Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro05852 Vaccinium macrocarpon HOM05D008092 ORTHO05D010277 5.1e-145 517.7 256 100.0
Rhsim10G0018500 Rhododendron simsii HOM05D008092 ORTHO05D010277 4.4e-96 355.1 301 62.5
Actinidia06006 Actinidia chinensis HOM05D008092 ORTHO05D010277 8.6e-76 287.7 256 59.0
Dinv33463 Davidia involucrata HOM05D008092 ORTHO05D010277 1.8e-73 280.0 251 58.6
CSS0000484 Camellia sinensis var. sinensis HOM05D008092 ORTHO05D010277 4.9e-71 271.9 251 56.6
CSS0015151 Camellia sinensis var. sinensis HOM05D008092 ORTHO05D010277 5.4e-70 268.5 251 56.2
TAR374G1215 Trochodendron aralioides HOM05D008092 ORTHO05D010277 4.3e-59 232.3 232 53.0
GSVIVG01032429001 Vitis vinifera HOM05D008092 ORTHO05D010277 1.9e-54 216.9 240 50.0
CiPaw.03G041800 Carya illinoinensis HOM05D008092 ORTHO05D010277 4.2e-54 215.7 255 49.4
Cc00_g25440 Coffea canephora HOM05D008092 ORTHO05D010277 1.1e-51 207.6 217 47.5
CiPaw.02G035400 Carya illinoinensis HOM05D008092 ORTHO05D010277 9.6e-51 204.5 243 49.0
QL02p075225 Quercus lobata HOM05D008092 ORTHO05D010277 1.1e-49 201.1 233 48.1
QL93p1842_0091 Quercus lobata HOM05D008092 ORTHO05D010277 9.0e-49 198.0 233 48.5
Atru.chr6.2355 Acer truncatum HOM05D008092 ORTHO05D010277 7.6e-48 194.9 246 45.1
Lsat_1_v5_gn_4_183520 Lactuca sativa HOM05D008092 ORTHO05D010277 2.9e-47 193.0 239 43.1
Cfa007393 Carpinus fangiana HOM05D008092 ORTHO05D010277 1.4e-46 190.7 219 50.2
Manes.17G115000 Manihot esculenta HOM05D008092 ORTHO05D010277 1.6e-45 187.2 252 42.5
TWI36G1451 Tripterygium wilfordii HOM05D008092 ORTHO05D010277 2.1e-45 186.8 202 46.5
Duzib187G1326 Durio zibethinus HOM05D008092 ORTHO05D010277 6.0e-45 185.3 227 41.4
Nitab4.5_0000118g0190 Nicotiana tabacum HOM05D008092 ORTHO05D010277 2.3e-44 183.3 171 52.0
CANSAT64G0606 Cannabis sativa HOM05D008092 ORTHO05D010277 8.7e-44 181.4 255 40.4
Thecc.04G015000 Theobroma cacao HOM05D008092 ORTHO05D010277 1.1e-43 181.0 227 41.0
Gohir.A10G102700 Gossypium hirsutum HOM05D008092 ORTHO05D010277 1.9e-43 180.3 227 42.7
COL.COLO4_29084 Corchorus olitorius HOM05D008092 ORTHO05D010277 3.3e-43 179.5 235 41.7
CiPaw.04G027500 Carya illinoinensis HOM05D008092 ORTHO05D010277 5.6e-43 178.7 238 43.7
HanXRQChr09g0255051 Helianthus annuus HOM05D008092 ORTHO05D010277 5.6e-43 178.7 245 38.8
MBI10_g33304_MAGBIO Magnolia biondii HOM05D008092 ORTHO05D010277 1.6e-42 177.2 221 43.9
Gorai.011G095100 Gossypium raimondii HOM05D008092 ORTHO05D010277 2.8e-42 176.4 227 41.9
Gohir.D10G086900 Gossypium hirsutum HOM05D008092 ORTHO05D010277 1.1e-41 174.5 227 41.4
MBI10_g44380_MAGBIO Magnolia biondii HOM05D008092 ORTHO05D010277 2.3e-36 156.8 221 40.7
Cpa.g.sc108.51 Carica papaya HOM05D008092 ORTHO05D010277 3.0e-36 156.4 230 42.2
PGR083G2137 Punica granatum HOM05D008092 ORTHO05D010277 3.9e-36 156.0 229 40.6
MD17G1030500 Malus domestica HOM05D008092 ORTHO05D010277 1.5e-35 154.1 234 40.6
Prupe.3G289300 Prunus persica HOM05D008092 ORTHO05D010277 1.6e-34 150.6 237 41.8
