Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro06066 Vaccinium macrocarpon HOM05D003426 ORTHO05D003816 4.5e-133 478.0 257 100.0
Rhsim03G0257700 Rhododendron simsii HOM05D003426 ORTHO05D003816 1.9e-54 216.9 254 56.7
Actinidia23556 Actinidia chinensis HOM05D003426 ORTHO05D003816 1.9e-46 190.3 271 48.3
Actinidia38667 Actinidia chinensis HOM05D003426 ORTHO05D003816 5.6e-43 178.7 271 46.1
Dinv43256 Davidia involucrata HOM05D003426 ORTHO05D003816 1.6e-42 177.2 281 44.5
Rhsim01G0028100 Rhododendron simsii HOM05D003426 ORTHO05D003816 2.1e-37 160.2 267 45.7
Lj9C718T11 Lonicera japonica HOM05D003426 ORTHO05D003816 3.0e-36 156.4 291 38.8
Hma1.2p1_0028F.1_g017630 Hydrangea macrophylla HOM05D003426 ORTHO05D003816 2.0e-32 143.7 269 38.7
Cc06_g14810 Coffea canephora HOM05D003426 ORTHO05D003816 1.4e-30 137.5 303 35.6
Actinidia38316 Actinidia chinensis HOM05D003426 ORTHO05D003816 7.2e-30 135.2 265 38.9
Dinv42844 Davidia involucrata HOM05D003426 ORTHO05D003816 8.7e-28 128.3 175 45.7
TAR636G1172 Trochodendron aralioides HOM05D003426 ORTHO05D003816 1.6e-26 124.0 255 38.0
vmacro16795 Vaccinium macrocarpon HOM05D003426 ORTHO05D003816 2.8e-26 123.2 240 41.2
TAR626G1511 Trochodendron aralioides HOM05D003426 ORTHO05D003816 1.1e-25 121.3 239 39.7
Peaxi162Scf00401g00417 Petunia axillaris HOM05D003426 ORTHO05D003816 2.4e-25 120.2 265 37.7
Actinidia01424 Actinidia chinensis HOM05D003426 ORTHO05D003816 3.1e-25 119.8 182 45.6
MSTRG.26266 Avicennia marina HOM05D003426 ORTHO05D003816 3.1e-25 119.8 232 40.9
CAN.G160.49 Capsicum annuum HOM05D003426 ORTHO05D003816 5.3e-25 119.0 251 36.7
MSTRG.6152 Avicennia marina HOM05D003426 ORTHO05D003816 1.2e-24 117.9 225 40.9
Oeu026460.1 Olea europaea HOM05D003426 ORTHO05D003816 1.2e-24 117.9 233 39.9
CSS0027727 Camellia sinensis var. sinensis HOM05D003426 ORTHO05D003816 1.0e-23 114.8 184 43.5
Oeu021305.2 Olea europaea HOM05D003426 ORTHO05D003816 3.2e-22 109.8 209 41.6
Sopen07g001810 Solanum pennellii HOM05D003426 ORTHO05D003816 7.2e-22 108.6 283 35.0
PGSC0003DMG400011187 Solanum tuberosum HOM05D003426 ORTHO05D003816 1.5e-19 100.9 285 34.0
Solyc07g005700.3 Solanum lycopersicum HOM05D003426 ORTHO05D003816 2.0e-19 100.5 283 32.5
TAR625G0621 Trochodendron aralioides HOM05D003426 ORTHO05D003816 2.0e-19 100.5 223 38.1
CiPaw.15G166800 Carya illinoinensis HOM05D003426 ORTHO05D003816 5.7e-19 99.0 256 34.8
Eucgr.C00251 Eucalyptus grandis HOM05D003426 ORTHO05D003816 9.7e-19 98.2 232 35.8
Cfa020810 Carpinus fangiana HOM05D003426 ORTHO05D003816 1.3e-18 97.8 256 34.4
Nn8g39953 Nelumbo nucifera HOM05D003426 ORTHO05D003816 3.7e-18 96.3 286 31.5
Hma1.2p1_2680F.1_g326790 Hydrangea macrophylla HOM05D003426 ORTHO05D003816 5.3e-17 92.4 104 48.1
TWI34G0373 Tripterygium wilfordii HOM05D003426 ORTHO05D003816 6.9e-17 92.0 262 33.2
