Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro05877 Vaccinium macrocarpon HOM05D005478 ORTHO05D006426 1.1e-103 380.2 215 100.0
Rhsim10G0014600 Rhododendron simsii HOM05D005478 ORTHO05D006426 1.1e-55 220.7 215 69.3
Actinidia36124 Actinidia chinensis HOM05D005478 ORTHO05D006426 2.4e-39 166.4 233 45.9
Hma1.2p1_0818F.1_g223270 Hydrangea macrophylla HOM05D005478 ORTHO05D006426 7.3e-36 154.8 218 47.2
Actinidia18441 Actinidia chinensis HOM05D005478 ORTHO05D006426 1.2e-35 154.1 220 46.4
vmacro18294 Vaccinium macrocarpon HOM05D005478 ORTHO05D006426 4.0e-34 149.1 225 50.7
GSVIVG01032384001 Vitis vinifera HOM05D005478 ORTHO05D006426 2.2e-32 143.3 226 40.7
CSS0007505 Camellia sinensis var. sinensis HOM05D005478 ORTHO05D006426 2.4e-31 139.8 219 51.6
Ciclev10016916m.g Citrus clementina HOM05D005478 ORTHO05D006426 5.4e-31 138.7 210 47.1
QL02p074001 Quercus lobata HOM05D005478 ORTHO05D006426 1.6e-30 137.1 214 39.3
CiPaw.03G045600 Carya illinoinensis HOM05D005478 ORTHO05D006426 6.6e-29 131.7 221 38.5
Oeu033728.1 Olea europaea HOM05D005478 ORTHO05D006426 1.1e-28 131.0 216 44.0
TAR371G0105 Trochodendron aralioides HOM05D005478 ORTHO05D006426 2.5e-28 129.8 215 44.7
Actinidia05981 Actinidia chinensis HOM05D005478 ORTHO05D006426 3.3e-28 129.4 216 44.0
Atru.chr6.2431 Acer truncatum HOM05D005478 ORTHO05D006426 5.6e-28 128.6 207 47.3
Haze_14759 Corylus avellana HOM05D005478 ORTHO05D006426 5.6e-28 128.6 222 46.8
Prupe.3G293900 Prunus persica HOM05D005478 ORTHO05D006426 7.3e-28 128.3 218 37.2
Cpa.g.sc108.77 Carica papaya HOM05D005478 ORTHO05D006426 9.6e-28 127.9 216 39.4
COL.COLO4_30424 Corchorus olitorius HOM05D005478 ORTHO05D006426 1.2e-27 127.5 217 38.7
MELO3C026588.2 Cucumis melo HOM05D005478 ORTHO05D006426 2.8e-27 126.3 218 35.8
CiPaw.04G029700 Carya illinoinensis HOM05D005478 ORTHO05D006426 3.6e-27 125.9 217 39.2
ClCG10G013780 Citrullus lanatus HOM05D005478 ORTHO05D006426 3.6e-27 125.9 219 36.5
TWI36G1604 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 3.6e-27 125.9 215 41.9
Cfa007338 Carpinus fangiana HOM05D005478 ORTHO05D006426 4.7e-27 125.6 219 45.2
CsaV3_3G042880 Cucumis sativus L. HOM05D005478 ORTHO05D006426 6.2e-27 125.2 219 35.2
MSTRG.3284 Avicennia marina HOM05D005478 ORTHO05D006426 1.1e-26 124.4 216 39.8
MSTRG.15534 Avicennia marina HOM05D005478 ORTHO05D006426 3.1e-26 122.9 210 39.0
Thecc.06G091700 Theobroma cacao HOM05D005478 ORTHO05D006426 5.2e-26 122.1 214 38.3
Medtr6g004420 Medicago truncatula HOM05D005478 ORTHO05D006426 1.2e-25 120.9 217 39.2
TWI56G0849 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 1.5e-25 120.6 215 37.2
TAR629G3442 Trochodendron aralioides HOM05D005478 ORTHO05D006426 4.4e-25 119.0 209 45.0
Sp2g16690 Schrenkiella parvula HOM05D005478 ORTHO05D006426 5.8e-25 118.6 215 39.1
