Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro05580 Vaccinium macrocarpon HOM05D002617 ORTHO05D009035 1.2e-247 859.4 427 100.0
Rhsim10G0064400 Rhododendron simsii HOM05D002617 ORTHO05D009035 1.3e-209 733.0 412 88.3
Actinidia36305 Actinidia chinensis HOM05D002617 ORTHO05D009035 2.1e-188 662.5 418 79.4
Dinv33921 Davidia involucrata HOM05D002617 ORTHO05D009035 4.6e-183 644.8 414 75.6
CSS0020455 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D009035 1.1e-176 623.6 427 74.2
Cfa007960 Carpinus fangiana HOM05D002617 ORTHO05D009035 1.5e-165 586.6 413 70.2
TAR629G1601 Trochodendron aralioides HOM05D002617 ORTHO05D009035 1.5e-165 586.6 404 69.3
QL02p053130 Quercus lobata HOM05D002617 ORTHO05D009035 3.1e-163 578.9 415 69.2
Prupe.3G241200 Prunus persica HOM05D002617 ORTHO05D009035 1.7e-161 573.2 413 65.9
Duzib151G0578 Durio zibethinus HOM05D002617 ORTHO05D009035 8.8e-158 560.8 416 66.3
Nn3g17671 Nelumbo nucifera HOM05D002617 ORTHO05D009035 5.7e-157 558.1 418 64.4
Cfa007963 Carpinus fangiana HOM05D002617 ORTHO05D009035 1.1e-155 553.9 429 66.7
Thecc.04G140600 Theobroma cacao HOM05D002617 ORTHO05D009035 3.1e-155 552.4 418 65.8
Gohir.D10G126600 Gossypium hirsutum HOM05D002617 ORTHO05D009035 1.2e-154 550.4 397 67.3
COL.COLO4_16208 Corchorus olitorius HOM05D002617 ORTHO05D009035 5.9e-154 548.1 413 64.6
DCAR_011250 Daucus carota HOM05D002617 ORTHO05D009035 2.2e-153 546.2 409 66.0
Lj4A130G15 Lonicera japonica HOM05D002617 ORTHO05D009035 2.2e-153 546.2 385 69.6
Hma1.2p1_0136F.1_g062000 Hydrangea macrophylla HOM05D002617 ORTHO05D009035 8.5e-153 544.3 349 75.4
MD09G1082500 Malus domestica HOM05D002617 ORTHO05D009035 3.2e-152 542.3 384 66.9
FvH4_6g45490 Fragaria vesca HOM05D002617 ORTHO05D009035 4.2e-152 542.0 382 66.5
Peaxi162Scf00479g00211 Petunia axillaris HOM05D002617 ORTHO05D009035 1.2e-151 540.4 385 64.2
Sopen03g009540 Solanum pennellii HOM05D002617 ORTHO05D009035 2.3e-150 536.2 387 65.1
FAN05G4565 Fragaria x ananassa HOM05D002617 ORTHO05D009035 3.0e-150 535.8 382 66.0
RcHm_v2.0_Chr2g0163431 Rosa chinensis HOM05D002617 ORTHO05D009035 3.9e-150 535.4 412 63.1
TWI53G1449 Tripterygium wilfordii HOM05D002617 ORTHO05D009035 2.6e-149 532.7 405 64.0
Medtr6g016985 Medicago truncatula HOM05D002617 ORTHO05D009035 2.8e-148 529.3 372 65.9
Aqoxy3G00430 Aquilegia oxysepala HOM05D002617 ORTHO05D009035 2.4e-147 526.2 381 65.1
Psat1g062120 Pisum sativum HOM05D002617 ORTHO05D009035 2.4e-147 526.2 368 64.9
Atru.chr8.789 Acer truncatum HOM05D002617 ORTHO05D009035 7.0e-147 524.6 408 63.0
Cc07_g05000 Coffea canephora HOM05D002617 ORTHO05D009035 2.0e-146 523.1 414 62.3
Gohir.A10G140200 Gossypium hirsutum HOM05D002617 ORTHO05D009035 3.5e-146 522.3 397 65.0
Nitab4.5_0000612g0170 Nicotiana tabacum HOM05D002617 ORTHO05D009035 1.0e-145 520.8 436 59.6
TPR.G9672 Trifolium pratense HOM05D002617 ORTHO05D009035 1.0e-145 520.8 368 65.2
Gorai.011G139500 Gossypium raimondii HOM05D002617 ORTHO05D009035 1.3e-145 520.4 397 64.7
Sabra04G0077100 Salix brachista HOM05D002617 ORTHO05D009035 6.5e-145 518.1 368 67.7
Lj2g0019105 Lotus japonicus HOM05D002617 ORTHO05D009035 8.5e-145 517.7 369 64.5
