Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro05665 Vaccinium macrocarpon HOM05D005960 ORTHO05D007537 2.9e-252 874.8 453 100.0
Rhsim10G0047200 Rhododendron simsii HOM05D005960 ORTHO05D007537 2.1e-234 815.5 474 87.8
Rhsim10G0046600 Rhododendron simsii HOM05D005960 ORTHO05D007537 8.0e-234 813.5 474 88.8
Actinidia01975 Actinidia chinensis HOM05D005960 ORTHO05D007537 1.2e-229 799.7 462 90.0
CSS0003743 Camellia sinensis var. sinensis HOM05D005960 ORTHO05D007537 3.6e-226 788.1 458 90.0
CSS0005506 Camellia sinensis var. sinensis HOM05D005960 ORTHO05D007537 4.7e-226 787.7 458 89.7
Hma1.2p1_3044F.1_g332080 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 4.0e-225 784.6 455 88.6
GSVIVG01011490001 Vitis vinifera HOM05D005960 ORTHO05D007537 4.0e-225 784.6 456 89.5
Cfa007624 Carpinus fangiana HOM05D005960 ORTHO05D007537 5.9e-221 770.8 457 85.3
MD17G1056600 Malus domestica HOM05D005960 ORTHO05D007537 1.0e-220 770.0 454 84.6
RcHm_v2.0_Chr2g0166541 Rosa chinensis HOM05D005960 ORTHO05D007537 2.9e-220 768.5 456 84.4
Potri.017G090100 Populus trichocarpa HOM05D005960 ORTHO05D007537 3.2e-219 765.0 458 86.5
TAR371G0518 Trochodendron aralioides HOM05D005960 ORTHO05D007537 3.2e-219 765.0 454 84.1
Atru.chr8.386 Acer truncatum HOM05D005960 ORTHO05D007537 4.2e-219 764.6 457 84.5
CiPaw.04G058500 Carya illinoinensis HOM05D005960 ORTHO05D007537 4.2e-219 764.6 454 83.7
Manes.01G099100 Manihot esculenta HOM05D005960 ORTHO05D007537 4.7e-218 761.1 452 84.1
Oeu000854.1 Olea europaea HOM05D005960 ORTHO05D007537 2.3e-217 758.8 468 81.0
Eucgr.I01985 Eucalyptus grandis HOM05D005960 ORTHO05D007537 4.0e-217 758.1 456 83.1
PGR004G2687 Punica granatum HOM05D005960 ORTHO05D007537 6.8e-217 757.3 456 83.8
Ca_04868_v3 Cicer arietinum L. HOM05D005960 ORTHO05D007537 8.8e-217 756.9 454 83.7
FvH4_6g47510 Fragaria vesca HOM05D005960 ORTHO05D007537 8.8e-217 756.9 453 83.7
QL02p039477 Quercus lobata HOM05D005960 ORTHO05D007537 2.0e-216 755.7 463 83.4
CANSAT64G2728 Cannabis sativa HOM05D005960 ORTHO05D007537 2.6e-216 755.4 452 85.2
Cpa.g.sc14.144 Carica papaya HOM05D005960 ORTHO05D007537 9.8e-216 753.4 453 83.2
FAN05G2671 Fragaria x ananassa HOM05D005960 ORTHO05D007537 9.8e-216 753.4 456 82.9
TPR.G26197 Trifolium pratense HOM05D005960 ORTHO05D007537 1.7e-215 752.7 454 83.0
QL02p039732 Quercus lobata HOM05D005960 ORTHO05D007537 3.7e-215 751.5 463 81.6
ClCG11G004630 Citrullus lanatus HOM05D005960 ORTHO05D007537 5.4e-214 747.7 454 83.0
Thecc.04G090800 Theobroma cacao HOM05D005960 ORTHO05D007537 1.2e-213 746.5 461 81.1
THA.LOC104802965 Tarenaya hassleriana HOM05D005960 ORTHO05D007537 3.5e-213 745.0 451 82.5
Sabra17G0079200 Salix brachista HOM05D005960 ORTHO05D007537 7.8e-213 743.8 474 82.7
MBI16_g15532_MAGBIO Magnolia biondii HOM05D005960 ORTHO05D007537 1.3e-212 743.0 454 81.7
Aqoxy3G00406 Aquilegia oxysepala HOM05D005960 ORTHO05D007537 1.7e-212 742.7 455 81.8
