Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro05779 Vaccinium macrocarpon HOM05D006434 ORTHO05D008069 2.8e-180 635.2 321 100.0
Rhsim10G0029400 Rhododendron simsii HOM05D006434 ORTHO05D008069 1.4e-155 553.1 320 87.2
Dinv35002 Davidia involucrata HOM05D006434 ORTHO05D008069 6.6e-142 507.7 320 80.3
CSS0004781 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 1.7e-137 493.0 326 77.9
CSS0040499 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 1.7e-137 493.0 337 76.0
Actinidia06053 Actinidia chinensis HOM05D006434 ORTHO05D008069 1.1e-133 480.3 320 77.5
GSVIVG01032566001 Vitis vinifera HOM05D006434 ORTHO05D008069 4.0e-131 471.9 320 75.6
Cfa007492 Carpinus fangiana HOM05D006434 ORTHO05D008069 1.2e-130 470.3 321 75.7
TAR629G3263 Trochodendron aralioides HOM05D006434 ORTHO05D008069 3.9e-126 455.3 321 72.3
CAN.G1128.11 Capsicum annuum HOM05D006434 ORTHO05D008069 2.5e-125 452.6 323 72.1
Hma1.2p1_0136F.1_g062090 Hydrangea macrophylla HOM05D006434 ORTHO05D008069 3.3e-125 452.2 266 82.3
PGSC0003DMG400006900 Solanum tuberosum HOM05D006434 ORTHO05D008069 3.1e-123 445.7 323 70.6
Solyc02g067540.3 Solanum lycopersicum HOM05D006434 ORTHO05D008069 3.4e-122 442.2 323 70.6
Sopen02g016670 Solanum pennellii HOM05D006434 ORTHO05D008069 3.4e-122 442.2 323 70.6
Atru.chr8.2465 Acer truncatum HOM05D006434 ORTHO05D008069 2.2e-121 439.5 282 75.9
Nitab4.5_0001727g0150 Nicotiana tabacum HOM05D006434 ORTHO05D008069 2.9e-121 439.1 323 70.0
Sed0011674 Sechium edule HOM05D006434 ORTHO05D008069 2.5e-120 436.0 321 70.4
Nn1g08819 Nelumbo nucifera HOM05D006434 ORTHO05D008069 9.3e-120 434.1 316 70.3
CsaV3_5G037720 Cucumis sativus L. HOM05D006434 ORTHO05D008069 1.2e-119 433.7 319 70.2
MD09G1042700 Malus domestica HOM05D006434 ORTHO05D008069 1.2e-119 433.7 322 71.4
Ciclev10012231m.g Citrus clementina HOM05D006434 ORTHO05D008069 2.7e-119 432.6 322 71.1
COL.COLO4_36989 Corchorus olitorius HOM05D006434 ORTHO05D008069 2.7e-119 432.6 322 68.0
Eucgr.I01896 Eucalyptus grandis HOM05D006434 ORTHO05D008069 2.7e-119 432.6 291 73.9
Duzib264G0249 Durio zibethinus HOM05D006434 ORTHO05D008069 3.5e-119 432.2 328 68.3
MELO3C021484.2 Cucumis melo HOM05D006434 ORTHO05D008069 4.6e-119 431.8 316 70.3
Potri.001G349800 Populus trichocarpa HOM05D006434 ORTHO05D008069 6.0e-119 431.4 321 69.8
QL02p079411 Quercus lobata HOM05D006434 ORTHO05D008069 2.3e-118 429.5 315 71.4
PGR142G2438 Punica granatum HOM05D006434 ORTHO05D008069 5.1e-118 428.3 315 68.6
CANSAT64G2331 Cannabis sativa HOM05D006434 ORTHO05D008069 1.3e-116 423.7 323 68.7
Manes.15G178000 Manihot esculenta HOM05D006434 ORTHO05D008069 2.1e-116 422.9 320 68.8
