Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro05749 Vaccinium macrocarpon HOM05D002474 ORTHO05D006727 6.0e-42 173.7 85 100.0
vmacro03926 Vaccinium macrocarpon HOM05D002474 ORTHO05D006727 3.9e-33 144.4 81 86.4
RhsimUnG0054500 Rhododendron simsii HOM05D002474 ORTHO05D006727 7.7e-13 77.0 46 84.8
Sabra04G0087600 Salix brachista HOM05D002474 ORTHO05D006727 2.9e-12 75.1 66 59.1
CSS0021046 Camellia sinensis var. sinensis HOM05D002474 ORTHO05D006727 2.5e-11 72.0 40 85.0
CSS0037906 Camellia sinensis var. sinensis HOM05D002474 ORTHO05D006727 2.5e-11 72.0 40 85.0
Rhsim10G0032000 Rhododendron simsii HOM05D002474 ORTHO05D006727 5.5e-11 70.9 41 85.4
Hund13252 Selenicereus undatus HOM05D002474 ORTHO05D006727 1.2e-10 69.7 40 75.0
Lj7A402G46 Lonicera japonica HOM05D002474 ORTHO05D006727 1.6e-10 69.3 36 91.7
Ah.12g065360 Amaranthus hybridus HOM05D002474 ORTHO05D006727 2.1e-10 68.9 36 83.3
Dinv33713 Davidia involucrata HOM05D002474 ORTHO05D006727 2.7e-10 68.6 40 82.5
SalBow1G0883 Salvia bowleyana HOM05D002474 ORTHO05D006727 4.6e-10 67.8 39 82.1
FAN10G3068 Fragaria x ananassa HOM05D002474 ORTHO05D006727 7.9e-10 67.0 65 55.4
Migut.K01338 Erythranthe guttata HOM05D002474 ORTHO05D006727 1.4e-09 66.2 33 90.9
Oeu033341.3 Olea europaea HOM05D002474 ORTHO05D006727 1.4e-09 66.2 34 88.2
CAN.G1128.5 Capsicum annuum HOM05D002474 ORTHO05D006727 3.0e-09 65.1 32 93.8
Solyc02g067480.3 Solanum lycopersicum HOM05D002474 ORTHO05D006727 3.0e-09 65.1 32 93.8
Sopen02g016630 Solanum pennellii HOM05D002474 ORTHO05D006727 3.0e-09 65.1 32 93.8
HanXRQChr17g0547501 Helianthus annuus HOM05D002474 ORTHO05D006727 3.9e-09 64.7 37 75.7
Nitab4.5_0006062g0010 Nicotiana tabacum HOM05D002474 ORTHO05D006727 3.9e-09 64.7 39 79.5
PGR083G0251 Punica granatum HOM05D002474 ORTHO05D006727 5.1e-09 64.3 36 83.3
TPR.G4252 Trifolium pratense HOM05D002474 ORTHO05D006727 5.1e-09 64.3 35 77.1
Hma1.2p1_0449F.1_g154950 Hydrangea macrophylla HOM05D002474 ORTHO05D006727 6.7e-09 63.9 31 93.5
Sc11g0006920 Simmondsia chinensis HOM05D002474 ORTHO05D006727 6.7e-09 63.9 39 74.4
PGSC0003DMG400006940 Solanum tuberosum HOM05D002474 ORTHO05D006727 6.7e-09 63.9 32 90.6
ECA246G0556 Erigeron canadensis HOM05D002474 ORTHO05D006727 8.8e-09 63.5 36 80.6
QL02p080121 Quercus lobata HOM05D002474 ORTHO05D006727 8.8e-09 63.5 34 85.3
QL02p080225 Quercus lobata HOM05D002474 ORTHO05D006727 8.8e-09 63.5 34 85.3
ClCG09G018440 Citrullus lanatus HOM05D002474 ORTHO05D006727 1.1e-08 63.2 33 90.9
