Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro06070 Vaccinium macrocarpon HOM05D003560 ORTHO05D004500 4.0e-154 548.1 288 100.0
vmacro06053 Vaccinium macrocarpon HOM05D003560 ORTHO05D004500 2.6e-105 386.0 312 71.2
Rhsim03G0259200 Rhododendron simsii HOM05D003560 ORTHO05D004500 2.4e-95 352.8 318 65.7
Dinv41343 Davidia involucrata HOM05D003560 ORTHO05D004500 1.7e-88 330.1 292 65.8
Dinv42820 Davidia involucrata HOM05D003560 ORTHO05D004500 4.1e-82 308.9 328 57.9
Dinv43280 Davidia involucrata HOM05D003560 ORTHO05D004500 4.1e-82 308.9 328 57.9
DCAR_009892 Daucus carota HOM05D003560 ORTHO05D004500 4.2e-79 298.9 304 59.2
CSS0046771 Camellia sinensis var. sinensis HOM05D003560 ORTHO05D004500 1.0e-77 294.3 320 57.2
Actinidia20936 Actinidia chinensis HOM05D003560 ORTHO05D004500 1.3e-77 293.9 317 57.4
Manes.06G031700 Manihot esculenta HOM05D003560 ORTHO05D004500 1.1e-76 290.8 318 55.3
MD04G1049500 Malus domestica HOM05D003560 ORTHO05D004500 2.5e-76 289.7 342 51.2
vmacro13051 Vaccinium macrocarpon HOM05D003560 ORTHO05D004500 3.3e-76 289.3 320 55.3
Hma1.2p1_1084F.1_g255280 Hydrangea macrophylla HOM05D003560 ORTHO05D004500 1.6e-75 287.0 312 56.7
Prupe.1G102400 Prunus persica HOM05D003560 ORTHO05D004500 1.1e-74 284.3 342 50.9
Rhsim01G0023800 Rhododendron simsii HOM05D003560 ORTHO05D004500 6.9e-74 281.6 321 55.5
RcHm_v2.0_Chr4g0405611 Rosa chinensis HOM05D003560 ORTHO05D004500 3.4e-73 279.3 341 49.6
TAR636G2626 Trochodendron aralioides HOM05D003560 ORTHO05D004500 1.0e-72 277.7 337 53.1
CANSAT11G0384 Cannabis sativa HOM05D003560 ORTHO05D004500 3.8e-72 275.8 329 51.1
Atru.chr7.14 Acer truncatum HOM05D003560 ORTHO05D004500 5.0e-72 275.4 327 53.2
MD13G1257100 Malus domestica HOM05D003560 ORTHO05D004500 1.1e-71 274.2 338 49.1
Haze_19142 Corylus avellana HOM05D003560 ORTHO05D004500 5.5e-71 271.9 342 49.4
MSTRG.19664 Avicennia marina HOM05D003560 ORTHO05D004500 1.6e-70 270.4 237 64.6
FAN22G1868 Fragaria x ananassa HOM05D003560 ORTHO05D004500 2.7e-70 269.6 321 50.8
CAN.G1190.4 Capsicum annuum HOM05D003560 ORTHO05D004500 3.6e-70 269.2 240 62.1
Nitab4.5_0001036g0120 Nicotiana tabacum HOM05D003560 ORTHO05D004500 3.6e-70 269.2 264 59.8
FAN07G0247 Fragaria x ananassa HOM05D003560 ORTHO05D004500 4.6e-70 268.9 321 50.5
FAN12G2950 Fragaria x ananassa HOM05D003560 ORTHO05D004500 4.6e-70 268.9 321 50.5
FAN12G4167 Fragaria x ananassa HOM05D003560 ORTHO05D004500 4.6e-70 268.9 321 50.5
Ciclev10007284m.g Citrus clementina HOM05D003560 ORTHO05D004500 7.9e-70 268.1 329 51.7
Nitab4.5_0006744g0010 Nicotiana tabacum HOM05D003560 ORTHO05D004500 7.9e-70 268.1 297 55.2
Potri.006G180800 Populus trichocarpa HOM05D003560 ORTHO05D004500 7.9e-70 268.1 302 54.3
Sabra06G0137800 Salix brachista HOM05D003560 ORTHO05D004500 7.9e-70 268.1 314 53.5