Nitab4.5_0001571g0080 Nicotiana tabacum HOM05D003426 ORTHO05D003816 2.6e-16 90.1 116 44.0
Potri.006G182601 Populus trichocarpa HOM05D003426 ORTHO05D003816 4.5e-16 89.4 258 32.9
Cpa.g.sc46.169 Carica papaya HOM05D003426 ORTHO05D003816 7.7e-16 88.6 217 34.6
MD15G1151400 Malus domestica HOM05D003426 ORTHO05D003816 7.7e-16 88.6 250 35.6
EL10Ac8g18943 Beta vulgaris HOM05D003426 ORTHO05D003816 1.3e-15 87.8 260 32.7
CSS0024837 Camellia sinensis var. sinensis HOM05D003426 ORTHO05D003816 6.5e-15 85.5 88 54.5
ECA236G2514 Erigeron canadensis HOM05D003426 ORTHO05D003816 1.1e-14 84.7 251 31.9
PGSC0003DMG400036381 Solanum tuberosum HOM05D003426 ORTHO05D003816 1.1e-14 84.7 214 33.2
Atru.chr7.23 Acer truncatum HOM05D003426 ORTHO05D003816 1.4e-14 84.3 252 33.7
AUR62025323 Chenopodium quinoa HOM05D003426 ORTHO05D003816 1.9e-14 84.0 245 33.1
AUR62028339 Chenopodium quinoa HOM05D003426 ORTHO05D003816 3.2e-14 83.2 232 33.2
Lsat_1_v5_gn_8_63641 Lactuca sativa HOM05D003426 ORTHO05D003816 1.2e-13 81.3 225 33.3
PSO561G0041 Papaver somniferum HOM05D003426 ORTHO05D003816 1.2e-13 81.3 221 35.3
Haze_19169 Corylus avellana HOM05D003426 ORTHO05D003816 1.6e-13 80.9 317 29.7
Nn2g12424 Nelumbo nucifera HOM05D003426 ORTHO05D003816 1.6e-13 80.9 229 33.6
Aqoxy7G03377 Aquilegia oxysepala HOM05D003426 ORTHO05D003816 2.1e-13 80.5 212 35.4
PSO210G1729 Papaver somniferum HOM05D003426 ORTHO05D003816 2.1e-13 80.5 205 33.2
PSO210G2240 Papaver somniferum HOM05D003426 ORTHO05D003816 2.1e-13 80.5 205 32.7
Manes.06G035400 Manihot esculenta HOM05D003426 ORTHO05D003816 2.7e-13 80.1 255 32.9
Nitab4.5_0005869g0080 Nicotiana tabacum HOM05D003426 ORTHO05D003816 4.7e-13 79.3 91 46.2
Manes.14G144800 Manihot esculenta HOM05D003426 ORTHO05D003816 1.0e-12 78.2 259 32.8
SalBow1G0569 Salvia bowleyana HOM05D003426 ORTHO05D003816 2.3e-12 77.0 214 35.5
CiPaw.16G108300 Carya illinoinensis HOM05D003426 ORTHO05D003816 3.0e-12 76.6 288 28.5
FAN26G0769 Fragaria x ananassa HOM05D003426 ORTHO05D003816 3.0e-12 76.6 211 31.8
FAN23G3106 Fragaria x ananassa HOM05D003426 ORTHO05D003816 3.9e-12 76.3 204 32.4
MD02G1006400 Malus domestica HOM05D003426 ORTHO05D003816 5.2e-12 75.9 206 34.0
Ca_21135_v3 Cicer arietinum L. HOM05D003426 ORTHO05D003816 1.1e-11 74.7 242 30.6
Ca_21137_v3 Cicer arietinum L. HOM05D003426 ORTHO05D003816 1.1e-11 74.7 242 30.6
PGSC0003DMG400040160 Solanum tuberosum HOM05D003426 ORTHO05D003816 1.5e-11 74.3 224 33.5
PSO111G0039 Papaver somniferum HOM05D003426 ORTHO05D003816 2.0e-11 73.9 217 33.2
Nitab4.5_0011705g0030 Nicotiana tabacum HOM05D003426 ORTHO05D003816 3.3e-11 73.2 75 54.7
QL02p093542 Quercus lobata HOM05D001418 ORTHO05D002038 5.7e-11 72.4 99 41.4
HanXRQChr05g0144001 Helianthus annuus HOM05D003426 ORTHO05D003816 7.4e-11 72.0 207 33.8