PSO478G1567 Papaver somniferum HOM05D002617 ORTHO05D009035 2.1e-143 513.1 411 61.1
PSO832G3224 Papaver somniferum HOM05D002617 ORTHO05D009035 6.1e-143 511.5 378 64.0
PGR042G2862 Punica granatum HOM05D002617 ORTHO05D009035 1.0e-142 510.8 415 62.2
Phvul.005G010600 Phaseolus vulgaris HOM05D002617 ORTHO05D009035 7.5e-141 504.6 369 64.0
Nitab4.5_0003461g0060 Nicotiana tabacum HOM05D002617 ORTHO05D009035 5.3e-139 498.4 443 56.2
EL10Ac2g04621 Beta vulgaris HOM05D002617 ORTHO05D009035 2.2e-137 493.0 381 62.2
Cpa.g.sc179.39 Carica papaya HOM05D002617 ORTHO05D009035 5.0e-137 491.9 366 64.8
AUR62014551 Chenopodium quinoa HOM05D002617 ORTHO05D009035 8.5e-137 491.1 378 62.2
FAN14G1977 Fragaria x ananassa HOM05D002617 ORTHO05D009035 4.2e-136 488.8 388 62.1
AUR62008950 Chenopodium quinoa HOM05D002617 ORTHO05D009035 9.4e-136 487.6 382 61.0
MBI16_g23736_MAGBIO Magnolia biondii HOM05D002617 ORTHO05D009035 1.2e-135 487.3 422 55.0
arahy.Tifrunner.gnm1.ann1.7SH6PF Arachis hypogaea HOM05D002617 ORTHO05D009035 8.8e-134 481.1 378 60.6
Actinidia18118 Actinidia chinensis HOM05D002617 ORTHO05D009035 1.2e-133 480.7 294 78.2
HPP92_020267 Vanilla planifolia HOM05D002617 ORTHO05D009035 1.5e-133 480.3 369 60.4
SGA_v2.0_scaffold150G36618 Striga asiatica HOM05D002617 ORTHO05D009035 9.8e-133 477.6 391 60.9
CiPaw.09G147400 Carya illinoinensis HOM05D002617 ORTHO05D009035 3.7e-132 475.7 326 71.5
Glyma.14G157500 Glycine max HOM05D002617 ORTHO05D009035 8.3e-132 474.6 339 66.4
GSVIVG01036455001 Vitis vinifera HOM05D002617 ORTHO05D009035 8.3e-132 474.6 307 73.6
Glyma.13G047800 Glycine max HOM05D002617 ORTHO05D009035 1.0e-129 467.6 336 65.5
Eucgr.J01458 Eucalyptus grandis HOM05D002617 ORTHO05D009035 1.5e-128 463.8 412 55.1
Oeu043862.1 Olea europaea HOM05D002617 ORTHO05D009035 4.0e-126 455.7 379 58.8
THA.LOC104827464 Tarenaya hassleriana HOM05D002617 ORTHO05D009035 1.1e-123 447.6 383 57.7
arahy.Tifrunner.gnm1.ann1.37DWZ9 Arachis hypogaea HOM05D002617 ORTHO05D009035 6.6e-121 438.3 368 57.6
Lsat_1_v5_gn_2_86600 Lactuca sativa HOM05D002617 ORTHO05D009035 5.2e-118 428.7 379 54.9
Lalb_Chr10g0092311 Lupinus albus HOM05D002617 ORTHO05D009035 1.3e-116 424.1 334 60.8
FAN02G3888 Fragaria x ananassa HOM05D002617 ORTHO05D009035 1.7e-116 423.7 298 65.4
Ciclev10013582m.g Citrus clementina HOM05D002617 ORTHO05D009035 2.2e-116 423.3 300 67.3
Ca_14082_v3 Cicer arietinum L. HOM05D002617 ORTHO05D009035 1.1e-115 421.0 300 65.7
Haze_14108 Corylus avellana HOM05D002617 ORTHO05D009035 1.4e-115 420.6 355 62.0
CANSAT56G0222 Cannabis sativa HOM05D002617 ORTHO05D009035 6.0e-114 415.2 332 62.7
AT5G16020 Arabidopsis thaliana HOM05D002617 ORTHO05D009035 1.3e-113 414.1 380 55.8
Thhalv10015867m.g Eutrema salsugineum HOM05D002617 ORTHO05D009035 1.7e-113 413.7 401 52.4
Sc11g0008110 Simmondsia chinensis HOM05D002617 ORTHO05D009035 1.7e-113 413.7 319 61.1
CARHR197300 Cardamine hirsuta HOM05D002617 ORTHO05D009035 3.0e-113 412.9 380 55.3
AL6G26890 Arabidopsis lyrata HOM05D002617 ORTHO05D009035 1.9e-112 410.2 380 54.5
FAN09G3897 Fragaria x ananassa HOM05D002617 ORTHO05D009035 9.5e-112 407.9 377 54.6
