Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro06082 Vaccinium macrocarpon HOM05D005968 ORTHO05D007158 7.3e-109 397.1 185 100.0
Dinv41378 Davidia involucrata HOM05D005968 ORTHO05D007158 2.6e-82 308.9 185 79.5
CSS0021374 Camellia sinensis var. sinensis HOM05D005968 ORTHO05D007158 4.4e-82 308.1 185 79.5
Actinidia38673 Actinidia chinensis HOM05D005968 ORTHO05D007158 4.9e-81 304.7 185 79.5
Cfa020826 Carpinus fangiana HOM05D002374 ORTHO05D003594 8.4e-81 303.9 185 77.8
Glyma.17G073700 Glycine max HOM05D005968 ORTHO05D007158 1.4e-80 303.1 185 77.8
Oeu038140.1 Olea europaea HOM05D005968 ORTHO05D007158 1.4e-80 303.1 182 79.1
Thecc.09G030600 Theobroma cacao HOM05D005968 ORTHO05D007158 1.4e-80 303.1 181 79.6
GSVIVG01023606001 Vitis vinifera HOM05D005968 ORTHO05D007158 1.9e-80 302.8 185 77.3
CiPaw.15G168400 Carya illinoinensis HOM05D005968 ORTHO05D007158 3.2e-80 302.0 185 76.8
SalBow1G6433 Salvia bowleyana HOM05D005968 ORTHO05D007158 3.2e-80 302.0 185 78.9
Gohir.D08G273400 Gossypium hirsutum HOM05D005968 ORTHO05D007158 4.2e-80 301.6 182 78.0
Gorai.004G291800 Gossypium raimondii HOM05D005968 ORTHO05D007158 4.2e-80 301.6 182 78.0
arahy.Tifrunner.gnm1.ann1.D6JQQQ Arachis hypogaea HOM05D005968 ORTHO05D007158 5.4e-80 301.2 185 77.3
Lj7A459G65 Lonicera japonica HOM05D005968 ORTHO05D007158 7.1e-80 300.8 182 79.1
Hma1.2p1_0222F.1_g093590 Hydrangea macrophylla HOM05D005968 ORTHO05D007158 1.2e-79 300.1 185 77.3
Lalb_Chr12g0198711 Lupinus albus HOM05D005968 ORTHO05D007158 1.2e-79 300.1 185 76.8
CANSAT11G2689 Cannabis sativa HOM05D005968 ORTHO05D007158 1.6e-79 299.7 185 76.2
Duzib187G1838 Durio zibethinus HOM05D005968 ORTHO05D007158 1.6e-79 299.7 187 77.5
Glyma.02G204100 Glycine max HOM05D005968 ORTHO05D007158 2.1e-79 299.3 185 76.8
Nn8g39893 Nelumbo nucifera HOM05D005968 ORTHO05D007158 2.1e-79 299.3 182 76.4
Ca_21128_v3 Cicer arietinum L. HOM05D005968 ORTHO05D007158 2.7e-79 298.9 185 77.3
Prupe.7G263000 Prunus persica HOM05D005968 ORTHO05D007158 2.7e-79 298.9 182 76.4
MD15G1144700 Malus domestica HOM05D005968 ORTHO05D007158 3.5e-79 298.5 185 76.8
Dinv42854 Davidia involucrata HOM05D005968 ORTHO05D007158 4.6e-79 298.1 181 77.9
Atru.chr7.47_Atru.chr7.48 Acer truncatum HOM05D005968 ORTHO05D007158 7.8e-79 297.4 180 78.3
Aqoxy2G01962_Aqoxy2G01963 Aquilegia oxysepala HOM05D005968 ORTHO05D007158 1.0e-78 297.0 182 76.4
Gohir.A08G251800 Gossypium hirsutum HOM05D005968 ORTHO05D007158 1.0e-78 297.0 187 77.5
HanXRQChr09g0245781 Helianthus annuus HOM05D005968 ORTHO05D007158 1.3e-78 296.6 180 77.2
Lj4g0027447 Lotus japonicus HOM05D005968 ORTHO05D007158 1.3e-78 296.6 185 75.7
TAR626G1902 Trochodendron aralioides HOM05D005968 ORTHO05D007158 1.3e-78 296.6 185 75.7
MD02G1007400 Malus domestica HOM05D005968 ORTHO05D007158 1.7e-78 296.2 185 76.8
Manes.14G143600 Manihot esculenta HOM05D005968 ORTHO05D007158 1.7e-78 296.2 186 76.9
ECA236G4418 Erigeron canadensis HOM05D005968 ORTHO05D007158 2.3e-78 295.8 179 77.1
Lsat_1_v5_gn_8_63401 Lactuca sativa HOM05D005968 ORTHO05D007158 3.0e-78 295.4 179 77.7
Cc06_g14950 Coffea canephora HOM05D005968 ORTHO05D007158 3.9e-78 295.0 185 77.3