Medtr4g130690 Medicago truncatula HOM05D003426 ORTHO05D003816 7.4e-11 72.0 246 29.3
COL.COLO4_18823 Corchorus olitorius HOM05D003426 ORTHO05D003816 2.2e-10 70.5 239 29.3
Dinv08190 Davidia involucrata HOM05D003426 ORTHO05D003816 2.2e-10 70.5 210 35.2
Thecc.09G028500 Theobroma cacao HOM05D003426 ORTHO05D003816 2.8e-10 70.1 248 31.0
CiPaw.16G108200 Carya illinoinensis HOM05D003426 ORTHO05D003816 3.7e-10 69.7 256 28.1
Psat4g009920 Pisum sativum HOM05D003426 ORTHO05D003816 3.7e-10 69.7 186 34.4
Lj7P460T26 Lonicera japonica HOM05D003426 ORTHO05D003816 4.8e-10 69.3 84 47.6
Prupe.7G264500 Prunus persica HOM05D003426 ORTHO05D003816 6.3e-10 68.9 177 35.6
Migut.J01365 Erythranthe guttata HOM05D003426 ORTHO05D003816 1.1e-09 68.2 224 33.0
PGR142G3879 Punica granatum HOM05D003426 ORTHO05D003816 1.4e-09 67.8 200 33.5
Sabra06G0139100 Salix brachista HOM05D003426 ORTHO05D003816 1.4e-09 67.8 64 53.1
Glyma.17G072650 Glycine max HOM05D003426 ORTHO05D003816 2.4e-09 67.0 254 28.3
Sc14g0000930 Simmondsia chinensis HOM05D003426 ORTHO05D003816 2.4e-09 67.0 229 29.7
PGSC0003DMG400043134 Solanum tuberosum HOM05D003426 ORTHO05D003816 4.1e-09 66.2 119 37.0
Lalb_Chr13g0300811 Lupinus albus HOM05D003426 ORTHO05D003816 5.3e-09 65.9 294 27.6
Solyc10g048140.2 Solanum lycopersicum HOM05D003426 ORTHO05D003816 5.3e-09 65.9 81 46.9
PGSC0003DMG400040189 Solanum tuberosum HOM05D003426 ORTHO05D003816 1.2e-08 64.7 149 35.6
THA.LOC104803917 Tarenaya hassleriana HOM05D003426 ORTHO05D003816 1.2e-08 64.7 240 30.0
Ah.09g228830 Amaranthus hybridus HOM05D006517 ORTHO05D007886 1.6e-08 64.3 221 32.1
Phvul.010G050200 Phaseolus vulgaris HOM05D003426 ORTHO05D003816 1.6e-08 64.3 73 46.6
RcHm_v2.0_Chr2g0085511 Rosa chinensis HOM05D003426 ORTHO05D003816 1.6e-08 64.3 219 30.6
DCAR_019401 Daucus carota HOM05D003426 ORTHO05D003816 2.0e-08 63.9 90 41.1
Lj4g0000658 Lotus japonicus HOM05D003426 ORTHO05D003816 2.0e-08 63.9 246 28.5
Duzib168G0934 Durio zibethinus HOM05D003426 ORTHO05D003816 2.6e-08 63.5 263 28.1
FvH4_1g00800 Fragaria vesca HOM05D003426 ORTHO05D003816 2.6e-08 63.5 181 33.1
MD17G1259500 Malus domestica HOM05D003426 ORTHO05D003816 2.6e-08 63.5 208 33.2
MBI15_g18232_MAGBIO Magnolia biondii HOM05D003426 ORTHO05D003816 3.5e-08 63.2 201 31.3
Glyma.17G184200 Glycine max HOM05D003426 ORTHO05D003816 4.5e-08 62.8 66 48.5
Hund08921 Selenicereus undatus HOM05D003426 ORTHO05D003816 4.5e-08 62.8 276 30.1
Sopen10g019310 Solanum pennellii HOM05D003426 ORTHO05D003816 4.5e-08 62.8 120 36.7
FAN28G0527 Fragaria x ananassa HOM05D003426 ORTHO05D003816 5.9e-08 62.4 181 30.4
Actinidia10526 Actinidia chinensis HOM05D003426 ORTHO05D003816 7.7e-08 62.0 221 30.8
Glyma.17G072800 Glycine max HOM05D003426 ORTHO05D003816 1.0e-07 61.6 211 29.9
