Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro06019 Vaccinium macrocarpon HOM05D006253 ORTHO05D007666 1.3e-55 219.5 113 100.0
Rhsim05G0084000 Rhododendron simsii HOM05D006253 ORTHO05D007666 1.5e-40 169.5 95 90.5
Rhsim03G0192100 Rhododendron simsii HOM05D006253 ORTHO05D007666 3.8e-36 154.8 95 85.3
Actinidia12952 Actinidia chinensis HOM05D006253 ORTHO05D007666 2.2e-31 139.0 95 76.8
TAR376G0695 Trochodendron aralioides HOM05D006253 ORTHO05D007666 4.1e-30 134.8 95 74.7
Duzib052G0633 Durio zibethinus HOM05D006253 ORTHO05D007666 7.0e-30 134.0 95 73.7
Thecc.02G100600 Theobroma cacao HOM05D006253 ORTHO05D007666 1.6e-29 132.9 95 72.6
GSVIVG01031749001 Vitis vinifera HOM05D006253 ORTHO05D007666 4.5e-29 131.3 95 73.7
CiPaw.05G006400 Carya illinoinensis HOM05D006253 ORTHO05D007666 7.8e-29 130.6 95 70.5
Nn5g30328 Nelumbo nucifera HOM05D006253 ORTHO05D007666 7.8e-29 130.6 95 74.7
Manes.01G064000 Manihot esculenta HOM05D006253 ORTHO05D007666 1.0e-28 130.2 95 71.6
Gohir.A01G006900 Gossypium hirsutum HOM05D006253 ORTHO05D007666 1.3e-28 129.8 95 71.6
Hma1.2p1_0370F.1_g137800 Hydrangea macrophylla HOM05D006253 ORTHO05D007666 1.7e-28 129.4 95 74.7
QL11p035967 Quercus lobata HOM05D006253 ORTHO05D007666 1.7e-28 129.4 94 71.3
Gohir.D01G007000 Gossypium hirsutum HOM05D006253 ORTHO05D007666 2.3e-28 129.0 95 71.6
Gorai.002G008000 Gossypium raimondii HOM05D006253 ORTHO05D007666 2.3e-28 129.0 95 71.6
arahy.Tifrunner.gnm1.ann1.1E2X9I Arachis hypogaea HOM05D006253 ORTHO05D007666 3.8e-28 128.3 95 69.5
TPR.G19494 Trifolium pratense HOM05D006253 ORTHO05D007666 6.6e-28 127.5 94 74.5
Sed0021593 Sechium edule HOM05D006253 ORTHO05D007666 8.6e-28 127.1 160 50.6
arahy.Tifrunner.gnm1.ann1.ETD7FQ Arachis hypogaea HOM05D006253 ORTHO05D007666 1.1e-27 126.7 95 68.4
arahy.Tifrunner.gnm1.ann1.5N1458 Arachis hypogaea HOM05D006253 ORTHO05D007666 1.5e-27 126.3 95 69.5
Psat5g098280 Pisum sativum HOM05D006253 ORTHO05D007666 1.5e-27 126.3 95 70.5
Potri.004G141400 Populus trichocarpa HOM05D006253 ORTHO05D007666 1.9e-27 125.9 95 68.4
TPR.G19178 Trifolium pratense HOM05D006253 ORTHO05D007666 1.9e-27 125.9 95 73.7
Lj6g0019810 Lotus japonicus HOM05D006253 ORTHO05D007666 2.5e-27 125.6 95 68.4
Eucgr.I01155 Eucalyptus grandis HOM05D006253 ORTHO05D007666 3.3e-27 125.2 95 71.6
Sabra04G0093200 Salix brachista HOM05D006253 ORTHO05D007666 5.6e-27 124.4 95 69.5
COL.COLO4_32658 Corchorus olitorius HOM05D006253 ORTHO05D007666 7.3e-27 124.0 95 69.5
Sc14g0002650 Simmondsia chinensis HOM05D006253 ORTHO05D007666 9.5e-27 123.6 95 70.5
RcHm_v2.0_Chr6g0257111 Rosa chinensis HOM05D006253 ORTHO05D007666 2.1e-26 122.5 97 72.2
Oeu010588.1 Olea europaea HOM05D006253 ORTHO05D007666 2.8e-26 122.1 95 67.4
Phvul.002G266500 Phaseolus vulgaris HOM05D006253 ORTHO05D007666 2.8e-26 122.1 95 67.4
Prupe.8G124200 Prunus persica HOM05D006253 ORTHO05D007666 2.8e-26 122.1 97 71.1
VMungo1080G0444 Vigna mungo HOM05D006253 ORTHO05D007666 2.8e-26 122.1 95 66.3
Lj5C209T13 Lonicera japonica HOM05D006253 ORTHO05D007666 3.6e-26 121.7 95 70.5
MD05G1080500 Malus domestica HOM05D006253 ORTHO05D007666 6.1e-26 120.9 96 70.8
arahy.Tifrunner.gnm1.ann1.AJN977 Arachis hypogaea HOM05D006253 ORTHO05D007666 8.0e-26 120.6 95 66.3
Medtr8g099835 Medicago truncatula HOM05D006253 ORTHO05D007666 8.0e-26 120.6 95 70.5
