Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro05683 Vaccinium macrocarpon HOM05D002400 ORTHO05D002568 3.7e-238 827.8 406 100.0
vmacro12117 Vaccinium macrocarpon HOM05D002400 ORTHO05D002568 1.2e-103 380.9 415 54.0
vmacro05682 Vaccinium macrocarpon HOM05D002400 ORTHO05D002568 1.1e-61 241.5 371 41.5
vmacro12123 Vaccinium macrocarpon HOM05D002400 ORTHO05D002568 2.1e-60 237.3 368 39.4
Prupe.7G108600 Prunus persica HOM05D002400 ORTHO05D002568 4.3e-29 133.3 370 31.1
FAN18G1895 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.6e-28 130.2 333 32.1
RcHm_v2.0_Chr3g0473911 Rosa chinensis HOM05D002400 ORTHO05D002568 3.1e-27 127.1 369 29.5
FAN18G2424 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.5e-26 124.8 387 28.9
MD14G1024100 Malus domestica HOM05D002400 ORTHO05D002568 1.5e-26 124.8 350 28.9
RcHm_v2.0_Chr3g0474031 Rosa chinensis HOM05D002400 ORTHO05D002568 3.4e-26 123.6 372 26.6
MD04G1058800 Malus domestica HOM05D002400 ORTHO05D002568 9.9e-26 122.1 379 28.8
QL02p059625 Quercus lobata HOM05D002400 ORTHO05D002568 1.7e-25 121.3 366 28.1
RcHm_v2.0_Chr3g0475391 Rosa chinensis HOM05D002400 ORTHO05D002568 1.7e-25 121.3 358 28.5
FvH4_5g26390 Fragaria vesca HOM05D002400 ORTHO05D002568 4.9e-25 119.8 321 31.8
RcHm_v2.0_Chr7g0205891 Rosa chinensis HOM05D002400 ORTHO05D002568 4.9e-25 119.8 359 31.5
FAN05G4159 Fragaria x ananassa HOM05D002400 ORTHO05D002568 8.4e-25 119.0 368 28.8
RcHm_v2.0_Chr3g0474091 Rosa chinensis HOM05D002400 ORTHO05D002568 8.4e-25 119.0 370 27.8
FAN18G4571 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.1e-24 118.6 378 29.1
MD14G1026400 Malus domestica HOM05D002400 ORTHO05D002568 1.4e-24 118.2 371 28.3
FAN02G4410 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.2e-24 117.1 372 26.3
FAN14G2096 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.2e-24 117.1 372 26.3
MD14G1026300 Malus domestica HOM05D002400 ORTHO05D002568 5.4e-24 116.3 354 28.5
FvH4_6g19030 Fragaria vesca HOM05D002400 ORTHO05D002568 7.1e-24 115.9 369 26.3
FvH4_6g18920 Fragaria vesca HOM05D002400 ORTHO05D002568 1.2e-23 115.2 368 28.3
FvH4_5g26410 Fragaria vesca HOM05D002400 ORTHO05D002568 1.6e-23 114.8 292 29.8
FvH4_5g20530 Fragaria vesca HOM05D002400 ORTHO05D002568 2.1e-23 114.4 378 28.0
RcHm_v2.0_Chr3g0474041 Rosa chinensis HOM05D002400 ORTHO05D002568 2.7e-23 114.0 423 26.0
RcHm_v2.0_Chr3g0474111 Rosa chinensis HOM05D002400 ORTHO05D002568 2.7e-23 114.0 372 26.6
MD14G1025300 Malus domestica HOM05D002400 ORTHO05D002568 3.5e-23 113.6 368 27.2
MD14G1025600 Malus domestica HOM05D002400 ORTHO05D002568 3.5e-23 113.6 356 27.2
MD00G1221800 Malus domestica HOM05D002400 ORTHO05D002568 2.3e-22 110.9 227 32.6
RcHm_v2.0_Chr5g0068981 Rosa chinensis HOM05D002400 ORTHO05D002568 2.3e-22 110.9 239 31.8
RcHm_v2.0_Chr7g0205961 Rosa chinensis HOM05D002400 ORTHO05D002568 2.3e-22 110.9 390 28.5