BcaB08g36879 Brassica carinata HOM05D002617 ORTHO05D009035 8.0e-111 404.8 375 54.7
Carub.0006s1420 Capsella rubella HOM05D002617 ORTHO05D009035 3.1e-110 402.9 415 50.6
A10p23040 Brassica napus HOM05D002617 ORTHO05D009035 1.2e-109 401.0 376 54.5
BraA10t44373Z Brassica rapa HOM05D002617 ORTHO05D009035 1.2e-109 401.0 376 54.5
HanXRQChr14g0452391 Helianthus annuus HOM05D002617 ORTHO05D009035 7.5e-109 398.3 369 53.4
Ah.06g191010 Amaranthus hybridus HOM05D002617 ORTHO05D009035 1.7e-108 397.1 317 60.9
Aa31LG11G13590 Aethionema arabicum HOM05D002617 ORTHO05D009035 4.9e-108 395.6 409 49.4
ECA238G3370 Erigeron canadensis HOM05D002617 ORTHO05D009035 1.4e-107 394.0 313 60.4
C09p61030 Brassica napus HOM05D002617 ORTHO05D009035 7.0e-107 391.7 375 54.4
BolC9t58948H Brassica oleracea HOM05D002617 ORTHO05D009035 2.1e-106 390.2 375 54.1
Zm00001eb161540 Zea mays HOM05D002617 ORTHO05D009035 4.6e-106 389.0 378 48.4
Ah.06g191000 Amaranthus hybridus HOM05D002617 ORTHO05D009035 8.6e-105 384.8 317 59.6
SHI30168 Sapria himalayana HOM05D002617 ORTHO05D009035 1.1e-104 384.4 316 60.8
Migut.H00535 Erythranthe guttata HOM05D002617 ORTHO05D009035 7.5e-101 371.7 308 61.0
Manes.02G065900 Manihot esculenta HOM05D002617 ORTHO05D009035 2.3e-97 360.1 236 72.9
Potri.004G104500 Populus trichocarpa HOM05D002617 ORTHO05D009035 2.5e-96 356.7 251 68.1
CANSAT56G4171 Cannabis sativa HOM05D002617 ORTHO05D009035 1.6e-95 354.0 278 62.2
PSO013G0088 Papaver somniferum HOM05D002617 ORTHO05D009035 3.4e-93 346.3 252 65.1
ATR0820G227 Amborella trichopoda HOM05D002617 ORTHO05D009035 3.8e-92 342.8 316 51.6
Os01g0605400 Oryza sativa ssp. japonica HOM05D002617 ORTHO05D009035 3.3e-88 329.7 373 45.6
BcaC04g18915 Brassica carinata HOM05D002617 ORTHO05D009035 4.0e-86 322.8 334 53.0
CiPaw.09G147200 Carya illinoinensis HOM05D002617 ORTHO05D009035 5.8e-85 318.9 236 66.1
unitig_899.g15127 Utricularia gibba HOM05D002617 ORTHO05D009035 3.5e-82 309.7 319 50.8
CAN.G153.15 Capsicum annuum HOM05D002617 ORTHO05D009035 1.0e-81 308.1 317 50.5
PGSC0003DMG400018767 Solanum tuberosum HOM05D002617 ORTHO05D009035 1.5e-72 277.7 287 49.5
CDE06G1275 Ceratophyllum demersum HOM05D002617 ORTHO05D009035 2.0e-61 240.7 177 59.3
Solyc03g045080.3 Solanum lycopersicum HOM05D002617 ORTHO05D009035 1.7e-60 237.7 172 66.3
SalBow1G3878 Salvia bowleyana HOM05D002617 ORTHO05D009035 2.2e-52 210.7 186 57.5
SMO116G0487 Selaginella moellendorffii HOM05D002617 ORTHO05D009035 1.8e-33 147.9 259 31.3
CBR_g48653 Chara braunii HOM05D001394 ORTHO05D001237 1.1e-27 128.6 262 30.5
FAN02G3008 Fragaria x ananassa HOM05D002617 ORTHO05D009035 1.7e-20 104.8 76 69.7
TAR705G0001 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.0e-16 91.3 59 67.8
Lalb_Chr10g0092301 Lupinus albus HOM05D002617 ORTHO05D009035 2.4e-14 84.3 67 50.7
CANSAT56G3033 Cannabis sativa HOM05D002617 ORTHO05D009035 1.4e-09 68.6 93 45.2
TAR629G1810 Trochodendron aralioides HOM05D004423 ORTHO05D005464 4.0e-09 67.0 42 64.3
TAR629G3114 Trochodendron aralioides HOM05D004526 ORTHO05D002794 1.8e-06 58.2 37 67.6


User provided reference genes

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