Potri.018G103000 Populus trichocarpa HOM05D003560 ORTHO05D004500 1.0e-69 267.7 318 53.5
FvH4_4g10150 Fragaria vesca HOM05D003560 ORTHO05D004500 3.0e-69 266.2 321 50.2
FAN17G2275 Fragaria x ananassa HOM05D003560 ORTHO05D004500 3.0e-69 266.2 321 50.2
TAR625G0571 Trochodendron aralioides HOM05D003560 ORTHO05D004500 5.1e-69 265.4 322 52.2
CARHR238630 Cardamine hirsuta HOM05D003560 ORTHO05D004500 6.7e-69 265.0 308 52.6
CiPaw.15G164500 Carya illinoinensis HOM05D003560 ORTHO05D004500 6.7e-69 265.0 322 51.2
Hma1.2p1_0222F.1_g093890 Hydrangea macrophylla HOM05D003560 ORTHO05D004500 6.7e-69 265.0 354 49.7
HanXRQChr10g0307611 Helianthus annuus HOM05D003560 ORTHO05D004500 8.8e-69 264.6 307 52.8
Sp7g28660 Schrenkiella parvula HOM05D003560 ORTHO05D004500 1.1e-68 264.2 311 52.1
Migut.J01389 Erythranthe guttata HOM05D003560 ORTHO05D004500 1.5e-68 263.8 238 62.2
Eucgr.C00241 Eucalyptus grandis HOM05D003560 ORTHO05D004500 1.5e-68 263.8 250 62.4
Thhalv10024256m.g Eutrema salsugineum HOM05D003560 ORTHO05D004500 1.5e-68 263.8 265 57.4
TWI32G0440 Tripterygium wilfordii HOM05D003560 ORTHO05D004500 1.5e-68 263.8 342 49.4
Duzib168G0378 Durio zibethinus HOM05D003560 ORTHO05D004500 4.4e-68 262.3 325 49.8
Aa31LG2G19610 Aethionema arabicum HOM05D003560 ORTHO05D004500 5.7e-68 261.9 250 59.6
HanXRQChr12g0357781 Helianthus annuus HOM05D003560 ORTHO05D004500 5.7e-68 261.9 268 56.7
SalBow1G5562 Salvia bowleyana HOM05D003560 ORTHO05D004500 7.4e-68 261.5 292 54.5
Cfa020786 Carpinus fangiana HOM05D003560 ORTHO05D004500 1.7e-67 260.4 331 48.9
Lj9A721G57 Lonicera japonica HOM05D003560 ORTHO05D004500 1.7e-67 260.4 268 58.2
GSVIVG01023682001 Vitis vinifera HOM05D003560 ORTHO05D004500 1.7e-67 260.4 273 58.2
AUR62025371 Chenopodium quinoa HOM05D003560 ORTHO05D004500 2.2e-67 260.0 233 63.5
PGSC0003DMG400011153 Solanum tuberosum HOM05D003560 ORTHO05D004500 2.8e-67 259.6 316 51.6
Thecc.09G153600 Theobroma cacao HOM05D003560 ORTHO05D004500 2.8e-67 259.6 324 50.0
Cc06_g14510 Coffea canephora HOM05D003560 ORTHO05D004500 3.7e-67 259.2 324 52.5
Gorai.009G009100 Gossypium raimondii HOM05D003560 ORTHO05D004500 3.7e-67 259.2 315 51.1
Aqoxy7G03346 Aquilegia oxysepala HOM05D003560 ORTHO05D004500 6.3e-67 258.5 284 56.7
BcaC01g01140 Brassica carinata HOM05D003560 ORTHO05D004500 6.3e-67 258.5 315 49.5
BolC3t21162H Brassica oleracea HOM05D003560 ORTHO05D004500 6.3e-67 258.5 315 49.5
Sopen07g002100 Solanum pennellii HOM05D003560 ORTHO05D004500 8.2e-67 258.1 327 50.8
Carub.0007s0981 Capsella rubella HOM05D003560 ORTHO05D004500 1.1e-66 257.7 234 61.5
PGR114G0002 Punica granatum HOM05D003560 ORTHO05D004500 1.1e-66 257.7 250 60.0
PGR142G1236 Punica granatum HOM05D003560 ORTHO05D004500 1.1e-66 257.7 250 60.0