MELO3C022021.2 Cucumis melo HOM05D005960 ORTHO05D007537 2.3e-212 742.3 454 82.8
Phvul.004G033300 Phaseolus vulgaris HOM05D005960 ORTHO05D007537 3.8e-212 741.5 454 82.4
CsaV3_5G038400 Cucumis sativus L. HOM05D005960 ORTHO05D007537 6.6e-212 740.7 454 83.0
TWI60G0302 Tripterygium wilfordii HOM05D005960 ORTHO05D007537 1.5e-211 739.6 453 81.7
Glyma.19G027400 Glycine max HOM05D005960 ORTHO05D007537 1.9e-211 739.2 453 80.8
Lj2g0023614 Lotus japonicus HOM05D005960 ORTHO05D007537 4.3e-211 738.0 455 82.9
Medtr6g013750 Medicago truncatula HOM05D005960 ORTHO05D007537 9.5e-211 736.9 454 81.3
Glyma.13G059000 Glycine max HOM05D005960 ORTHO05D007537 1.2e-210 736.5 453 80.6
Sed0006667 Sechium edule HOM05D005960 ORTHO05D007537 2.8e-210 735.3 449 82.4
VMungo0464G0831 Vigna mungo HOM05D005960 ORTHO05D007537 2.8e-210 735.3 453 81.7
Psat1g068640 Pisum sativum HOM05D005960 ORTHO05D007537 3.6e-210 734.9 455 81.5
AUR62042562 Chenopodium quinoa HOM05D005960 ORTHO05D007537 4.7e-210 734.6 457 80.3
Haze_14472 Corylus avellana HOM05D005960 ORTHO05D007537 8.0e-210 733.8 520 76.0
Ciclev10011697m.g Citrus clementina HOM05D005960 ORTHO05D007537 1.0e-209 733.4 454 81.3
COL.COLO4_21375 Corchorus olitorius HOM05D005960 ORTHO05D007537 1.4e-209 733.0 455 80.7
Duzib147G1008 Durio zibethinus HOM05D005960 ORTHO05D007537 1.4e-209 733.0 459 80.6
arahy.Tifrunner.gnm1.ann1.8N3EDT Arachis hypogaea HOM05D005960 ORTHO05D007537 8.9e-209 730.3 462 82.3
HanXRQChr14g0448721 Helianthus annuus HOM05D005960 ORTHO05D007537 5.7e-208 727.6 455 81.3
Migut.H00653 Erythranthe guttata HOM05D005960 ORTHO05D007537 7.5e-208 727.2 454 80.8
arahy.Tifrunner.gnm1.ann1.7U9LX7 Arachis hypogaea HOM05D005960 ORTHO05D007537 9.8e-208 726.9 462 82.0
Gohir.A11G071600 Gossypium hirsutum HOM05D005960 ORTHO05D007537 1.7e-207 726.1 462 79.7
EL10Ac2g03055 Beta vulgaris HOM05D005960 ORTHO05D007537 6.4e-207 724.2 448 80.4
Gorai.007G081300 Gossypium raimondii HOM05D005960 ORTHO05D007537 6.4e-207 724.2 462 79.4
CAN.G734.6 Capsicum annuum HOM05D005960 ORTHO05D007537 3.2e-206 721.8 455 79.8
AL3G11200 Arabidopsis lyrata HOM05D005960 ORTHO05D007537 9.2e-206 720.3 456 79.2
Thhalv10020707m.g Eutrema salsugineum HOM05D005960 ORTHO05D007537 4.6e-205 718.0 454 78.6
Sopen03g016610 Solanum pennellii HOM05D005960 ORTHO05D007537 5.9e-205 717.6 426 83.3
Sp3g01070 Schrenkiella parvula HOM05D005960 ORTHO05D007537 2.3e-204 715.7 452 78.3
AT3G01060 Arabidopsis thaliana HOM05D005960 ORTHO05D007537 3.0e-204 715.3 454 78.0
Lalb_Chr06g0175111 Lupinus albus HOM05D005960 ORTHO05D007537 3.0e-204 715.3 460 79.3
Solyc03g013240.4 Solanum lycopersicum HOM05D005960 ORTHO05D007537 3.0e-204 715.3 426 82.9
Aa31LG5G12560 Aethionema arabicum HOM05D005960 ORTHO05D007537 3.9e-204 714.9 454 79.5
ECA238G1943 Erigeron canadensis HOM05D005960 ORTHO05D007537 1.1e-203 713.4 460 81.5