Sabra16G0229200 Salix brachista HOM05D006434 ORTHO05D008069 6.2e-116 421.4 321 69.5
Gohir.A07G216800 Gossypium hirsutum HOM05D006434 ORTHO05D008069 4.0e-115 418.7 326 68.7
Gorai.001G257900 Gossypium raimondii HOM05D006434 ORTHO05D008069 4.0e-115 418.7 301 71.4
RcHm_v2.0_Chr2g0169691 Rosa chinensis HOM05D006434 ORTHO05D008069 6.9e-115 417.9 322 69.6
Gohir.D07G223600 Gossypium hirsutum HOM05D006434 ORTHO05D008069 9.0e-115 417.5 301 71.4
CiPaw.03G032300 Carya illinoinensis HOM05D006434 ORTHO05D008069 3.4e-114 415.6 292 73.6
TWI56G0494 Tripterygium wilfordii HOM05D006434 ORTHO05D008069 3.4e-114 415.6 316 68.0
Peaxi162Scf00059g00128 Petunia axillaris HOM05D006434 ORTHO05D008069 4.5e-114 415.2 284 72.9
Cc07_g02850 Coffea canephora HOM05D006434 ORTHO05D008069 4.9e-113 411.8 308 68.8
FAN14G5872 Fragaria x ananassa HOM05D006434 ORTHO05D008069 4.9e-113 411.8 323 69.0
Oeu022866.3 Olea europaea HOM05D006434 ORTHO05D008069 1.1e-112 410.6 360 63.6
Aqoxy3G00846 Aquilegia oxysepala HOM05D006434 ORTHO05D008069 1.4e-112 410.2 304 66.1
FvH4_6g49670 Fragaria vesca HOM05D006434 ORTHO05D008069 1.9e-112 409.8 323 68.4
FAN02G4063 Fragaria x ananassa HOM05D006434 ORTHO05D008069 4.2e-112 408.7 323 68.4
Thecc.04G069300 Theobroma cacao HOM05D006434 ORTHO05D008069 7.1e-112 407.9 329 64.4
FAN05G1688 Fragaria x ananassa HOM05D006434 ORTHO05D008069 2.1e-111 406.4 319 65.8
Sc10g0004040 Simmondsia chinensis HOM05D006434 ORTHO05D008069 2.7e-111 406.0 254 78.0
AUR62018326 Chenopodium quinoa HOM05D006434 ORTHO05D008069 3.5e-111 405.6 319 68.0
Lsat_1_v5_gn_4_180280 Lactuca sativa HOM05D006434 ORTHO05D008069 4.6e-111 405.2 286 71.7
ECA232G4812 Erigeron canadensis HOM05D006434 ORTHO05D008069 5.1e-110 401.7 305 69.2
Migut.H00876 Erythranthe guttata HOM05D006434 ORTHO05D008069 8.7e-110 401.0 293 70.6
Phvul.004G023900 Phaseolus vulgaris HOM05D006434 ORTHO05D008069 1.1e-109 400.6 320 68.4
ATR0665G567 Amborella trichopoda HOM05D006434 ORTHO05D008069 1.5e-109 400.2 276 70.7
arahy.Tifrunner.gnm1.ann1.X2C98S Arachis hypogaea HOM05D006434 ORTHO05D008069 2.8e-108 396.0 328 68.3
PSO161G0076 Papaver somniferum HOM05D006434 ORTHO05D008069 2.4e-107 392.9 316 63.9
HanXRQChr15g0488521 Helianthus annuus HOM05D006434 ORTHO05D008069 3.1e-107 392.5 253 75.5
arahy.Tifrunner.gnm1.ann1.ICRE53 Arachis hypogaea HOM05D006434 ORTHO05D008069 6.9e-107 391.3 329 67.5
Lj2g0012157 Lotus japonicus HOM05D006434 ORTHO05D008069 1.2e-106 390.6 320 67.5
Medtr6g009400 Medicago truncatula HOM05D006434 ORTHO05D008069 1.2e-106 390.6 322 66.8
ClCG09G018520 Citrullus lanatus HOM05D006434 ORTHO05D008069 2.0e-106 389.8 291 69.4
MSTRG.23964 Avicennia marina HOM05D006434 ORTHO05D008069 5.0e-105 385.2 285 70.9