Solyc07g005970.3 Solanum lycopersicum HOM05D003560 ORTHO05D004500 1.1e-66 257.7 237 61.2
BcaNung02741 Brassica carinata HOM05D003560 ORTHO05D004500 1.4e-66 257.3 308 51.3
BolC7t46280H Brassica oleracea HOM05D003560 ORTHO05D004500 1.4e-66 257.3 244 60.7
Gohir.A05G008100 Gossypium hirsutum HOM05D003560 ORTHO05D004500 1.4e-66 257.3 309 51.5
EL10Ac8g18909 Beta vulgaris HOM05D003560 ORTHO05D004500 1.8e-66 256.9 281 55.5
C03p88520 Brassica napus HOM05D003560 ORTHO05D004500 1.8e-66 256.9 315 49.2
A08p19080 Brassica napus HOM05D003560 ORTHO05D004500 2.4e-66 256.5 308 50.0
A03p60310 Brassica napus HOM05D003560 ORTHO05D004500 5.3e-66 255.4 321 49.5
C07p58220 Brassica napus HOM05D003560 ORTHO05D004500 6.9e-66 255.0 308 51.6
AUR62028380 Chenopodium quinoa HOM05D003560 ORTHO05D004500 6.9e-66 255.0 229 63.8
PSO782G3416 Papaver somniferum HOM05D003560 ORTHO05D004500 9.1e-66 254.6 252 58.7
CiPaw.16G106900 Carya illinoinensis HOM05D003560 ORTHO05D004500 1.2e-65 254.2 318 50.6
PSO063G7271 Papaver somniferum HOM05D003560 ORTHO05D004500 1.2e-65 254.2 268 56.3
AT4G30790 Arabidopsis thaliana HOM05D003560 ORTHO05D004500 1.5e-65 253.8 229 62.0
A01p07380 Brassica napus HOM05D003560 ORTHO05D004500 1.5e-65 253.8 250 57.6
BraA01t00687Z Brassica rapa HOM05D003560 ORTHO05D004500 1.5e-65 253.8 250 57.6
QL02p094176 Quercus lobata HOM05D003560 ORTHO05D004500 1.5e-65 253.8 332 49.1
Lsat_1_v5_gn_8_64740 Lactuca sativa HOM05D003560 ORTHO05D004500 2.0e-65 253.4 251 57.4
BraA03t15073Z Brassica rapa HOM05D003560 ORTHO05D004500 2.6e-65 253.1 320 49.4
Gohir.D05G008900 Gossypium hirsutum HOM05D003560 ORTHO05D004500 2.6e-65 253.1 315 50.5
Peaxi162Scf00563g00417 Petunia axillaris HOM05D003560 ORTHO05D004500 3.4e-65 252.7 338 49.1
BcaC09g51868 Brassica carinata HOM05D003560 ORTHO05D004500 5.9e-65 251.9 250 57.2
BolC1t00801H Brassica oleracea HOM05D003560 ORTHO05D004500 5.9e-65 251.9 250 57.2
BcaNung04829 Brassica carinata HOM05D003560 ORTHO05D004500 1.0e-64 251.1 308 49.7
BcaNung01560 Brassica carinata HOM05D003560 ORTHO05D004500 1.3e-64 250.8 257 56.4
Lalb_Chr13g0300691 Lupinus albus HOM05D003560 ORTHO05D004500 1.3e-64 250.8 257 57.6
Sed0017470 Sechium edule HOM05D003560 ORTHO05D004500 1.3e-64 250.8 234 62.0
AL7G21340 Arabidopsis lyrata HOM05D003560 ORTHO05D004500 1.7e-64 250.4 222 62.6
PGR102G2861 Punica granatum HOM05D003560 ORTHO05D004500 5.0e-64 248.8 249 58.2
C01p08140 Brassica napus HOM05D003560 ORTHO05D004500 6.5e-64 248.4 250 56.8
Lalb_Chr12g0198821 Lupinus albus HOM05D003560 ORTHO05D004500 6.5e-64 248.4 281 54.1
Hund08956 Selenicereus undatus HOM05D003560 ORTHO05D004500 6.5e-64 248.4 233 60.9
THA.LOC104803909 Tarenaya hassleriana HOM05D003560 ORTHO05D004500 6.5e-64 248.4 234 61.5