PSO013G0364 Papaver somniferum HOM05D005960 ORTHO05D007537 1.9e-203 712.6 455 79.6
Carub.0003s0111 Capsella rubella HOM05D005960 ORTHO05D007537 2.5e-203 712.2 456 78.5
BNapus_Darmor_BZH_scaffold_97p00050 Brassica napus HOM05D005960 ORTHO05D007537 9.5e-203 710.3 453 78.8
BolC1t05923H Brassica oleracea HOM05D005960 ORTHO05D007537 1.6e-202 709.5 453 78.6
PSO421G0059 Papaver somniferum HOM05D005960 ORTHO05D007537 1.6e-202 709.5 455 78.9
BraA01t04634Z Brassica rapa HOM05D005960 ORTHO05D007537 2.1e-202 709.1 454 78.4
BNapus_Darmor_BZH_scaffold_113p00110 Brassica napus HOM05D005960 ORTHO05D007537 4.7e-202 708.0 454 78.2
CARHR076010 Cardamine hirsuta HOM05D005960 ORTHO05D007537 4.0e-201 704.9 454 77.3
DCAR_005553 Daucus carota HOM05D005960 ORTHO05D007537 1.5e-200 703.0 430 81.9
Dinv33810 Davidia involucrata HOM05D005960 ORTHO05D007537 1.2e-197 693.3 454 82.6
SalBow1G6551 Salvia bowleyana HOM05D005960 ORTHO05D007537 1.2e-197 693.3 467 78.8
Os05g0512200 Oryza sativa ssp. japonica HOM05D005960 ORTHO05D007537 3.0e-196 688.7 382 87.4
Lsat_1_v5_gn_2_87860 Lactuca sativa HOM05D005960 ORTHO05D007537 6.6e-196 687.6 456 78.7
Peaxi162Scf00451g00429 Petunia axillaris HOM05D005960 ORTHO05D007537 2.5e-195 685.6 452 78.1
Nn4g23343 Nelumbo nucifera HOM05D005960 ORTHO05D007537 5.6e-195 684.5 362 91.7
ATR0111G015 Amborella trichopoda HOM05D005960 ORTHO05D007537 3.6e-194 681.8 458 74.7
unitig_736.g22244 Utricularia gibba HOM05D005960 ORTHO05D007537 5.2e-193 677.9 385 85.2
Lj4C116G4 Lonicera japonica HOM05D005960 ORTHO05D007537 8.9e-193 677.2 459 76.0
FAN14G4646 Fragaria x ananassa HOM05D005960 ORTHO05D007537 1.3e-191 673.3 453 76.6
FAN02G1813 Fragaria x ananassa HOM05D005960 ORTHO05D007537 4.1e-190 668.3 357 91.9
Nitab4.5_0001637g0110 Nicotiana tabacum HOM05D005960 ORTHO05D007537 2.1e-189 666.0 461 74.8
BcaC09g47681 Brassica carinata HOM05D005960 ORTHO05D007537 8.1e-186 654.1 453 74.0
Sc10g0003290 Simmondsia chinensis HOM05D005960 ORTHO05D007537 2.9e-183 645.6 370 85.1
Prupe.3G258900 Prunus persica HOM05D005960 ORTHO05D007537 3.6e-178 628.6 332 91.9
SEGI_05647 Sequoiadendron giganteum HOM05D005960 ORTHO05D007537 4.4e-176 621.7 380 78.2
Gohir.D11G075600 Gossypium hirsutum HOM05D005960 ORTHO05D007537 1.5e-171 606.7 332 88.3
Actinidia01967 Actinidia chinensis HOM05D005960 ORTHO05D007537 6.4e-167 591.3 420 78.1
Cc07_g03890 Coffea canephora HOM05D005960 ORTHO05D007537 4.3e-163 578.6 348 83.3
Pp3c2_13280 Physcomitrium patens HOM05D005960 ORTHO05D007537 3.7e-162 575.5 381 71.7
Mapoly0015s0039 Marchantia polymorpha HOM05D005960 ORTHO05D007537 4.8e-162 575.1 449 64.8
Nitab4.5_0005196g0010 Nicotiana tabacum HOM05D005960 ORTHO05D007537 2.6e-160 569.3 457 67.4
SMO335G0027 Selaginella moellendorffii HOM05D005960 ORTHO05D007537 2.2e-159 566.2 383 71.8
AUR62018147 Chenopodium quinoa HOM05D005960 ORTHO05D007537 6.4e-159 564.7 358 79.1