TWI12G0237 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 7.6e-25 118.2 213 38.0
VMungo0464G1533 Vigna mungo HOM05D005478 ORTHO05D006426 7.6e-25 118.2 211 39.3
PGR142G0633 Punica granatum HOM05D005478 ORTHO05D006426 1.3e-24 117.5 221 38.5
Duzib235G1061 Durio zibethinus HOM05D005478 ORTHO05D006426 1.7e-24 117.1 218 39.0
Lalb_Chr22g0360721 Lupinus albus HOM05D005478 ORTHO05D006426 1.7e-24 117.1 216 36.6
Carub.0005s0595 Capsella rubella HOM05D005478 ORTHO05D006426 2.2e-24 116.7 211 36.5
AT3G27520 Arabidopsis thaliana HOM05D005478 ORTHO05D006426 4.9e-24 115.5 219 37.4
CANSAT64G0255 Cannabis sativa HOM05D005478 ORTHO05D006426 8.4e-24 114.8 215 38.1
THA.LOC104825319 Tarenaya hassleriana HOM05D005478 ORTHO05D006426 1.1e-23 114.4 218 35.3
Duzib160G0719 Durio zibethinus HOM05D005478 ORTHO05D006426 1.9e-23 113.6 212 35.8
AL5G16940 Arabidopsis lyrata HOM05D005478 ORTHO05D006426 5.4e-23 112.1 215 36.7
DCAR_011260 Daucus carota HOM05D005478 ORTHO05D006426 9.3e-23 111.3 214 41.6
Glyma.19G002600 Glycine max HOM05D005478 ORTHO05D006426 9.3e-23 111.3 207 44.4
TPR.G31952 Trifolium pratense HOM05D005478 ORTHO05D006426 1.2e-22 110.9 213 35.2
CARHR148890 Cardamine hirsuta HOM05D005478 ORTHO05D006426 1.6e-22 110.5 216 33.8
Migut.K01412 Erythranthe guttata HOM05D005478 ORTHO05D006426 2.1e-22 110.2 205 42.0
Potri.001G343200 Populus trichocarpa HOM05D005478 ORTHO05D006426 2.1e-22 110.2 211 35.5
Glyma.05G002400 Glycine max HOM05D005478 ORTHO05D006426 2.7e-22 109.8 207 36.7
Sed0022021 Sechium edule HOM05D005478 ORTHO05D006426 2.7e-22 109.8 214 35.5
Oeu048609.1 Olea europaea HOM05D005478 ORTHO05D006426 6.0e-22 108.6 221 46.2
SGA_v2.0_scaffold47G17517 Striga asiatica HOM05D005478 ORTHO05D006426 7.8e-22 108.2 216 36.1
Ca_04142_v3 Cicer arietinum L. HOM05D005478 ORTHO05D006426 1.0e-21 107.8 211 41.2
Gohir.A09G082300 Gossypium hirsutum HOM05D005478 ORTHO05D006426 1.0e-21 107.8 207 44.9
unitig_88.g27693 Utricularia gibba HOM05D000631 ORTHO05D000524 1.0e-21 107.8 215 35.3
Duzib192G0894 Durio zibethinus HOM05D005478 ORTHO05D006426 1.3e-21 107.5 210 38.6
Gohir.D09G082100 Gossypium hirsutum HOM05D005478 ORTHO05D006426 1.3e-21 107.5 211 44.1
Gorai.006G097900 Gossypium raimondii HOM05D005478 ORTHO05D006426 1.7e-21 107.1 210 43.8
Lalb_Chr24g0403571 Lupinus albus HOM05D005478 ORTHO05D006426 1.7e-21 107.1 218 44.5
Hund15527 Selenicereus undatus HOM05D005478 ORTHO05D006426 1.7e-21 107.1 213 35.7
Sabra16G0222600 Salix brachista HOM05D005478 ORTHO05D006426 2.3e-21 106.7 211 35.1
A06p41110 Brassica napus HOM05D005478 ORTHO05D006426 3.0e-21 106.3 208 33.7
C07p36630 Brassica napus HOM05D005478 ORTHO05D006426 3.0e-21 106.3 210 33.8
BraA06t27034Z Brassica rapa HOM05D005478 ORTHO05D006426 3.0e-21 106.3 208 33.7