COL.COLO4_05033 Corchorus olitorius HOM05D003560 ORTHO05D004500 8.5e-64 248.1 346 46.8
Nn2g14025 Nelumbo nucifera HOM05D003560 ORTHO05D004500 1.1e-63 247.7 317 50.5
SGA_v2.0_scaffold265G46080 Striga asiatica HOM05D003560 ORTHO05D004500 1.1e-63 247.7 354 46.6
DCAR_020090 Daucus carota HOM05D003560 ORTHO05D004500 1.4e-63 247.3 306 50.3
THA.LOC104803549 Tarenaya hassleriana HOM05D003560 ORTHO05D004500 1.9e-63 246.9 264 55.7
Phvul.003G153800 Phaseolus vulgaris HOM05D003560 ORTHO05D004500 2.5e-63 246.5 285 54.0
Ah.09g228690 Amaranthus hybridus HOM05D003560 ORTHO05D004500 4.2e-63 245.7 277 53.1
Glyma.17G071400 Glycine max HOM05D003560 ORTHO05D004500 4.2e-63 245.7 292 53.8
Lj4g0007617 Lotus japonicus HOM05D003560 ORTHO05D004500 4.2e-63 245.7 267 54.7
THA.LOC104815517 Tarenaya hassleriana HOM05D003560 ORTHO05D004500 5.5e-63 245.4 250 58.0
Sed0019076 Sechium edule HOM05D003560 ORTHO05D004500 1.2e-62 244.2 316 50.3
Lsat_1_v5_gn_5_89080 Lactuca sativa HOM05D003560 ORTHO05D004500 1.6e-62 243.8 256 56.2
MELO3C004116.2 Cucumis melo HOM05D003560 ORTHO05D004500 2.7e-62 243.0 230 62.6
TWI34G0709 Tripterygium wilfordii HOM05D003560 ORTHO05D004500 3.6e-62 242.7 293 51.5
ClCG02G014310 Citrullus lanatus HOM05D003560 ORTHO05D004500 6.1e-62 241.9 315 50.8
unitig_37.g12751 Utricularia gibba HOM05D003560 ORTHO05D004500 6.1e-62 241.9 233 58.8
CsaV3_2G007690 Cucumis sativus L. HOM05D003560 ORTHO05D004500 7.9e-62 241.5 227 62.6
Glyma.02G206500 Glycine max HOM05D003560 ORTHO05D004500 7.9e-62 241.5 285 53.7
VMungo1215G0464 Vigna mungo HOM05D003560 ORTHO05D004500 1.8e-61 240.4 330 47.0
BraA08t33870Z Brassica rapa HOM05D003560 ORTHO05D004500 2.3e-61 240.0 340 45.3
Duzib187G1514 Durio zibethinus HOM05D003560 ORTHO05D004500 2.3e-61 240.0 325 48.0
ECA234G2881 Erigeron canadensis HOM05D003560 ORTHO05D004500 3.0e-61 239.6 303 51.5
Cpa.g.sc199.20 Carica papaya HOM05D003560 ORTHO05D004500 1.1e-60 237.7 298 50.0
Psat7g006640 Pisum sativum HOM05D003560 ORTHO05D004500 1.5e-60 237.3 265 54.0
Duzib150G1559 Durio zibethinus HOM05D003560 ORTHO05D004500 2.6e-60 236.5 324 46.6
Ca_21152_v3 Cicer arietinum L. HOM05D003560 ORTHO05D004500 3.3e-60 236.1 256 55.9
TPR.G24844 Trifolium pratense HOM05D003560 ORTHO05D004500 3.3e-60 236.1 251 56.2
SalBow1G1777 Salvia bowleyana HOM05D003560 ORTHO05D004500 4.4e-60 235.7 258 53.9
Sabra18G0088600 Salix brachista HOM05D003560 ORTHO05D004500 5.7e-60 235.3 286 53.5
ECA236G1776 Erigeron canadensis HOM05D003560 ORTHO05D004500 3.7e-59 232.6 262 51.9
HanXRQChr05g0141571 Helianthus annuus HOM05D003560 ORTHO05D004500 3.1e-58 229.6 251 52.2
Medtr4g130370 Medicago truncatula HOM05D003560 ORTHO05D004500 4.1e-58 229.2 256 55.1
arahy.Tifrunner.gnm1.ann1.752C0V Arachis hypogaea HOM05D003560 ORTHO05D004500 1.6e-57 227.3 250 55.2
