Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro05662 Vaccinium macrocarpon HOM05D006982 ORTHO05D008909 1.3e-128 463.0 221 100.0
Rhsim10G0045300 Rhododendron simsii HOM05D006982 ORTHO05D008909 2.0e-81 306.2 162 90.1
Dinv11484 Davidia involucrata HOM05D006982 ORTHO05D008909 1.9e-71 273.1 161 78.3
GSVIVG01011493001 Vitis vinifera HOM05D006982 ORTHO05D008909 2.1e-70 269.6 168 73.2
Hma1.2p1_1813F.1_g303760 Hydrangea macrophylla HOM05D006982 ORTHO05D008909 5.2e-69 265.0 157 77.7
Hma1.2p1_3044F.1_g332060 Hydrangea macrophylla HOM05D006982 ORTHO05D008909 5.2e-69 265.0 157 77.7
CANSAT64G0008 Cannabis sativa HOM05D006982 ORTHO05D008909 1.1e-68 263.8 164 74.4
SGA_v2.0_scaffold4G02409 Striga asiatica HOM05D006982 ORTHO05D008909 3.3e-68 262.3 159 73.0
MSTRG.3019 Avicennia marina HOM05D006982 ORTHO05D008909 4.4e-68 261.9 163 75.5
Atru.chr8.390 Acer truncatum HOM05D006982 ORTHO05D008909 1.3e-67 260.4 148 81.8
Duzib187G0332 Durio zibethinus HOM05D006982 ORTHO05D008909 1.3e-67 260.4 173 69.4
Sp2g17880 Schrenkiella parvula HOM05D006982 ORTHO05D008909 1.7e-67 260.0 164 71.3
A06p40000 Brassica napus HOM05D006982 ORTHO05D008909 2.8e-67 259.2 161 73.9
Thhalv10005014m.g Eutrema salsugineum HOM05D006982 ORTHO05D008909 3.7e-67 258.8 164 70.1
Aa31LG2G3980 Aethionema arabicum HOM05D006982 ORTHO05D008909 4.8e-67 258.5 168 69.0
Cc07_g04010 Coffea canephora HOM05D006982 ORTHO05D008909 6.3e-67 258.1 161 74.5
Carub.0005s0799 Capsella rubella HOM05D006982 ORTHO05D008909 8.2e-67 257.7 156 73.1
Migut.H00650 Erythranthe guttata HOM05D006982 ORTHO05D008909 8.2e-67 257.7 163 73.6
Manes.01G098700 Manihot esculenta HOM05D006982 ORTHO05D008909 8.2e-67 257.7 151 78.1
QL02p039506 Quercus lobata HOM05D006982 ORTHO05D008909 8.2e-67 257.7 160 76.2
AL5G19280 Arabidopsis lyrata HOM05D006982 ORTHO05D008909 1.1e-66 257.3 159 71.1
Potri.017G090400 Populus trichocarpa HOM05D006982 ORTHO05D008909 1.4e-66 256.9 164 74.4
Thecc.04G091200 Theobroma cacao HOM05D006982 ORTHO05D008909 1.8e-66 256.5 160 74.4
AT3G29280 Arabidopsis thaliana HOM05D006982 ORTHO05D008909 2.4e-66 256.1 161 69.6
THA.LOC104805498 Tarenaya hassleriana HOM05D006982 ORTHO05D008909 2.4e-66 256.1 167 67.7
Haze_14468 Corylus avellana HOM05D006982 ORTHO05D008909 3.1e-66 255.8 159 74.8
CiPaw.03G091200 Carya illinoinensis HOM05D006982 ORTHO05D008909 4.1e-66 255.4 158 75.3
Glyma.19G027800 Glycine max HOM05D006982 ORTHO05D008909 4.1e-66 255.4 158 73.4