Haze_21106 Corylus avellana HOM05D002400 ORTHO05D002568 3.0e-22 110.5 374 29.4
MD14G1024900 Malus domestica HOM05D002400 ORTHO05D002568 3.0e-22 110.5 377 26.0
FAN14G5626 Fragaria x ananassa HOM05D002400 ORTHO05D002568 5.1e-22 109.8 306 30.7
FAN05G1326 Fragaria x ananassa HOM05D002400 ORTHO05D002568 8.7e-22 109.0 374 29.1
FAN09G2665 Fragaria x ananassa HOM05D002400 ORTHO05D002568 8.7e-22 109.0 366 27.6
Prupe.2G052100 Prunus persica HOM05D002400 ORTHO05D002568 8.7e-22 109.0 223 34.1
FAN08G0492 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.5e-21 108.2 328 30.5
MD14G1025200 Malus domestica HOM05D002400 ORTHO05D002568 1.5e-21 108.2 376 27.9
FAN05G4425 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.9e-21 107.8 348 28.7
MD12G1202000 Malus domestica HOM05D002400 ORTHO05D002568 2.5e-21 107.5 362 26.5
MD14G1025400 Malus domestica HOM05D002400 ORTHO05D002568 4.3e-21 106.7 370 26.8
RcHm_v2.0_Chr5g0069001 Rosa chinensis HOM05D002400 ORTHO05D002568 4.3e-21 106.7 405 24.4
Prupe.7G106400 Prunus persica HOM05D002400 ORTHO05D002568 5.6e-21 106.3 221 30.8
Manes.09G032300 Manihot esculenta HOM05D002400 ORTHO05D002568 7.3e-21 105.9 386 26.4
RcHm_v2.0_Chr3g0474191 Rosa chinensis HOM05D002400 ORTHO05D002568 1.3e-20 105.1 353 28.3
FAN05G2917 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.1e-20 104.4 363 27.8
FAN14G4887 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.8e-20 104.0 231 33.3
Cfa017093 Carpinus fangiana HOM05D002400 ORTHO05D002568 3.6e-20 103.6 374 28.3
FvH4_5g32301 Fragaria vesca HOM05D002400 ORTHO05D002568 3.6e-20 103.6 349 28.1
MD14G1026600 Malus domestica HOM05D002400 ORTHO05D002568 3.6e-20 103.6 377 28.1
FvH4_6g19020 Fragaria vesca HOM05D002400 ORTHO05D002568 6.2e-20 102.8 370 24.3
FvH4_6g19010 Fragaria vesca HOM05D002400 ORTHO05D002568 1.4e-19 101.7 346 28.0
Prupe.1G551800 Prunus persica HOM05D002400 ORTHO05D002568 1.8e-19 101.3 368 26.4
FAN14G4031 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.4e-19 100.9 349 28.9
FvH4_6g18950 Fragaria vesca HOM05D002400 ORTHO05D002568 3.1e-19 100.5 259 32.4
FAN18G0208 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.1e-19 100.5 207 34.8
FAN08G1360 Fragaria x ananassa HOM05D002400 ORTHO05D002568 4.0e-19 100.1 361 26.9
FAN19G0785 Fragaria x ananassa HOM05D002400 ORTHO05D002568 4.0e-19 100.1 233 30.0
FAN18G0377 Fragaria x ananassa HOM05D002400 ORTHO05D002568 5.3e-19 99.8 287 31.7
MD12G1201900 Malus domestica HOM05D002400 ORTHO05D002568 6.9e-19 99.4 297 29.3
FAN26G2620 Fragaria x ananassa HOM05D002400 ORTHO05D002568 9.0e-19 99.0 327 26.9
RcHm_v2.0_Chr3g0474001 Rosa chinensis HOM05D002400 ORTHO05D002568 2.0e-18 97.8 349 26.9
FvH4_6g33902 Fragaria vesca HOM05D002400 ORTHO05D002568 3.4e-18 97.1 218 31.7