CSS0012807 Camellia sinensis var. sinensis HOM05D003426 ORTHO05D003816 1.3e-07 61.2 75 46.7
Glyma.17G073000 Glycine max HOM05D003426 ORTHO05D003816 1.3e-07 61.2 233 27.9
MBI14_g30955_MAGBIO Magnolia biondii HOM05D003426 ORTHO05D003816 1.3e-07 61.2 206 35.0
Psat4g009680 Pisum sativum HOM05D003426 ORTHO05D003816 1.7e-07 60.8 71 47.9
CANSAT11G1136 Cannabis sativa HOM05D003426 ORTHO05D003816 2.2e-07 60.5 180 30.0
Medtr4g129690 Medicago truncatula HOM05D003426 ORTHO05D003816 2.2e-07 60.5 238 26.1
Psat4g010040 Pisum sativum HOM05D003426 ORTHO05D003816 2.2e-07 60.5 73 45.2
SGA_v2.0_scaffold265G46098 Striga asiatica HOM05D003426 ORTHO05D003816 2.9e-07 60.1 183 32.8
Glyma.17G072900 Glycine max HOM05D003426 ORTHO05D003816 3.8e-07 59.7 207 29.0
Rhsim02G0212600 Rhododendron simsii HOM05D003426 ORTHO05D003816 3.8e-07 59.7 215 31.2
Gohir.A07G027500 Gossypium hirsutum HOM05D003426 ORTHO05D003816 6.5e-07 58.9 66 50.0
PGSC0003DMG400037110 Solanum tuberosum HOM05D003426 ORTHO05D003816 6.5e-07 58.9 86 43.0
PGSC0003DMG400038550 Solanum tuberosum HOM05D003426 ORTHO05D003816 6.5e-07 58.9 86 43.0
EL10Ac2g02492 Beta vulgaris HOM05D016866 ORTHO05D003816 8.5e-07 58.5 192 29.2
Gorai.001G032900 Gossypium raimondii HOM05D003426 ORTHO05D003816 8.5e-07 58.5 66 50.0
Sopen10g015150 Solanum pennellii HOM05D003426 ORTHO05D003816 8.5e-07 58.5 93 37.6
GSVIVG01016047001 Vitis vinifera HOM05D003426 ORTHO05D003816 1.1e-06 58.2 41 68.3
Haze_10696 Corylus avellana HOM05D000650 ORTHO05D007302 1.5e-06 57.8 71 46.5
Gohir.D07G031500 Gossypium hirsutum HOM05D003426 ORTHO05D003816 1.5e-06 57.8 66 50.0
HanXRQChr10g0313661 Helianthus annuus HOM05D003426 ORTHO05D003816 1.5e-06 57.8 107 33.6
Lsat_1_v5_gn_5_90301 Lactuca sativa HOM05D003426 ORTHO05D003816 1.9e-06 57.4 254 27.2
Dinv17422 Davidia involucrata HOM05D003426 ORTHO05D003816 5.5e-06 55.8 191 27.7
Glyma.02G205001 Glycine max HOM05D003426 ORTHO05D003816 5.5e-06 55.8 259 28.2
Medtr3g045840 Medicago truncatula HOM05D003426 ORTHO05D003816 5.5e-06 55.8 62 45.2
Phvul.003G155200 Phaseolus vulgaris HOM05D003426 ORTHO05D003816 5.5e-06 55.8 206 29.1
RcHm_v2.0_Chr6g0270191 Rosa chinensis HOM05D000650 ORTHO05D007302 5.5e-06 55.8 52 51.9
Hund02984 Selenicereus undatus HOM05D016866 ORTHO05D015160 5.5e-06 55.8 119 34.5
Psat6g228520 Pisum sativum HOM05D003426 ORTHO05D003816 7.2e-06 55.5 73 37.0
Cpa.g.sc20.26 Carica papaya HOM05D000650 ORTHO05D000735 9.4e-06 55.1 34 67.6
vmacro01873 Vaccinium macrocarpon HOM05D000650 ORTHO05D007302 9.4e-06 55.1 87 37.9
GSVIVG01023627001 Vitis vinifera HOM05D003426 ORTHO05D003816 9.4e-06 55.1 154 31.8
Zm00001eb388770 Zea mays HOM05D003426 ORTHO05D003816 9.4e-06 55.1 55 49.1


User provided reference genes

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