Eucgr.J02138 Eucalyptus grandis HOM05D002474 ORTHO05D006727 1.1e-08 63.2 48 64.6
FvH4_6g49390 Fragaria vesca HOM05D002474 ORTHO05D006727 1.1e-08 63.2 34 88.2
FAN02G0112 Fragaria x ananassa HOM05D002474 ORTHO05D006727 1.1e-08 63.2 34 88.2
FAN10G3970 Fragaria x ananassa HOM05D002474 ORTHO05D006727 1.1e-08 63.2 34 88.2
FAN14G2185 Fragaria x ananassa HOM05D002474 ORTHO05D006727 1.1e-08 63.2 34 88.2
RcHm_v2.0_Chr2g0169251 Rosa chinensis HOM05D002474 ORTHO05D006727 1.1e-08 63.2 34 88.2
SGA_v2.0_scaffold224G42953 Striga asiatica HOM05D002474 ORTHO05D006727 1.1e-08 63.2 33 84.8
VMungo0464G0136 Vigna mungo HOM05D002474 ORTHO05D006727 1.1e-08 63.2 37 73.0
Ca_04259_v3 Cicer arietinum L. HOM05D002474 ORTHO05D006727 1.5e-08 62.8 35 74.3
Cc07_g02930 Coffea canephora HOM05D002474 ORTHO05D006727 1.5e-08 62.8 41 70.7
Medtr6g011270 Medicago truncatula HOM05D002474 ORTHO05D006727 1.5e-08 62.8 35 74.3
Phvul.004G025500 Phaseolus vulgaris HOM05D002474 ORTHO05D006727 1.5e-08 62.8 35 74.3
Potri.004G130000 Populus trichocarpa HOM05D002474 ORTHO05D006727 1.5e-08 62.8 34 85.3
EL10Ac2g02929 Beta vulgaris HOM05D002474 ORTHO05D006727 1.9e-08 62.4 31 87.1
Cpa.g.sc14.49 Carica papaya HOM05D002474 ORTHO05D006727 1.9e-08 62.4 36 80.6
AUR62018296 Chenopodium quinoa HOM05D002474 ORTHO05D006727 1.9e-08 62.4 36 77.8
Nn4g23008 Nelumbo nucifera HOM05D002474 ORTHO05D006727 1.9e-08 62.4 39 71.8
FAN05G2709 Fragaria x ananassa HOM05D002474 ORTHO05D006727 2.5e-08 62.0 33 87.9
Atru.chr8.2476 Acer truncatum HOM05D002474 ORTHO05D006727 3.3e-08 61.6 31 90.3
AUR62031654 Chenopodium quinoa HOM05D002474 ORTHO05D006727 3.3e-08 61.6 33 84.8
MELO3C021965.2 Cucumis melo HOM05D002474 ORTHO05D006727 3.3e-08 61.6 31 90.3
CsaV3_5G037800 Cucumis sativus L. HOM05D002474 ORTHO05D006727 3.3e-08 61.6 31 90.3
Duzib168G1861 Durio zibethinus HOM05D002474 ORTHO05D006727 3.3e-08 61.6 31 90.3
GSVIVG01032597001 Vitis vinifera HOM05D002474 ORTHO05D006727 3.3e-08 61.6 34 82.4
Carub.0007s3579 Capsella rubella HOM05D002474 ORTHO05D006727 4.3e-08 61.2 33 81.8
Lsat_1_v5_gn_3_102300 Lactuca sativa HOM05D002474 ORTHO05D006727 4.3e-08 61.2 34 82.4
PSO161G0033 Papaver somniferum HOM05D002474 ORTHO05D006727 4.3e-08 61.2 34 79.4
PSO478G4089 Papaver somniferum HOM05D002474 ORTHO05D006727 4.3e-08 61.2 34 79.4
CiPaw.04G020500 Carya illinoinensis HOM05D002474 ORTHO05D006727 5.7e-08 60.8 31 90.3
AT5G39940 Arabidopsis thaliana HOM05D002474 ORTHO05D006727 7.4e-08 60.5 31 87.1