Actinidia07827 Actinidia chinensis HOM05D006982 ORTHO05D008909 5.3e-66 255.0 149 79.2
Sc11g0004740 Simmondsia chinensis HOM05D006982 ORTHO05D008909 7.0e-66 254.6 153 79.1
CsaV3_3G026330 Cucumis sativus L. HOM05D006982 ORTHO05D008909 9.1e-66 254.2 149 77.2
CARHR292480 Cardamine hirsuta HOM05D006982 ORTHO05D008909 1.2e-65 253.8 165 70.3
MELO3C014935.2 Cucumis melo HOM05D006982 ORTHO05D008909 1.2e-65 253.8 149 77.2
Nn4g23351 Nelumbo nucifera HOM05D006982 ORTHO05D008909 1.6e-65 253.4 165 70.9
SalBow1G5236 Salvia bowleyana HOM05D006982 ORTHO05D008909 2.0e-65 253.1 154 73.4
BcaB07g30087 Brassica carinata HOM05D006982 ORTHO05D008909 2.6e-65 252.7 158 72.2
Lj2g0023544 Lotus japonicus HOM05D006982 ORTHO05D008909 4.5e-65 251.9 166 69.3
BcaC03g17569 Brassica carinata HOM05D006982 ORTHO05D008909 5.9e-65 251.5 158 71.5
Aqoxy3G00454 Aquilegia oxysepala HOM05D006982 ORTHO05D008909 7.7e-65 251.1 153 73.9
A02p36510 Brassica napus HOM05D006982 ORTHO05D008909 7.7e-65 251.1 158 70.9
BraA02t08647Z Brassica rapa HOM05D006982 ORTHO05D008909 7.7e-65 251.1 158 70.9
C02p55480 Brassica napus HOM05D006982 ORTHO05D008909 1.0e-64 250.8 166 70.5
TAR629G3328 Trochodendron aralioides HOM05D006982 ORTHO05D008909 1.7e-64 250.0 150 76.0
BolC2t11604H Brassica oleracea HOM05D006982 ORTHO05D008909 2.2e-64 249.6 156 72.4
Eucgr.I01983 Eucalyptus grandis HOM05D006982 ORTHO05D008909 2.2e-64 249.6 162 71.6
BolC7t44339H Brassica oleracea HOM05D006982 ORTHO05D008909 2.9e-64 249.2 161 72.7
ClCG05G014130 Citrullus lanatus HOM05D006982 ORTHO05D008909 2.9e-64 249.2 149 73.8
FAN02G3418 Fragaria x ananassa HOM05D006982 ORTHO05D008909 3.8e-64 248.8 165 72.1
Glyma.13G058700 Glycine max HOM05D006982 ORTHO05D008909 3.8e-64 248.8 159 71.7
PGR004G0184 Punica granatum HOM05D006982 ORTHO05D008909 3.8e-64 248.8 147 75.5
HanXRQChr07g0199461 Helianthus annuus HOM05D006982 ORTHO05D008909 5.0e-64 248.4 148 75.7
RcHm_v2.0_Chr2g0166491 Rosa chinensis HOM05D006982 ORTHO05D008909 5.0e-64 248.4 165 71.5
FvH4_6g47420 Fragaria vesca HOM05D006982 ORTHO05D008909 8.5e-64 247.7 165 70.9
FAN14G3321 Fragaria x ananassa HOM05D006982 ORTHO05D008909 8.5e-64 247.7 165 70.9
Ciclev10012958m.g Citrus clementina HOM05D006982 ORTHO05D008909 1.1e-63 247.3 157 73.9
Gohir.D09G010400 Gossypium hirsutum HOM05D006982 ORTHO05D008909 1.9e-63 246.5 166 69.3
Nitab4.5_0005196g0040 Nicotiana tabacum HOM05D006982 ORTHO05D008909 1.9e-63 246.5 153 76.5
Psat1g070160 Pisum sativum HOM05D006982 ORTHO05D008909 2.5e-63 246.1 167 68.3