vmacro19500 Vaccinium macrocarpon HOM05D006253 ORTHO05D007666 8.0e-26 120.6 70 85.7
Ah.10g034240 Amaranthus hybridus HOM05D006253 ORTHO05D007666 1.4e-25 119.8 95 66.3
FvH4_2g06110 Fragaria vesca HOM05D006253 ORTHO05D007666 1.4e-25 119.8 97 69.1
FAN24G2487 Fragaria x ananassa HOM05D006253 ORTHO05D007666 1.4e-25 119.8 97 69.1
HanXRQChr16g0501301 Helianthus annuus HOM05D006253 ORTHO05D007666 1.4e-25 119.8 95 65.3
Ca_01013_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 1.8e-25 119.4 95 67.4
Ca_15796_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 1.8e-25 119.4 95 69.5
Ca_30406_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 1.8e-25 119.4 95 69.5
Cc02_g18770 Coffea canephora HOM05D006253 ORTHO05D007666 3.0e-25 118.6 95 66.3
Glyma.04G194000 Glycine max HOM05D006253 ORTHO05D007666 4.0e-25 118.2 95 67.4
Ciclev10029390m.g Citrus clementina HOM05D006253 ORTHO05D007666 6.8e-25 117.5 95 66.3
Lalb_Chr25g0286231 Lupinus albus HOM05D006253 ORTHO05D007666 6.8e-25 117.5 95 65.3
MBI02_g02992_MAGBIO Magnolia biondii HOM05D006253 ORTHO05D007666 6.8e-25 117.5 95 67.4
PGSC0003DMG400025894 Solanum tuberosum HOM05D006253 ORTHO05D007666 6.8e-25 117.5 95 66.3
CAN.G1041.15 Capsicum annuum HOM05D006253 ORTHO05D007666 8.9e-25 117.1 95 66.3
Sed0027718 Sechium edule HOM05D006253 ORTHO05D007666 8.9e-25 117.1 95 66.3
Solyc01g108260.4 Solanum lycopersicum HOM05D006253 ORTHO05D007666 8.9e-25 117.1 95 66.3
Sopen01g050480 Solanum pennellii HOM05D006253 ORTHO05D007666 8.9e-25 117.1 95 66.3
SalBow3G2580 Salvia bowleyana HOM05D006253 ORTHO05D007666 1.2e-24 116.7 101 62.4
PSO478G4849 Papaver somniferum HOM05D006253 ORTHO05D007666 1.5e-24 116.3 95 68.4
Phvul.005G182700 Phaseolus vulgaris HOM05D006253 ORTHO05D007666 1.5e-24 116.3 95 64.2
MSTRG.27724 Avicennia marina HOM05D006253 ORTHO05D007666 2.0e-24 115.9 95 64.2
FAN27G3246 Fragaria x ananassa HOM05D006253 ORTHO05D007666 2.6e-24 115.5 103 65.0
THA.LOC104807358 Tarenaya hassleriana HOM05D006253 ORTHO05D007666 2.6e-24 115.5 95 64.2
HanXRQChr10g0319791 Helianthus annuus HOM05D006253 ORTHO05D007666 4.4e-24 114.8 95 64.2
SGA_v2.0_scaffold22G09667 Striga asiatica HOM05D006253 ORTHO05D007666 5.7e-24 114.4 95 64.2
MELO3C019508.2 Cucumis melo HOM05D006253 ORTHO05D007666 9.8e-24 113.6 95 65.3
PGR142G1116 Punica granatum HOM05D006253 ORTHO05D007666 1.7e-23 112.8 95 63.2
DCAR_007862 Daucus carota HOM05D006253 ORTHO05D007666 2.2e-23 112.5 95 66.3
CANSAT25G0326 Cannabis sativa HOM05D006253 ORTHO05D007666 4.9e-23 111.3 95 65.3
TWI79G0152 Tripterygium wilfordii HOM05D006253 ORTHO05D007666 6.4e-23 110.9 95 62.1
CsaV3_3G018580 Cucumis sativus L. HOM05D006253 ORTHO05D007666 1.1e-22 110.2 95 63.2
Lsat_1_v5_gn_5_112681 Lactuca sativa HOM05D006253 ORTHO05D007666 1.1e-22 110.2 95 60.0
AT4G34412 Arabidopsis thaliana HOM05D006253 ORTHO05D007666 1.4e-22 109.8 95 63.2
Aa31LG2G16330 Aethionema arabicum HOM05D006253 ORTHO05D007666 1.8e-22 109.4 95 64.2
CARHR242350 Cardamine hirsuta HOM05D006253 ORTHO05D007666 1.8e-22 109.4 95 62.1
ECA234G4670 Erigeron canadensis HOM05D006253 ORTHO05D007666 1.8e-22 109.4 95 62.1
Sp7g32200 Schrenkiella parvula HOM05D006253 ORTHO05D007666 1.8e-22 109.4 95 63.2
EL10Ac5g11497 Beta vulgaris HOM05D006253 ORTHO05D007666 3.2e-22 108.6 95 60.0