MD14G1026700 Malus domestica HOM05D002400 ORTHO05D002568 3.4e-18 97.1 230 33.5
RcHm_v2.0_Chr3g0473961 Rosa chinensis HOM05D002400 ORTHO05D002568 3.4e-18 97.1 253 33.6
RcHm_v2.0_Chr3g0458171 Rosa chinensis HOM05D002400 ORTHO05D002568 4.5e-18 96.7 363 26.4
FvH4_6g22710 Fragaria vesca HOM05D002400 ORTHO05D002568 5.8e-18 96.3 216 33.3
FAN14G2794 Fragaria x ananassa HOM05D002400 ORTHO05D002568 5.8e-18 96.3 216 33.3
Prupe.6G269600 Prunus persica HOM05D002400 ORTHO05D002568 1.3e-17 95.1 205 34.1
FAN03G0307 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.7e-17 94.7 224 31.7
FAN09G1471 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.7e-17 94.7 370 23.2
RcHm_v2.0_Chr3g0475381 Rosa chinensis HOM05D002400 ORTHO05D002568 3.8e-17 93.6 251 30.3
FAN14G5260 Fragaria x ananassa HOM05D002400 ORTHO05D002568 4.9e-17 93.2 216 32.9
FAN06G1414 Fragaria x ananassa HOM05D002400 ORTHO05D002568 8.4e-17 92.4 224 31.2
FvH4_6g18911 Fragaria vesca HOM05D002400 ORTHO05D002568 1.9e-16 91.3 227 32.2
FvH4_7g04740 Fragaria vesca HOM05D002400 ORTHO05D002568 2.4e-16 90.9 369 27.4
MD12G1025400 Malus domestica HOM05D002400 ORTHO05D002568 3.2e-16 90.5 349 26.1
FvH4_1g23521 Fragaria vesca HOM05D002400 ORTHO05D002568 5.4e-16 89.7 217 30.9
FAN13G3133 Fragaria x ananassa HOM05D002400 ORTHO05D002568 5.4e-16 89.7 291 27.8
MD12G1026800 Malus domestica HOM05D002400 ORTHO05D002568 7.1e-16 89.4 230 27.4
FAN04G1411 Fragaria x ananassa HOM05D002400 ORTHO05D002568 9.3e-16 89.0 308 29.5
Dinv05457 Davidia involucrata HOM05D002400 ORTHO05D002568 1.2e-15 88.6 213 33.3
FvH4_6g08300 Fragaria vesca HOM05D002400 ORTHO05D002568 1.6e-15 88.2 382 25.7
FAN08G3157 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.6e-15 88.2 172 37.8
FAN09G4576 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.6e-15 88.2 251 27.1
FAN14G3017 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.6e-15 88.2 382 25.7
FAN05G1596 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.7e-15 87.4 359 27.0
FAN14G3084 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.5e-15 87.0 224 26.3
Prupe.6G311500 Prunus persica HOM05D002400 ORTHO05D002568 4.6e-15 86.7 394 24.1
Haze_04784 Corylus avellana HOM05D002400 ORTHO05D002568 6.0e-15 86.3 366 25.1
FAN06G0647 Fragaria x ananassa HOM05D002400 ORTHO05D002568 6.0e-15 86.3 316 27.8
FAN06G4070 Fragaria x ananassa HOM05D002400 ORTHO05D002568 6.0e-15 86.3 224 31.7
MD14G1025100 Malus domestica HOM05D002400 ORTHO05D002568 6.0e-15 86.3 226 28.8
FAN09G1480 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.0e-14 85.5 359 26.7
FAN04G1392 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.0e-14 84.0 357 25.5
FAN18G0337 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.0e-14 84.0 356 25.3
RcHm_v2.0_Chr1g0330111 Rosa chinensis HOM05D002400 ORTHO05D002568 6.7e-14 82.8 211 28.4