SGA_v2.0_scaffold45G17008 Striga asiatica HOM05D003560 ORTHO05D004500 3.8e-56 222.6 238 56.3
CDE02G1528 Ceratophyllum demersum HOM05D003560 ORTHO05D004500 1.5e-55 220.7 253 53.0
ATR0749G018 Amborella trichopoda HOM05D003560 ORTHO05D004500 5.5e-55 218.8 260 51.9
Ah.14g084380 Amaranthus hybridus HOM05D003560 ORTHO05D004500 3.6e-54 216.1 217 57.1
Zm00001eb206680 Zea mays HOM05D003560 ORTHO05D004500 2.0e-52 210.3 252 50.0
Os02g0179800 Oryza sativa ssp. japonica HOM05D003560 ORTHO05D004500 4.4e-52 209.1 251 51.4
Zm00001eb233940 Zea mays HOM05D003560 ORTHO05D004500 1.1e-50 204.5 252 49.6
Oeu024893.2 Olea europaea HOM05D003560 ORTHO05D004500 4.5e-49 199.1 267 48.3
SEGI_31223 Sequoiadendron giganteum HOM05D003560 ORTHO05D004500 7.7e-49 198.4 294 44.6
SMO361G0185 Selaginella moellendorffii HOM05D003560 ORTHO05D004500 2.3e-45 186.8 229 49.8
SMO361G0456 Selaginella moellendorffii HOM05D003560 ORTHO05D004500 2.3e-45 186.8 229 49.8
SMO301G0012 Selaginella moellendorffii HOM05D003560 ORTHO05D004500 1.2e-44 184.5 289 42.2
Pp3c19_12090 Physcomitrium patens HOM05D003560 ORTHO05D004500 2.0e-41 173.7 238 45.0
AagrBONN_evm.TU.Sc2ySwM_344.4294 Anthoceros agrestis HOM05D003560 ORTHO05D004500 1.5e-39 167.5 267 41.9
Pp3c22_15890 Physcomitrium patens HOM05D003560 ORTHO05D004500 9.5e-39 164.9 234 44.4
Hma1.2p1_0222F.1_g093900 Hydrangea macrophylla HOM05D003560 ORTHO05D004500 4.4e-36 156.0 146 63.0
Mapoly0041s0089 Marchantia polymorpha HOM05D003560 ORTHO05D004500 9.8e-36 154.8 226 41.6
Sc14g0000980 Simmondsia chinensis HOM05D003560 ORTHO05D004500 9.2e-34 148.3 195 49.7
Nn8g40053 Nelumbo nucifera HOM05D003560 ORTHO05D004500 1.4e-29 134.4 182 49.5
CDE05G3326 Ceratophyllum demersum HOM05D003560 ORTHO05D004500 3.2e-26 123.2 212 43.4
Migut.K00302 Erythranthe guttata HOM05D003560 ORTHO05D004500 1.0e-24 118.2 201 41.3
RcHm_v2.0_Chr5g0033091 Rosa chinensis HOM05D003560 ORTHO05D004500 8.9e-21 105.1 75 74.7
Zm00001eb234440 Zea mays HOM05D003560 ORTHO05D004500 1.5e-20 104.4 144 45.1
HPP92_021904 Vanilla planifolia HOM05D003560 ORTHO05D004500 1.7e-19 100.9 102 54.9
GSVIVG01023678001 Vitis vinifera HOM05D003560 ORTHO05D004500 1.1e-18 98.2 74 67.6
Zm00001eb400070 Zea mays HOM05D003560 ORTHO05D004500 1.6e-17 94.4 75 64.0
Zm00001eb257740 Zea mays HOM05D003560 ORTHO05D004500 4.7e-14 82.8 134 41.8
Zm00001eb110220 Zea mays HOM05D003560 ORTHO05D004500 1.1e-13 81.6 135 40.7
CBR_g55388 Chara braunii HOM05D003560 ORTHO05D004500 1.8e-13 80.9 207 34.3
CBR_g38482 Chara braunii HOM05D003560 ORTHO05D004500 5.2e-13 79.3 257 33.5
BcaC01g01128 Brassica carinata HOM05D003560 ORTHO05D004500 1.5e-12 77.8 51 72.5
Actinidia24368 Actinidia chinensis HOM05D003560 ORTHO05D004500 9.8e-12 75.1 110 49.1


User provided reference genes

Program Settings