AUR62041940 Chenopodium quinoa HOM05D005478 ORTHO05D006426 5.1e-21 105.5 219 34.2
Lsat_1_v5_gn_0_18280 Lactuca sativa HOM05D005478 ORTHO05D006426 6.6e-21 105.1 214 35.5
Lj2g0025845 Lotus japonicus HOM05D005478 ORTHO05D006426 8.7e-21 104.8 211 44.1
FAN02G1690 Fragaria x ananassa HOM05D005478 ORTHO05D006426 1.5e-20 104.0 214 37.9
Aa31LG2G5140 Aethionema arabicum HOM05D005478 ORTHO05D006426 1.9e-20 103.6 213 33.8
MD09G1022900 Malus domestica HOM05D005478 ORTHO05D006426 1.9e-20 103.6 218 34.4
MD17G1022200 Malus domestica HOM05D005478 ORTHO05D006426 2.5e-20 103.2 217 37.3
AUR62028419 Chenopodium quinoa HOM05D005478 ORTHO05D006426 3.3e-20 102.8 231 32.0
FAN05G2721 Fragaria x ananassa HOM05D005478 ORTHO05D006426 3.3e-20 102.8 218 38.1
Phvul.004G004600 Phaseolus vulgaris HOM05D005478 ORTHO05D006426 3.3e-20 102.8 208 45.2
arahy.Tifrunner.gnm1.ann1.WAXE9D Arachis hypogaea HOM05D005478 ORTHO05D006426 4.3e-20 102.4 215 41.4
BolC7t44179H Brassica oleracea HOM05D005478 ORTHO05D006426 5.6e-20 102.1 210 33.3
BraA09t35982Z Brassica rapa HOM05D005478 ORTHO05D006426 5.6e-20 102.1 212 34.4
BcaC06g33809 Brassica carinata HOM05D005478 ORTHO05D006426 7.3e-20 101.7 210 33.3
Eucgr.I01730 Eucalyptus grandis HOM05D005478 ORTHO05D006426 7.3e-20 101.7 215 44.7
A09p03440 Brassica napus HOM05D005478 ORTHO05D006426 9.6e-20 101.3 212 35.4
SGA_v2.0_scaffold30G12408 Striga asiatica HOM05D005478 ORTHO05D006426 1.3e-19 100.9 213 45.1
BcaB04g19441 Brassica carinata HOM05D005478 ORTHO05D006426 1.6e-19 100.5 213 35.2
Sc07g0003180 Simmondsia chinensis HOM05D005478 ORTHO05D006426 1.6e-19 100.5 217 31.3
BcaC06g30982 Brassica carinata HOM05D005478 ORTHO05D006426 2.1e-19 100.1 212 34.0
Thhalv10004961m.g Eutrema salsugineum HOM05D005478 ORTHO05D006426 2.8e-19 99.8 212 34.9
arahy.Tifrunner.gnm1.ann1.47572L Arachis hypogaea HOM05D005478 ORTHO05D006426 3.6e-19 99.4 211 39.8
BcaC04g23900 Brassica carinata HOM05D005478 ORTHO05D006426 3.6e-19 99.4 212 35.4
C09p03650 Brassica napus HOM05D005478 ORTHO05D006426 3.6e-19 99.4 212 35.4
RcHm_v2.0_Chr2g0173291 Rosa chinensis HOM05D005478 ORTHO05D006426 8.1e-19 98.2 159 37.7
HPP92_006182 Vanilla planifolia HOM05D005478 ORTHO05D006426 1.4e-18 97.4 206 34.5
FvH4_6g51790 Fragaria vesca HOM05D005478 ORTHO05D006426 2.4e-18 96.7 219 38.8
FAN14G4849 Fragaria x ananassa HOM05D005478 ORTHO05D006426 2.4e-18 96.7 219 37.0
HanXRQChr07g0199031 Helianthus annuus HOM05D005478 ORTHO05D006426 2.4e-18 96.7 214 37.4
Lsat_1_v5_gn_2_91160 Lactuca sativa HOM05D005478 ORTHO05D006426 2.4e-18 96.7 213 40.8
ATR0824G160 Amborella trichopoda HOM05D005478 ORTHO05D006426 3.1e-18 96.3 214 31.3
BolC9t53284H Brassica oleracea HOM05D005478 ORTHO05D006426 3.1e-18 96.3 217 34.1
FAN09G1593 Fragaria x ananassa HOM05D005478 ORTHO05D006426 3.1e-18 96.3 219 37.0