Dinv02731 Davidia involucrata HOM05D002400 ORTHO05D002568 8.7e-14 82.4 351 25.4
FvH4_6g19051 Fragaria vesca HOM05D002400 ORTHO05D002568 1.1e-13 82.0 332 24.4
FAN02G3141 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.1e-13 82.0 167 34.1
Dinv02723 Davidia involucrata HOM05D002400 ORTHO05D002568 1.5e-13 81.6 251 28.3
FvH4_5g29160 Fragaria vesca HOM05D002400 ORTHO05D002568 1.5e-13 81.6 356 25.0
FvH4_7g12363 Fragaria vesca HOM05D002400 ORTHO05D002568 1.5e-13 81.6 217 32.3
FAN09G4054 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.5e-13 81.6 212 32.1
FAN14G3389 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.9e-13 81.3 214 31.3
FAN14G5637 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.9e-13 81.3 214 31.3
FAN18G0566 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.9e-13 81.3 250 29.6
MD14G1157200 Malus domestica HOM05D002400 ORTHO05D002568 2.5e-13 80.9 355 27.6
FvH4_6g05280 Fragaria vesca HOM05D002400 ORTHO05D002568 3.3e-13 80.5 214 31.3
Dinv02727 Davidia involucrata HOM05D002400 ORTHO05D002568 7.4e-13 79.3 216 31.0
FvH4_6g18954 Fragaria vesca HOM05D002400 ORTHO05D002568 7.4e-13 79.3 162 34.0
FvH4_6g19040 Fragaria vesca HOM05D002400 ORTHO05D002568 9.6e-13 79.0 206 29.1
FvH4_6g33920 Fragaria vesca HOM05D002400 ORTHO05D002568 9.6e-13 79.0 174 33.3
FvH4_6g18982 Fragaria vesca HOM05D002400 ORTHO05D002568 1.3e-12 78.6 185 32.4
Haze_04775 Corylus avellana HOM05D002400 ORTHO05D002568 1.6e-12 78.2 226 31.0
FvH4_6g19361 Fragaria vesca HOM05D002400 ORTHO05D002568 1.6e-12 78.2 310 27.4
MD14G1026000 Malus domestica HOM05D002400 ORTHO05D002568 2.8e-12 77.4 297 26.6
FAN05G2337 Fragaria x ananassa HOM05D002400 ORTHO05D002568 4.8e-12 76.6 215 30.2
FAN14G5714 Fragaria x ananassa HOM05D002400 ORTHO05D002568 4.8e-12 76.6 310 27.4
Dinv05456 Davidia involucrata HOM05D002400 ORTHO05D002568 6.2e-12 76.3 216 30.6
FAN04G0043 Fragaria x ananassa HOM05D002400 ORTHO05D002568 6.2e-12 76.3 141 36.9
FAN06G2837 Fragaria x ananassa HOM05D002400 ORTHO05D002568 8.1e-12 75.9 247 29.6
FvH4_5g31730 Fragaria vesca HOM05D002400 ORTHO05D002568 1.1e-11 75.5 269 27.1
FvH4_5g20611 Fragaria vesca HOM05D002400 ORTHO05D002568 1.8e-11 74.7 316 24.7
Prupe.7G105900 Prunus persica HOM05D002400 ORTHO05D002568 3.1e-11 73.9 154 33.1
Haze_06898 Corylus avellana HOM05D002400 ORTHO05D002568 4.0e-11 73.6 257 26.5
CiPaw.12G069200 Carya illinoinensis HOM05D002400 ORTHO05D002568 9.0e-11 72.4 350 25.1
Prupe.5G196300 Prunus persica HOM05D002400 ORTHO05D002568 9.0e-11 72.4 314 26.1
Prupe.7G105500 Prunus persica HOM05D002400 ORTHO05D002568 2.0e-10 71.2 154 31.8
MD04G1145500 Malus domestica HOM05D002400 ORTHO05D002568 2.6e-10 70.9 238 25.6
Cfa017157 Carpinus fangiana HOM05D002400 ORTHO05D002568 3.4e-10 70.5 221 26.7
RcHm_v2.0_Chr3g0474021 Rosa chinensis HOM05D002400 ORTHO05D002568 3.4e-10 70.5 143 33.6
