145.2 285 37.9
RcHm_v2.0_Chr2g0085991 Rosa chinensis HOM05D003067 ORTHO05D009378 4.4e-32 142.5 271 36.9
Gohir.D07G030100 Gossypium hirsutum HOM05D003067 ORTHO05D009378 9.7e-32 141.4 269 37.5
Gorai.001G031300 Gossypium raimondii HOM05D003067 ORTHO05D009378 1.3e-31 141.0 274 35.8
Aqoxy7G03467 Aquilegia oxysepala HOM05D003067 ORTHO05D009378 1.7e-31 140.6 276 38.0
COL.COLO4_18774 Corchorus olitorius HOM05D003067 ORTHO05D009378 1.7e-31 140.6 268 36.9
GSVIVG01003733001 Vitis vinifera HOM05D003067 ORTHO05D009378 1.7e-31 140.6 280 36.8
Migut.J01329 Erythranthe guttata HOM05D003067 ORTHO05D009378 3.7e-31 139.4 249 35.7
MSTRG.6118 Avicennia marina HOM05D003067 ORTHO05D009378 8.2e-31 138.3 279 33.0
Gohir.A07G026200 Gossypium hirsutum HOM05D003067 ORTHO05D009378 8.2e-31 138.3 269 37.2
Eucgr.C00366 Eucalyptus grandis HOM05D003067 ORTHO05D009378 2.0e-29 133.7 276 37.0
AL7G21080 Arabidopsis lyrata HOM05D003067 ORTHO05D009378 2.9e-28 129.8 266 34.2
SGA_v2.0_scaffold265G46124 Striga asiatica HOM05D003067 ORTHO05D009378 2.9e-28 129.8 248 34.7
Carub.0007s0954 Capsella rubella HOM05D003067 ORTHO05D009378 1.9e-27 127.1 266 34.2
Lj6g0006451 Lotus japonicus HOM05D003067 ORTHO05D009378 1.9e-27 127.1 238 34.5
Sopen12g005120 Solanum pennellii HOM05D003067 ORTHO05D009378 2.5e-27 126.7 226 38.1
CsaV3_2G003640 Cucumis sativus L. HOM05D003067 ORTHO05D009378 3.2e-27 126.3 268 34.3
Medtr2g450220 Medicago truncatula HOM05D003067 ORTHO05D009378 4.2e-27 125.9 276 30.8
Solyc12g010230.2 Solanum lycopersicum HOM05D003067 ORTHO05D009378 4.2e-27 125.9 233 37.8
ClCG02G017140 Citrullus lanatus HOM05D003067 ORTHO05D009378 5.5e-27 125.6 257 35.8
Thhalv10025917m.g Eutrema salsugineum HOM05D003067 ORTHO05D009378 9.4e-27 124.8 265 33.2
SalBow1G0452 Salvia bowleyana HOM05D003067 ORTHO05D009378 1.2e-26 124.4 235 34.5
MELO3C004431.2 Cucumis melo HOM05D003067 ORTHO05D009378 4.7e-26 122.5 269 33.8
MBI14_g05269_MAGBIO Magnolia biondii HOM05D003067 ORTHO05D009378 2.3e-25 120.2 279 31.2
Sp7g28870 Schrenkiella parvula HOM05D003067 ORTHO05D009378 1.2e-24 117.9 264 33.3
Oeu043497.1 Olea europaea HOM05D003067 ORTHO05D009378 2.0e-24 117.1 98 59.2
A01p07190 Brassica napus HOM05D003067 ORTHO05D009378 4.4e-24 115.9 266 33.8
Oeu043496.1 Olea europaea HOM05D003067 ORTHO05D009378 5.7e-24 115.5 98 58.2
PGR142G2789 Punica granatum HOM05D003067 ORTHO05D009378 7.5e-24 115.2 234 35.5
Sabra18G0093300 Salix brachista HOM05D003067 ORTHO05D009378 7.5e-24 115.2 348 29.9
FAN23G1864 Fragaria x ananassa HOM05D003779 ORTHO05D002678 1.8e-22 110.5 189 37.0
C01p07950 Brassica napus HOM05D003067 ORTHO05D009378 2.4e-22 110.2 266 32.7
BolC1t00782H Brassica oleracea HOM05D003067 ORTHO05D009378 2.4e-22 110.2 266 32.7
BraA01t00670Z Brassica rapa HOM05D003067 ORTHO05D009378 3.1e-22 109.8 266 33.1
MD02G1010000 Malus domestica HOM05D003067 ORTHO05D009378 3.1e-22 109.8 98 57.1
HPP92_017493 Vanilla planifolia HOM05D003067 ORTHO05D009378 3.1e-22 109.8 258 34.5
BcaC09g51887 Brassica carinata HOM05D003067 ORTHO05D009378 5.3e-22 109.0 266 32.3
BcaNung03423 Brassica carinata HOM05D003067 ORTHO05D009378 4.5e-21 105.9 266 32.0
AT4G30993 Arabidopsis thaliana HOM05D003067 ORTHO05D009378 1.7e-20 104.0 209 32.5
CDE06G1077 Ceratophyllum demersum HOM05D003067 ORTHO05D009378 5.5e-19 99.0 279 29.0
FAN19G0469 Fragaria x ananassa HOM05D003067 ORTHO05D009378 9.4e-19 98.2 96 54.2
THA.LOC104803568 Tarenaya hassleriana HOM05D003067 ORTHO05D009378 2.7e-18 96.7 278 28.1
CARHR238890 Cardamine hirsuta HOM05D003067 ORTHO05D009378 4.7e-18 95.9 94 45.7
ATR1153G020 Amborella trichopoda HOM05D003067 ORTHO05D009378 8.8e-17 91.7 264 27.7
Zm00001eb374750 Zea mays HOM05D003067 ORTHO05D009378 1.2e-16 91.3 274 29.6
Cpa.g.sc46.125 Carica papaya HOM05D003067 ORTHO05D009378 1.7e-15 87.4 94 46.8
Os06g0183700 Oryza sativa ssp. japonica HOM05D003067 ORTHO05D009378 2.8e-15 86.7 267 27.7
GSVIVG01003739001 Vitis vinifera HOM05D003067 ORTHO05D009378 2.8e-15 86.7 102 47.1
PGSC0003DMG400007894 Solanum tuberosum HOM05D003067 ORTHO05D009378 3.7e-15 86.3 172 38.4
Nitab4.5_0001478g0160 Nicotiana tabacum HOM05D003067 ORTHO05D009378 9.1e-14 81.6 157 35.0
CSS0014498 Camellia sinensis var. sinensis HOM05D003067 ORTHO05D009378 3.5e-13 79.7 101 40.6
Manes.14G112000 Manihot esculenta HOM05D003067 ORTHO05D009378 1.3e-12 77.8 204 29.9
DCAR_014819 Daucus carota HOM05D003067 ORTHO05D009378 1.7e-12 77.4 231 28.1
MD02G1010100 Malus domestica HOM05D003067 ORTHO05D009378 6.1e-10 68.9 103 35.9
SGA_v2.0_scaffold214G42289 Striga asiatica HOM05D003067 ORTHO05D009378 6.8e-09 65.5 95 37.9
Duzib150G0133 Durio zibethinus HOM05D003067 ORTHO05D009378 7.5e-08 62.0 205 26.8


User provided reference genes

Program Settings