SGA_v2.0_scaffold347G49545 Striga asiatica HOM05D005968 ORTHO05D007158 3.9e-78 295.0 182 77.5
TPR.G24830 Trifolium pratense HOM05D005968 ORTHO05D007158 3.9e-78 295.0 185 75.7
VMungo1215G2113 Vigna mungo HOM05D005968 ORTHO05D007158 3.9e-78 295.0 182 76.4
Cpa.g.sc46.157 Carica papaya HOM05D005968 ORTHO05D007158 6.6e-78 294.3 180 76.1
RcHm_v2.0_Chr2g0085611 Rosa chinensis HOM05D005968 ORTHO05D007158 6.6e-78 294.3 185 73.5
QL02p093270 Quercus lobata HOM05D005968 ORTHO05D007158 8.7e-78 293.9 182 75.3
MSTRG.26272 Avicennia marina HOM05D005968 ORTHO05D007158 1.5e-77 293.1 182 77.5
CiPaw.16G111000 Carya illinoinensis HOM05D005968 ORTHO05D007158 1.5e-77 293.1 185 75.1
EL10Ac8g18668 Beta vulgaris HOM05D005968 ORTHO05D007158 1.9e-77 292.7 185 76.2
Nn2g12378 Nelumbo nucifera HOM05D005968 ORTHO05D007158 1.9e-77 292.7 185 75.1
CAN.G160.61 Capsicum annuum HOM05D005968 ORTHO05D007158 3.3e-77 292.0 185 75.7
Eucgr.C02493 Eucalyptus grandis HOM05D005968 ORTHO05D007158 3.3e-77 292.0 185 73.0
Eucgr.C02540 Eucalyptus grandis HOM05D005968 ORTHO05D007158 3.3e-77 292.0 185 73.0
Sabra06G0140100 Salix brachista HOM05D005968 ORTHO05D007158 4.3e-77 291.6 187 75.9
Potri.006G184300 Populus trichocarpa HOM05D005968 ORTHO05D007158 5.6e-77 291.2 185 76.2
Phvul.003G156000 Phaseolus vulgaris HOM05D005968 ORTHO05D007158 7.3e-77 290.8 185 74.6
AUR62006466 Chenopodium quinoa HOM05D005968 ORTHO05D007158 9.6e-77 290.4 185 75.1
AUR62029822 Chenopodium quinoa HOM05D005968 ORTHO05D007158 1.6e-76 289.7 185 75.1
Migut.K00326 Erythranthe guttata HOM05D005968 ORTHO05D007158 1.6e-76 289.7 182 76.4
DCAR_019393 Daucus carota HOM05D005968 ORTHO05D007158 2.1e-76 289.3 185 73.5
FAN26G1763 Fragaria x ananassa HOM05D005968 ORTHO05D007158 2.1e-76 289.3 185 73.0
Ciclev10008980m.g Citrus clementina HOM05D005968 ORTHO05D007158 2.8e-76 288.9 180 76.1
FAN23G3092 Fragaria x ananassa HOM05D005968 ORTHO05D007158 3.6e-76 288.5 185 72.4
Medtr4g130830 Medicago truncatula HOM05D005968 ORTHO05D007158 6.2e-76 287.7 185 74.6
Nitab4.5_0009876g0020 Nicotiana tabacum HOM05D005968 ORTHO05D007158 6.2e-76 287.7 177 78.0
COL.COLO4_18810 Corchorus olitorius HOM05D000238 ORTHO05D007158 8.1e-76 287.3 174 78.2
FvH4_1g00920 Fragaria vesca HOM05D005968 ORTHO05D007158 8.1e-76 287.3 185 72.4
FAN28G0447 Fragaria x ananassa HOM05D005968 ORTHO05D007158 8.1e-76 287.3 185 72.4
Peaxi162Scf00401g00718 Petunia axillaris HOM05D005968 ORTHO05D007158 1.1e-75 287.0 177 78.0
Sc17g0006690 Simmondsia chinensis HOM05D005968 ORTHO05D007158 2.4e-75 285.8 178 77.0
PGSC0003DMG400011184 Solanum tuberosum HOM05D005968 ORTHO05D007158 3.1e-75 285.4 182 74.2
THA.LOC104803560 Tarenaya hassleriana HOM05D005968 ORTHO05D007158 3.1e-75 285.4 178 73.6
TWI34G0179 Tripterygium wilfordii HOM05D005968 ORTHO05D007158 4.0e-75 285.0 180 74.4
Zm00001eb086780 Zea mays HOM05D005968 ORTHO05D007158 9.0e-75 283.9 180 73.3
PSO111G0029 Papaver somniferum HOM05D005968 ORTHO05D007158 1.5e-74 283.1 179 75.4
PSO561G0082 Papaver somniferum HOM05D005968 ORTHO05D007158 1.5e-74 283.1 179 75.4
Sopen07g001720 Solanum pennellii HOM05D005968 ORTHO05D007158 1.5e-74 283.1 184 73.9
Potri.018G106700 Populus trichocarpa HOM05D005968 ORTHO05D007158 2.0e-74 282.7 179 73.7