Manes.17G111100 Manihot esculenta HOM05D005478 ORTHO05D006426 3.1e-18 96.3 212 35.4
PGSC0003DMG400012636 Solanum tuberosum HOM05D005478 ORTHO05D006426 3.1e-18 96.3 210 33.3
Thhalv10027961m.g Eutrema salsugineum HOM05D005478 ORTHO05D006426 9.0e-18 94.7 207 33.3
Nn3g16686 Nelumbo nucifera HOM05D005478 ORTHO05D006426 1.5e-17 94.0 211 45.0
PSO478G1356 Papaver somniferum HOM05D005478 ORTHO05D006426 2.0e-17 93.6 215 34.4
THA.LOC104825211 Tarenaya hassleriana HOM05D005478 ORTHO05D006426 3.4e-17 92.8 162 37.7
HanXRQChr14g0451171 Helianthus annuus HOM05D005478 ORTHO05D006426 5.8e-17 92.0 214 43.5
Psat1g053440 Pisum sativum HOM05D005478 ORTHO05D006426 1.3e-16 90.9 209 33.0
Sopen02g038220 Solanum pennellii HOM05D005478 ORTHO05D006426 1.3e-16 90.9 210 31.9
Solyc02g093450.3 Solanum lycopersicum HOM05D005478 ORTHO05D006426 2.2e-16 90.1 210 31.9
Dinv25725 Davidia involucrata HOM05D005478 ORTHO05D006426 8.4e-16 88.2 131 53.4
PSO063G0871 Papaver somniferum HOM05D005478 ORTHO05D006426 1.9e-15 87.0 210 30.0
ECA238G3024 Erigeron canadensis HOM05D005478 ORTHO05D006426 3.2e-15 86.3 210 38.1
MBI14_g36718_MAGBIO Magnolia biondii HOM05D005478 ORTHO05D006426 3.2e-15 86.3 207 41.1
PSO754G0087 Papaver somniferum HOM05D005478 ORTHO05D006426 3.2e-15 86.3 210 29.5
PSO017G4510 Papaver somniferum HOM05D005478 ORTHO05D006426 4.2e-15 85.9 214 33.6
Aqoxy5G03740 Aquilegia oxysepala HOM05D005478 ORTHO05D006426 4.6e-14 82.4 215 29.3
CDE09G0806 Ceratophyllum demersum HOM05D005478 ORTHO05D006426 1.0e-13 81.3 208 26.4
Peaxi162Scf00700g00430 Petunia axillaris HOM05D005478 ORTHO05D006426 1.3e-13 80.9 202 29.2
CDE02G4674 Ceratophyllum demersum HOM05D005478 ORTHO05D006426 1.8e-13 80.5 216 26.4
Lju41C43G9 Lonicera japonica HOM05D005478 ORTHO05D006426 1.5e-12 77.4 131 51.1
Ah.02g128220 Amaranthus hybridus HOM05D005478 ORTHO05D006426 9.6e-12 74.7 215 28.8
SEGI_00200 Sequoiadendron giganteum HOM05D005478 ORTHO05D006426 4.0e-10 69.3 199 27.6
Aqoxy1G02464 Aquilegia oxysepala HOM05D005478 ORTHO05D006426 9.0e-10 68.2 191 29.8
Dinv33426 Davidia involucrata HOM05D005478 ORTHO05D006426 9.0e-10 68.2 50 68.0
Oeu018990.1 Olea europaea HOM05D005478 ORTHO05D006426 2.0e-09 67.0 89 67.4
Cc07_g01510 Coffea canephora HOM05D005478 ORTHO05D006426 4.9e-08 62.4 56 53.6
Nitab4.5_0000326g0190 Nicotiana tabacum HOM05D006502 ORTHO05D007704 8.4e-08 61.6 50 56.0
Os02g0595300 Oryza sativa ssp. japonica HOM05D005478 ORTHO05D006426 1.4e-07 60.8 213 34.7
MBI10_g11211_MAGBIO Magnolia biondii HOM05D005478 ORTHO05D006426 3.2e-07 59.7 53 49.1
EL10Ac6g14100 Beta vulgaris HOM05D005478 ORTHO05D006426 5.5e-07 58.9 133 41.4
Gohir.D05G130900 Gossypium hirsutum HOM05D005478 ORTHO05D006426 7.1e-07 58.5 143 34.3


User provided reference genes

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