Ciclev10011620m.g Citrus clementina HOM05D002474 ORTHO05D006727 7.4e-08 60.5 31 87.1
Os12g0638800 Oryza sativa ssp. japonica HOM05D002474 ORTHO05D006727 7.4e-08 60.5 31 87.1
Zm00001eb033100 Zea mays HOM05D002474 ORTHO05D006727 7.4e-08 60.5 31 87.1
AL7G50200 Arabidopsis lyrata HOM05D002474 ORTHO05D006727 9.7e-08 60.1 41 68.3
Cfa007503 Carpinus fangiana HOM05D002474 ORTHO05D006727 9.7e-08 60.1 34 79.4
Haze_14590 Corylus avellana HOM05D002474 ORTHO05D006727 9.7e-08 60.1 34 79.4
Aa31LG9G1670 Aethionema arabicum HOM05D002474 ORTHO05D006727 1.3e-07 59.7 31 87.1
ATR0609G116 Amborella trichopoda HOM05D002474 ORTHO05D006727 1.3e-07 59.7 32 81.2
Aqoxy3G00804 Aquilegia oxysepala HOM05D002474 ORTHO05D006727 1.3e-07 59.7 33 81.8
BraA04t16928Z Brassica rapa HOM05D002474 ORTHO05D006727 1.3e-07 59.7 31 87.1
Thhalv10028129m.g Eutrema salsugineum HOM05D002474 ORTHO05D006727 1.3e-07 59.7 31 87.1
Lj2g0026556 Lotus japonicus HOM05D002474 ORTHO05D006727 1.3e-07 59.7 39 66.7
THA.LOC104805441 Tarenaya hassleriana HOM05D002474 ORTHO05D006727 1.3e-07 59.7 34 76.5
Thecc.09G254500 Theobroma cacao HOM05D002474 ORTHO05D006727 1.3e-07 59.7 31 83.9
COL.COLO4_24935 Corchorus olitorius HOM05D002474 ORTHO05D006727 1.7e-07 59.3 31 87.1
Psat1g077640 Pisum sativum HOM05D002474 ORTHO05D006727 1.7e-07 59.3 32 78.1
Gohir.A13G220300 Gossypium hirsutum HOM05D002474 ORTHO05D006727 2.2e-07 58.9 31 83.9
Gohir.D13G224300 Gossypium hirsutum HOM05D002474 ORTHO05D006727 2.2e-07 58.9 31 83.9
Gorai.013G255100 Gossypium raimondii HOM05D002474 ORTHO05D006727 2.2e-07 58.9 31 83.9
HPP92_014139 Vanilla planifolia HOM05D002474 ORTHO05D006727 2.8e-07 58.5 31 83.9
CARHR262240 Cardamine hirsuta HOM05D002474 ORTHO05D006727 3.7e-07 58.2 31 83.9
arahy.Tifrunner.gnm1.ann1.B2F8E8 Arachis hypogaea HOM05D002474 ORTHO05D006727 4.8e-07 57.8 31 80.6
arahy.Tifrunner.gnm1.ann1.DRNA5E Arachis hypogaea HOM05D002474 ORTHO05D006727 4.8e-07 57.8 31 80.6
Lalb_Chr06g0175531 Lupinus albus HOM05D002474 ORTHO05D006727 4.8e-07 57.8 33 72.7
TWI60G0106 Tripterygium wilfordii HOM05D002474 ORTHO05D006727 6.3e-07 57.4 34 73.5
AagrBONN_evm.TU.Sc2ySwM_369.199 Anthoceros agrestis HOM05D002474 ORTHO05D006727 8.2e-07 57.0 47 57.4
unitig_748.g8621 Utricularia gibba HOM05D002474 ORTHO05D006727 8.2e-07 57.0 31 80.6
CANSAT64G2711 Cannabis sativa HOM05D002474 ORTHO05D006727 1.1e-06 56.6 32 78.1
CDE08G1502 Ceratophyllum demersum HOM05D002474 ORTHO05D006727 6.9e-06 53.9 31 71.0


User provided reference genes

Program Settings