RcHm_v2.0_Chr2g0166501 Rosa chinensis HOM05D006982 ORTHO05D008909 3.2e-63 245.7 165 70.9
TPR.G26172 Trifolium pratense HOM05D006982 ORTHO05D008909 4.2e-63 245.4 166 69.9
VMungo0464G0061 Vigna mungo HOM05D006982 ORTHO05D008909 4.2e-63 245.4 161 70.8
Sed0004734 Sechium edule HOM05D006982 ORTHO05D008909 5.5e-63 245.0 151 72.8
ECA238G0675 Erigeron canadensis HOM05D006982 ORTHO05D008909 7.2e-63 244.6 154 70.8
Nitab4.5_0001637g0060 Nicotiana tabacum HOM05D006982 ORTHO05D008909 7.2e-63 244.6 157 73.9
TWI60G0050 Tripterygium wilfordii HOM05D006982 ORTHO05D008909 9.4e-63 244.2 161 73.3
Gorai.006G012000 Gossypium raimondii HOM05D006982 ORTHO05D008909 1.6e-62 243.4 165 68.5
MD09G1061600 Malus domestica HOM05D006982 ORTHO05D008909 1.6e-62 243.4 162 70.4
Phvul.004G033900 Phaseolus vulgaris HOM05D006982 ORTHO05D008909 1.6e-62 243.4 161 69.6
FAN09G4389 Fragaria x ananassa HOM05D006982 ORTHO05D008909 2.1e-62 243.0 165 69.7
Zm00001eb011170 Zea mays HOM05D006982 ORTHO05D008909 6.1e-62 241.5 152 69.7
Lsat_1_v5_gn_2_87800 Lactuca sativa HOM05D006982 ORTHO05D008909 1.8e-61 240.0 149 73.8
BraA06t26915Z Brassica rapa HOM05D006982 ORTHO05D008909 3.0e-61 239.2 148 75.0
Solyc03g013250.4 Solanum lycopersicum HOM05D006982 ORTHO05D008909 6.7e-61 238.0 153 71.2
PSO017G1487 Papaver somniferum HOM05D006982 ORTHO05D008909 8.8e-61 237.7 151 74.2
Sopen03g016600 Solanum pennellii HOM05D006982 ORTHO05D008909 8.8e-61 237.7 153 71.2
Cpa.g.sc14.148 Carica papaya HOM05D006982 ORTHO05D008909 1.5e-60 236.9 146 74.0
CAN.G734.5 Capsicum annuum HOM05D006982 ORTHO05D008909 3.3e-60 235.7 158 69.6
Lalb_Chr02g0159031 Lupinus albus HOM05D006982 ORTHO05D008909 5.7e-60 235.0 167 65.9
EL10Ac2g03084 Beta vulgaris HOM05D006982 ORTHO05D008909 1.3e-59 233.8 155 69.7
PSO478G0313 Papaver somniferum HOM05D006982 ORTHO05D008909 1.3e-59 233.8 155 71.6
AUR62042567 Chenopodium quinoa HOM05D006982 ORTHO05D008909 2.2e-59 233.0 169 65.7
Prupe.3G258600 Prunus persica HOM05D006982 ORTHO05D008909 3.7e-59 232.3 179 63.7
Sabra17G0079600 Salix brachista HOM05D006982 ORTHO05D008909 8.2e-59 231.1 205 57.1
Os03g0257000 Oryza sativa ssp. japonica HOM05D006982 ORTHO05D008909 2.4e-58 229.6 155 65.2
ATR0064G116 Amborella trichopoda HOM05D006982 ORTHO05D008909 3.1e-58 229.2 149 69.8
Os03g0209700 Oryza sativa ssp. japonica HOM05D006982 ORTHO05D008909 1.2e-57 227.3 152 66.4
Lj4A116T80 Lonicera japonica HOM05D006982 ORTHO05D008909 6.8e-53 211.5 116 85.3