PSO782G1871 Papaver somniferum HOM05D006253 ORTHO05D007666 3.2e-22 108.6 90 66.7
CANSAT35G0887 Cannabis sativa HOM05D006253 ORTHO05D007666 4.1e-22 108.2 95 64.2
Zm00001eb124670 Zea mays HOM05D006253 ORTHO05D007666 4.1e-22 108.2 95 62.1
Aqoxy5G01240 Aquilegia oxysepala HOM05D006253 ORTHO05D007666 7.0e-22 107.5 78 67.9
BcaNung06978 Brassica carinata HOM05D006253 ORTHO05D007666 7.0e-22 107.5 95 62.1
Carub.0007s0590 Capsella rubella HOM05D006253 ORTHO05D007666 7.0e-22 107.5 95 61.1
Thhalv10026394m.g Eutrema salsugineum HOM05D006253 ORTHO05D007666 7.0e-22 107.5 95 61.1
HPP92_001047 Vanilla planifolia HOM05D006253 ORTHO05D007666 9.2e-22 107.1 95 61.1
A01p04020 Brassica napus HOM05D006253 ORTHO05D007666 1.6e-21 106.3 95 62.1
AL7G16840 Arabidopsis lyrata HOM05D006253 ORTHO05D007666 5.9e-21 104.4 95 61.1
BraA03t15367Z Brassica rapa HOM05D006253 ORTHO05D007666 5.9e-21 104.4 95 61.1
C07p60590 Brassica napus HOM05D006253 ORTHO05D007666 1.3e-20 103.2 95 60.0
BolC7t46489H Brassica oleracea HOM05D003825 ORTHO05D004491 1.3e-20 103.2 95 60.0
Os01g0142200 Oryza sativa ssp. japonica HOM05D006253 ORTHO05D007666 3.0e-20 102.1 95 58.9
Hma1.2p1_0804F.1_g221060 Hydrangea macrophylla HOM05D006253 ORTHO05D007666 1.9e-19 99.4 80 70.0
Mapoly0083s0082 Marchantia polymorpha HOM05D006253 ORTHO05D007666 1.2e-18 96.7 95 55.8
AagrBONN_evm.TU.Sc2ySwM_344.4457 Anthoceros agrestis HOM05D006253 ORTHO05D007666 1.6e-18 96.3 95 52.6
CSS0003209 Camellia sinensis var. sinensis HOM05D006253 ORTHO05D007666 2.1e-18 95.9 56 83.9
Sabra09G0078100 Salix brachista HOM05D006253 ORTHO05D007666 4.7e-18 94.7 101 55.4
SMO351G0094 Selaginella moellendorffii HOM05D006253 ORTHO05D007666 3.1e-17 92.0 95 52.6
Hund00335 Selenicereus undatus HOM05D006253 ORTHO05D007666 5.2e-17 91.3 67 74.6
Atru.chr5.2705 Acer truncatum HOM05D006253 ORTHO05D007666 8.9e-17 90.5 71 69.0
Prupe.4G258000 Prunus persica HOM05D006253 ORTHO05D007666 3.4e-16 88.6 85 61.2
Prupe.6G016400 Prunus persica HOM05D006253 ORTHO05D007666 5.8e-16 87.8 91 57.1
Glyma.06G172100 Glycine max HOM05D006253 ORTHO05D007666 1.9e-14 82.8 57 70.2
Pp3c22_3990 Physcomitrium patens HOM05D006253 ORTHO05D007666 7.0e-14 80.9 95 46.3
CSS0033941 Camellia sinensis var. sinensis HOM05D006253 ORTHO05D007666 9.2e-14 80.5 95 53.7
Hma1.2p1_0674F.1_g201500 Hydrangea macrophylla HOM05D006253 ORTHO05D007666 9.2e-14 80.5 67 68.7
Medtr2g105210 Medicago truncatula HOM05D006253 ORTHO05D007666 2.0e-13 79.3 57 71.9
AUR62029937 Chenopodium quinoa HOM05D006253 ORTHO05D007666 4.6e-13 78.2 69 56.5
FAN15G3440 Fragaria x ananassa HOM05D006253 ORTHO05D007666 1.0e-12 77.0 146 40.4
CBR_g38557 Chara braunii HOM05D006253 ORTHO05D007666 5.0e-12 74.7 95 43.2
FAN20G2826 Fragaria x ananassa HOM05D006253 ORTHO05D007666 3.3e-11 72.0 95 47.4
Migut.N01188 Erythranthe guttata HOM05D006253 ORTHO05D007666 4.3e-11 71.6 68 61.8
CDE08G0295 Ceratophyllum demersum HOM05D006253 ORTHO05D007666 9.5e-11 70.5 59 61.0
C01p04340 Brassica napus HOM05D006253 ORTHO05D007666 2.3e-09 65.9 59 59.3
AUR62033746 Chenopodium quinoa HOM05D006253 ORTHO05D007666 7.5e-08 60.8 95 40.0
SEGI_00525 Sequoiadendron giganteum HOM05D006253 ORTHO05D007666 1.7e-07 59.7 67 50.7


User provided reference genes

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