AagrBONN_evm.TU.Sc2ySwM_362.2259 Anthoceros agrestis HOM05D005960 ORTHO05D007537 4.5e-152 542.0 380 67.9
Zm00001eb292620 Zea mays HOM05D005960 ORTHO05D007537 1.0e-148 530.8 283 90.5
MSTRG.3021 Avicennia marina HOM05D005960 ORTHO05D007537 3.1e-145 519.2 279 89.6
Dinv11487 Davidia involucrata HOM05D005960 ORTHO05D007537 4.2e-142 508.8 309 85.1
HPP92_018459 Vanilla planifolia HOM05D005960 ORTHO05D007537 9.1e-137 491.1 326 75.2
CBR_g61504 Chara braunii HOM05D005960 ORTHO05D007537 1.2e-136 490.7 404 61.4
CDE04G1831 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 1.4e-132 477.2 417 63.5
CDE07G2056 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 4.8e-130 468.8 320 73.4
TAR627G0454 Trochodendron aralioides HOM05D005960 ORTHO05D007537 4.5e-128 462.2 332 71.7
Hma1.2p1_1813F.1_g303790 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 1.7e-127 460.3 253 92.5
Hma1.2p1_3044F.1_g332082 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 1.7e-127 460.3 253 92.5
FAN09G3416 Fragaria x ananassa HOM05D005960 ORTHO05D007537 4.7e-125 452.2 417 60.2
Cre13.g562750 Chlamydomonas reinhardtii HOM05D005960 ORTHO05D007537 5.5e-110 402.1 409 49.1
MD09G1061300 Malus domestica HOM05D005960 ORTHO05D007537 1.8e-97 360.5 242 77.7
MCO03G230 Micromonas commoda HOM05D005960 ORTHO05D007537 1.2e-77 294.7 318 48.1
MCO05G128 Micromonas commoda HOM05D005960 ORTHO05D007537 2.7e-64 250.4 337 43.3
PRCOL_00002980 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 4.2e-57 226.5 402 35.6
PRCOL_00004151 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 1.1e-52 211.8 380 36.3
CDE07G0145 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 1.2e-51 208.4 117 88.0
PRCOL_00003347 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 9.9e-51 205.3 341 35.8
MCO08G069 Micromonas commoda HOM05D005960 ORTHO05D007537 5.4e-49 199.5 349 34.7
TPR.G22619 Trifolium pratense HOM05D005960 ORTHO05D007537 4.6e-48 196.4 149 68.5
Cc07_g03900 Coffea canephora HOM05D005960 ORTHO05D007537 6.7e-47 192.6 102 88.2
AUR62018149 Chenopodium quinoa HOM05D005960 ORTHO05D007537 4.0e-44 183.3 100 89.0
MCO08G121 Micromonas commoda HOM05D005960 ORTHO05D007537 6.9e-44 182.6 367 32.7
Potri.004G125301 Populus trichocarpa HOM05D005960 ORTHO05D007537 3.4e-43 180.3 149 71.8
EL10Ac2g03064 Beta vulgaris HOM05D005960 ORTHO05D007537 3.3e-38 163.7 92 89.1
Oeu061493.1 Olea europaea HOM05D005960 ORTHO05D007537 4.5e-19 100.1 51 80.4
MD09G1061200 Malus domestica HOM05D005960 ORTHO05D007537 3.6e-16 90.5 86 54.7
PGSC0003DMG400033541 Solanum tuberosum HOM05D005960 ORTHO05D007537 8.8e-15 85.9 51 88.2
Zm00001eb030310 Zea mays HOM05D005960 ORTHO05D051632 7.2e-09 66.2 38 86.8
Zm00001eb250570 Zea mays HOM05D005960 ORTHO05D051632 1.6e-08 65.1 42 78.6
MCO08G023 Micromonas commoda HOM05D005960 ORTHO05D270145 1.0e-07 62.4 150 28.7


User provided reference genes

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