unitig_52.g17565 Utricularia gibba HOM05D005968 ORTHO05D007158 2.0e-74 282.7 182 73.1
Sabra18G0090900 Salix brachista HOM05D005968 ORTHO05D007158 5.8e-74 281.2 179 73.7
CsaV3_1G028970 Cucumis sativus L. HOM05D005968 ORTHO05D007158 2.9e-73 278.9 182 72.0
Psat0s2403g0360 Pisum sativum HOM05D005968 ORTHO05D007158 2.9e-73 278.9 173 76.9
Zm00001eb420110 Zea mays HOM05D005968 ORTHO05D007158 2.9e-73 278.9 180 72.2
CARHR238800 Cardamine hirsuta HOM05D005968 ORTHO05D007158 3.8e-73 278.5 178 71.9
ATR0739G020 Amborella trichopoda HOM05D005968 ORTHO05D007158 4.9e-73 278.1 177 74.6
BcaNung03430 Brassica carinata HOM05D005968 ORTHO05D007158 4.9e-73 278.1 178 71.9
Carub.0007s0964 Capsella rubella HOM05D005968 ORTHO05D007158 4.9e-73 278.1 191 69.1
DCAR_017911 Daucus carota HOM05D005968 ORTHO05D007158 6.4e-73 277.7 182 72.0
Sp7g28770 Schrenkiella parvula HOM05D005968 ORTHO05D007158 6.4e-73 277.7 178 73.0
AT4G30900 Arabidopsis thaliana HOM05D005968 ORTHO05D007158 8.4e-73 277.3 178 71.9
AL7G21190 Arabidopsis lyrata HOM05D005968 ORTHO05D007158 1.1e-72 276.9 178 71.3
Sed0018428 Sechium edule HOM05D005968 ORTHO05D007158 2.4e-72 275.8 182 70.9
Nitab4.5_0003623g0020 Nicotiana tabacum HOM05D005968 ORTHO05D007158 3.2e-72 275.4 173 76.3
SEGI_19747 Sequoiadendron giganteum HOM05D005968 ORTHO05D007158 3.2e-72 275.4 177 73.4
BcaC09g51877 Brassica carinata HOM05D005968 ORTHO05D007158 4.2e-72 275.0 178 71.9
A01p07280 Brassica napus HOM05D005968 ORTHO05D007158 4.2e-72 275.0 178 71.9
C01p08040 Brassica napus HOM05D005968 ORTHO05D007158 4.2e-72 275.0 178 71.9
BolC1t00793H Brassica oleracea HOM05D005968 ORTHO05D007158 4.2e-72 275.0 178 71.9
BraA01t00677Z Brassica rapa HOM05D005968 ORTHO05D007158 4.2e-72 275.0 178 71.9
Thhalv10025727m.g Eutrema salsugineum HOM05D005968 ORTHO05D007158 1.6e-71 273.1 177 71.8
Lsat_1_v5_gn_4_18721 Lactuca sativa HOM05D005968 ORTHO05D007158 2.7e-71 272.3 179 71.5
Lsat_1_v5_gn_7_66900 Lactuca sativa HOM05D005968 ORTHO05D007158 3.6e-68 261.9 179 69.8
Haze_19205 Corylus avellana HOM05D005968 ORTHO05D007158 2.1e-63 246.1 157 73.9
RhsimUnG0158300 Rhododendron simsii HOM05D005968 ORTHO05D001263 4.9e-57 224.9 107 94.4
TAR636G1721 Trochodendron aralioides HOM05D005968 ORTHO05D007158 1.8e-54 216.5 110 88.2
PGR102G1528 Punica granatum HOM05D005968 ORTHO05D007158 3.7e-52 208.8 137 72.3
Mapoly0088s0077 Marchantia polymorpha HOM05D005968 ORTHO05D007158 1.3e-49 200.3 177 53.1
HPP92_004697 Vanilla planifolia HOM05D005968 ORTHO05D007158 2.9e-49 199.1 101 85.1
AagrBONN_evm.TU.Sc2ySwM_362.192 Anthoceros agrestis HOM05D005968 ORTHO05D007158 1.1e-27 127.5 136 44.9
arahy.Tifrunner.gnm1.ann1.4WLG0J Arachis hypogaea HOM05D005968 ORTHO05D007158 3.5e-26 122.5 154 46.8
arahy.Tifrunner.gnm1.ann1.HW7BNQ Arachis hypogaea HOM05D005968 ORTHO05D007158 7.5e-21 104.8 86 62.8
Nitab4.5_0006121g0010 Nicotiana tabacum HOM05D005968 ORTHO05D007158 9.1e-19 97.8 83 62.7
SHI23672 Sapria himalayana HOM05D005968 ORTHO05D007158 9.1e-19 97.8 66 71.2
CiPaw.15G168700 Carya illinoinensis HOM05D005968 ORTHO05D007158 5.2e-14 82.0 48 77.1


User provided reference genes

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