Cfa005421 Carpinus fangiana HOM05D002400 ORTHO05D002568 5.8e-10 69.7 367 25.1
FAN02G2106 Fragaria x ananassa HOM05D002400 ORTHO05D002568 5.8e-10 69.7 224 25.0
RcHm_v2.0_Chr7g0217271 Rosa chinensis HOM05D002400 ORTHO05D002568 1.0e-09 68.9 151 33.8
RcHm_v2.0_Chr3g0474141 Rosa chinensis HOM05D002400 ORTHO05D002568 2.2e-09 67.8 366 23.5
FvH4_1g16170 Fragaria vesca HOM05D002400 ORTHO05D002568 6.5e-09 66.2 90 38.9
MD12G1026500 Malus domestica HOM05D002400 ORTHO05D002568 6.5e-09 66.2 142 30.3
Duzib132G1153 Durio zibethinus HOM05D002400 ORTHO05D002568 1.1e-08 65.5 233 27.5
Cfa005419 Carpinus fangiana HOM05D002400 ORTHO05D002568 1.4e-08 65.1 367 23.7
FvH4_6g19370 Fragaria vesca HOM05D002400 ORTHO05D002568 1.4e-08 65.1 319 25.4
FAN05G1294 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.4e-08 65.1 117 32.5
Haze_01604 Corylus avellana HOM05D002400 ORTHO05D002568 1.9e-08 64.7 70 47.1
FAN14G5775 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.9e-08 64.7 319 26.3
FAN10G1459 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.2e-08 63.9 203 26.1
Cfa005420 Carpinus fangiana HOM05D002400 ORTHO05D002568 5.5e-08 63.2 348 24.7
Haze_21068 Corylus avellana HOM05D002400 ORTHO05D002568 5.5e-08 63.2 71 45.1
Rhsim06G0028200 Rhododendron simsii HOM05D000862 ORTHO05D000943 7.1e-08 62.8 151 31.1
Dinv28036 Davidia involucrata HOM05D002400 ORTHO05D002568 9.3e-08 62.4 217 27.6
Prupe.7G105600 Prunus persica HOM05D002400 ORTHO05D002568 1.2e-07 62.0 210 25.7
Cfa000125 Carpinus fangiana HOM05D002400 ORTHO05D002568 1.6e-07 61.6 67 44.8
COL.COLO4_29802 Corchorus olitorius HOM05D002400 ORTHO05D002568 2.1e-07 61.2 74 39.2
MD12G1217800 Malus domestica HOM05D002400 ORTHO05D002568 2.1e-07 61.2 162 30.2
FAN18G0503 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.7e-07 60.8 74 40.5
Cfa000126 Carpinus fangiana HOM05D002400 ORTHO05D002568 3.5e-07 60.5 71 42.3
FAN09G3087 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.5e-07 60.5 157 28.0
Prupe.7G105000 Prunus persica HOM05D002400 ORTHO05D002568 3.5e-07 60.5 144 31.9
Prupe.7G106200 Prunus persica HOM05D002400 ORTHO05D002568 3.5e-07 60.5 142 33.1
MD02G1269000 Malus domestica HOM05D002400 ORTHO05D002568 1.0e-06 58.9 79 40.5
Haze_24215 Corylus avellana HOM05D002400 ORTHO05D002568 1.8e-06 58.2 227 29.1
FvH4_6g18961 Fragaria vesca HOM05D002400 ORTHO05D002568 3.0e-06 57.4 155 29.7
Cfa012832 Carpinus fangiana HOM05D002400 ORTHO05D002568 3.9e-06 57.0 69 40.6
FAN14G5794 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.9e-06 57.0 230 25.2
Haze_24470 Corylus avellana HOM05D002400 ORTHO05D002568 6.7e-06 56.2 113 29.2
FAN08G3505 Fragaria x ananassa HOM05D002400 ORTHO05D002568 6.7e-06 56.2 54 55.6


User provided reference genes

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