Glyma.05G005000 Glycine max HOM05D008092 ORTHO05D010277 6.9e-33 145.2 186 45.2
CDE02G4384 Ceratophyllum demersum HOM05D008092 ORTHO05D010277 1.5e-32 144.1 218 39.4
Sc03g0007590 Simmondsia chinensis HOM05D008092 ORTHO05D010277 1.1e-30 137.9 217 36.9
arahy.Tifrunner.gnm1.ann1.M07V8F Arachis hypogaea HOM05D008092 ORTHO05D010277 4.2e-30 136.0 186 41.4
Phvul.004G010900 Phaseolus vulgaris HOM05D008092 ORTHO05D010277 4.2e-30 136.0 186 43.5
arahy.Tifrunner.gnm1.ann1.KZ8L38 Arachis hypogaea HOM05D008092 ORTHO05D010277 7.1e-30 135.2 179 43.0
DCAR_021714 Daucus carota HOM05D008092 ORTHO05D010277 7.1e-30 135.2 149 47.0
Glyma.19G005600 Glycine max HOM05D008092 ORTHO05D010277 1.6e-29 134.0 172 44.2
Lj2g0022146 Lotus japonicus HOM05D008092 ORTHO05D010277 2.1e-29 133.7 187 43.9
ECA232G1487 Erigeron canadensis HOM05D008092 ORTHO05D010277 3.9e-28 129.4 208 38.5
Psat1g056120 Pisum sativum HOM05D008092 ORTHO05D010277 3.3e-27 126.3 177 42.4
TPR.G14075 Trifolium pratense HOM05D008092 ORTHO05D010277 7.4e-27 125.2 179 43.0
Lalb_Chr02g0156941 Lupinus albus HOM05D008092 ORTHO05D010277 9.6e-27 124.8 185 40.5
VMungo0464G1885 Vigna mungo HOM05D008092 ORTHO05D010277 9.6e-27 124.8 186 42.5
HPP92_003083 Vanilla planifolia HOM05D008092 ORTHO05D010277 2.1e-26 123.6 169 38.5
CsaV3_3G042670 Cucumis sativus L. HOM05D008092 ORTHO05D010277 2.8e-26 123.2 212 35.4
Nitab4.5_0002306g0010 Nicotiana tabacum HOM05D008092 ORTHO05D010277 2.6e-24 116.7 124 46.0
Oeu063467.1 Olea europaea HOM05D008092 ORTHO05D010277 4.5e-24 115.9 223 35.9
PSO478G3237 Papaver somniferum HOM05D008092 ORTHO05D010277 2.5e-22 110.2 231 34.2
Medtr6g005430 Medicago truncatula HOM05D008092 ORTHO05D010277 5.5e-22 109.0 209 37.3
Haze_14721 Corylus avellana HOM05D008092 ORTHO05D010277 6.0e-21 105.5 153 41.8
Eucgr.I01759 Eucalyptus grandis HOM05D008092 ORTHO05D010277 6.0e-21 105.5 119 47.1
PSO017G5173 Papaver somniferum HOM05D008092 ORTHO05D010277 1.0e-20 104.8 231 32.9
Haze_14716 Corylus avellana HOM05D008092 ORTHO05D010277 2.3e-20 103.6 157 43.3
Nn3g16773 Nelumbo nucifera HOM05D008092 ORTHO05D010277 5.7e-19 99.0 227 33.0
Eucgr.I01763 Eucalyptus grandis HOM05D008092 ORTHO05D010277 7.4e-19 98.6 111 46.8
Mapoly0035s0098 Marchantia polymorpha HOM05D008092 ORTHO05D010277 3.2e-14 83.2 119 35.3
HanXRQChr09g0268661 Helianthus annuus HOM05D008092 ORTHO05D010277 1.5e-11 74.3 67 52.2
MELO3C009977.2 Cucumis melo HOM05D008092 ORTHO05D010277 1.7e-10 70.9 151 31.8
TPR.G15211 Trifolium pratense HOM05D008092 ORTHO05D010277 1.1e-09 68.2 112 41.1
SEGI_08853 Sequoiadendron giganteum HOM05D008092 ORTHO05D004758 9.1e-09 65.1 111 35.1
TPR.G11017 Trifolium pratense HOM05D008092 ORTHO05D010277 1.2e-08 64.7 50 58.0
Pp3c2_13540 Physcomitrium patens HOM05D008092 ORTHO05D010277 3.4e-08 63.2 118 29.7
Pp3c3_2330 Physcomitrium patens HOM05D008092 ORTHO05D010277 7.7e-08 62.0 190 26.8


User provided reference genes

Program Settings