SEGI_41437 Sequoiadendron giganteum HOM05D006982 ORTHO05D008909 7.5e-52 208.0 153 62.1
Hund13166 Selenicereus undatus HOM05D006982 ORTHO05D008909 2.8e-51 206.1 147 68.7
Gohir.A09G011401 Gossypium hirsutum HOM05D006982 ORTHO05D008909 8.3e-51 204.5 185 57.8
CDE04G2259 Ceratophyllum demersum HOM05D006982 ORTHO05D008909 3.8e-48 195.7 125 70.4
SMO164G0193 Selaginella moellendorffii HOM05D006982 ORTHO05D008909 4.2e-47 192.2 149 57.0
BolC2t11598H Brassica oleracea HOM05D006982 ORTHO05D008909 1.6e-46 190.3 133 65.4
COL.COLO4_21380 Corchorus olitorius HOM05D006982 ORTHO05D008909 1.8e-45 186.8 116 73.3
Medtr6g013815 Medicago truncatula HOM05D006982 ORTHO05D008909 5.2e-45 185.3 124 69.4
Ah.10g031970 Amaranthus hybridus HOM05D006982 ORTHO05D008909 8.8e-45 184.5 173 56.6
Peaxi162Scf00451g00425 Petunia axillaris HOM05D006982 ORTHO05D008909 1.2e-44 184.1 162 59.9
unitig_899.g15159 Utricularia gibba HOM05D006982 ORTHO05D008909 2.6e-44 183.0 151 60.3
Pp3c21_18720 Physcomitrium patens HOM05D006982 ORTHO05D008909 3.7e-43 179.1 157 54.1
C07p38170 Brassica napus HOM05D006982 ORTHO05D008909 3.2e-34 149.4 92 70.7
arahy.Tifrunner.gnm1.ann1.84WVAW Arachis hypogaea HOM05D006982 ORTHO05D008909 2.7e-33 146.4 155 49.0
arahy.Tifrunner.gnm1.ann1.NGZQ86 Arachis hypogaea HOM05D006982 ORTHO05D008909 6.6e-32 141.7 85 71.8
CSS0035536 Camellia sinensis var. sinensis HOM05D006982 ORTHO05D008909 2.5e-31 139.8 77 84.4
FAN05G3993 Fragaria x ananassa HOM05D006982 ORTHO05D008909 7.3e-31 138.3 101 69.3
SHI03750 Sapria himalayana HOM05D000002 ORTHO05D000001 6.8e-29 131.7 92 63.0
C02p55410 Brassica napus HOM05D006982 ORTHO05D008909 3.4e-28 129.4 119 53.8
TPR.G3955 Trifolium pratense HOM05D006982 ORTHO05D008909 1.1e-21 107.8 68 73.5
AUR62018155 Chenopodium quinoa HOM05D006982 ORTHO05D008909 6.8e-13 78.6 50 72.0
CSS0038093 Camellia sinensis var. sinensis HOM05D006982 ORTHO05D008909 2.6e-12 76.6 46 78.3
PGSC0003DMG400033554 Solanum tuberosum HOM05D006982 ORTHO05D008909 3.2e-10 69.7 43 76.7
Lj4A116T81 Lonicera japonica HOM05D006982 ORTHO05D008909 9.2e-10 68.2 43 76.7
AUR62006323 Chenopodium quinoa HOM05D003441 ORTHO05D044017 1.2e-09 67.8 78 46.2
Medtr6g013805 Medicago truncatula HOM05D006982 ORTHO05D008909 3.0e-08 63.2 41 70.7
SHI03749 Sapria himalayana HOM05D006982 ORTHO05D000001 1.5e-07 60.8 32 75.0
TPR.G26213 Trifolium pratense HOM05D006982 ORTHO05D008909 1.6e-06 57.4 47 59.6


User provided reference genes

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