DCAR_006717 Daucus carota HOM05D006434 ORTHO05D008069 5.0e-105 385.2 228 82.0
TPR.G32608 Trifolium pratense HOM05D006434 ORTHO05D008069 1.1e-104 384.0 319 65.2
PSO478G2838 Papaver somniferum HOM05D006434 ORTHO05D008069 3.2e-104 382.5 315 63.5
Glyma.13G066900 Glycine max HOM05D006434 ORTHO05D008069 4.2e-104 382.1 310 65.8
VMungo0464G0451 Vigna mungo HOM05D006434 ORTHO05D008069 4.2e-104 382.1 320 65.0
EL10Ac2g02902 Beta vulgaris HOM05D006434 ORTHO05D008069 7.2e-104 381.3 346 61.8
SGA_v2.0_scaffold205G41750 Striga asiatica HOM05D006434 ORTHO05D008069 9.4e-104 380.9 312 64.1
AUR62030560 Chenopodium quinoa HOM05D006434 ORTHO05D008069 4.6e-103 378.6 330 62.4
Lalb_Chr21g0319131 Lupinus albus HOM05D006434 ORTHO05D008069 1.8e-102 376.7 324 64.5
THA.LOC104823923 Tarenaya hassleriana HOM05D006434 ORTHO05D008069 5.1e-102 375.2 251 73.7
AL5G18090 Arabidopsis lyrata HOM05D006434 ORTHO05D008069 1.3e-100 370.5 309 62.8
Sp2g17230 Schrenkiella parvula HOM05D006434 ORTHO05D008069 2.8e-100 369.4 294 65.3
unitig_744.g24344 Utricularia gibba HOM05D006434 ORTHO05D008069 2.8e-100 369.4 270 71.1
Carub.0005s0699 Capsella rubella HOM05D006434 ORTHO05D008069 3.7e-100 369.0 319 63.0
Haze_14607 Corylus avellana HOM05D006434 ORTHO05D008069 3.7e-100 369.0 293 68.6
Thhalv10004634m.g Eutrema salsugineum HOM05D006434 ORTHO05D008069 2.4e-99 366.3 275 67.3
CDE02G1577 Ceratophyllum demersum HOM05D006434 ORTHO05D008069 5.3e-99 365.2 322 58.7
BcaC06g33735 Brassica carinata HOM05D006434 ORTHO05D008069 1.2e-98 364.0 324 60.5
BolC7t44265H Brassica oleracea HOM05D006434 ORTHO05D008069 5.9e-98 361.7 316 62.0
Prupe.3G275100 Prunus persica HOM05D006434 ORTHO05D008069 7.7e-98 361.3 275 72.4
Aa31LG2G4610 Aethionema arabicum HOM05D006434 ORTHO05D008069 1.0e-97 360.9 282 66.0
FAN09G0258 Fragaria x ananassa HOM05D006434 ORTHO05D008069 1.0e-97 360.9 301 63.8
C07p37520 Brassica napus HOM05D006434 ORTHO05D008069 1.7e-97 360.1 322 61.2
CSS0001127 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 3.8e-97 359.0 223 79.4
A06p40510 Brassica napus HOM05D006434 ORTHO05D008069 8.5e-97 357.8 324 59.9
BraA06t26970Z Brassica rapa HOM05D006434 ORTHO05D008069 8.5e-97 357.8 324 59.9
CARHR292500 Cardamine hirsuta HOM05D006434 ORTHO05D008069 1.9e-96 356.7 313 60.1
Psat1g076480 Pisum sativum HOM05D006434 ORTHO05D008069 5.1e-94 348.6 279 65.9
CSS0033350 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 6.7e-94 348.2 215 80.0
HPP92_023566 Vanilla planifolia HOM05D006434 ORTHO05D008069 1.1e-91 340.9 253 66.8
Glyma.19G017500 Glycine max HOM05D006434 ORTHO05D008069 1.8e-91 340.1 197 82.7
Os03g0736400 Oryza sativa ssp. japonica HOM05D006434 ORTHO05D008069 3.1e-91 339.3 311 58.2
Lj7A404T37 Lonicera japonica HOM05D006434 ORTHO05D008069 7.0e-83 311.6 238 70.2
Cpa.g.sc14.62 Carica papaya HOM05D006434 ORTHO05D008069 2.6e-82 309.7 176 84.1
Nitab4.5_0003431g0070 Nicotiana tabacum HOM05D006434 ORTHO05D008069 5.9e-82 308.5 176 81.8
Zm00001eb215320 Zea mays HOM05D006434 ORTHO05D008069 4.7e-79 298.9 282 58.2
SalBow1G5247 Salvia bowleyana HOM05D006434 ORTHO05D008069 1.4e-78 297.4 306 54.2
Ca_04243_v3 Cicer arietinum L. HOM05D006434 ORTHO05D008069 1.8e-78 297.0 223 67.7
AT3G28460 Arabidopsis thaliana HOM05D006434 ORTHO05D008069 3.0e-78 296.2 278 59.0
CSS0043817 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 2.4e-75 286.6 179 79.3
AagrBONN_evm.TU.Sc2ySwM_344.3988 Anthoceros agrestis HOM05D006434 ORTHO05D008069 7.0e-67 258.5 196 64.8
MBI01_g13068_MAGBIO Magnolia biondii HOM05D006434 ORTHO05D008069 4.5e-66 255.8 217 63.1
Pp3c7_630 Physcomitrium patens HOM05D006434 ORTHO05D008069 1.0e-65 254.6 236 56.4
SMO171G0075 Selaginella moellendorffii HOM05D006434 ORTHO05D008069 1.3e-65 254.2 201 60.2
Hund13291 Selenicereus undatus HOM05D006434 ORTHO05D008069 2.6e-61 240.0 236 58.5
Mapoly0140s0031 Marchantia polymorpha HOM05D006434 ORTHO05D008069 1.0e-57 228.0 209 56.5
CBR_g31858 Chara braunii HOM05D006434 ORTHO05D008069 2.3e-49 200.3 253 45.8
SEGI_25544 Sequoiadendron giganteum HOM05D006434 ORTHO05D008069 3.1e-46 189.9 164 58.5
SEGI_38692 Sequoiadendron giganteum HOM05D006434 ORTHO05D008069 1.3e-41 174.5 125 66.4
PRCOL_00006620 Prasinoderma coloniale HOM05D006434 ORTHO05D008069 3.9e-41 172.9 208 43.3
Cre13.g566300 Chlamydomonas reinhardtii HOM05D006434 ORTHO05D008069 4.3e-40 169.5 234 40.6
MBI01_g13070_MAGBIO Magnolia biondii HOM05D006434 ORTHO05D008069 1.9e-32 144.1 86 79.1
Solyc01g057060.1 Solanum lycopersicum HOM05D006434 ORTHO05D008069 3.1e-30 136.7 96 69.8
Sopen01g021310 Solanum pennellii HOM05D006434 ORTHO05D008069 1.5e-29 134.4 86 76.7
MCO03G139 Micromonas commoda HOM05D006434 ORTHO05D008069 5.8e-29 132.5 120 50.8
MD17G1044100 Malus domestica HOM05D006434 ORTHO05D008069 5.6e-24 115.9 60 91.7
TAR371G0222 Trochodendron aralioides HOM05D006434 ORTHO05D008069 4.4e-21 106.3 195 43.1
Lj7A404T38 Lonicera japonica HOM05D006434 ORTHO05D008069 7.6e-13 79.0 139 37.4
Cpa.g.sc14.61 Carica papaya HOM05D006434 ORTHO05D008069 1.3e-09 68.2 120 43.3
Lsat_1_v5_gn_7_34121 Lactuca sativa HOM05D006434 ORTHO05D008069 5.1e-09 66.2 36 83.3
Actinidia36050 Actinidia chinensis HOM05D006434 ORTHO05D053052 4.0e-06 56.6 26 88.5


User provided reference genes

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