Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro05569 Vaccinium macrocarpon HOM05D007149 ORTHO05D008956 9.0e-44 179.9 91 100.0
Solyc02g063085.1 Solanum lycopersicum HOM05D007149 ORTHO05D008956 1.9e-38 162.2 88 88.6
Manes.01G108800 Manihot esculenta HOM05D007149 ORTHO05D008956 2.5e-38 161.8 88 89.8
Actinidia15873 Actinidia chinensis HOM05D007149 ORTHO05D008956 5.6e-38 160.6 88 87.5
Actinidia36312 Actinidia chinensis HOM05D007149 ORTHO05D008956 5.6e-38 160.6 88 88.6
Peaxi162Scf00501g00121 Petunia axillaris HOM05D007149 ORTHO05D008956 7.4e-38 160.2 86 89.5
Nn4g23775 Nelumbo nucifera HOM05D007149 ORTHO05D008956 9.6e-38 159.8 88 87.5
Cfa007939 Carpinus fangiana HOM05D007149 ORTHO05D008956 1.6e-37 159.1 88 88.6
Hma1.2p1_0550F.1_g177300 Hydrangea macrophylla HOM05D007149 ORTHO05D008956 2.8e-37 158.3 88 87.5
CSS0003707 Camellia sinensis var. sinensis HOM05D007149 ORTHO05D008956 4.8e-37 157.5 88 85.2
ATR0665G039 Amborella trichopoda HOM05D007149 ORTHO05D008956 1.1e-36 156.4 88 87.5
Ca_13737_v3 Cicer arietinum L. HOM05D007149 ORTHO05D008956 1.4e-36 156.0 86 88.4
Dinv34841 Davidia involucrata HOM05D007149 ORTHO05D008956 1.4e-36 156.0 88 86.4
CSS0003918 Camellia sinensis var. sinensis HOM05D007149 ORTHO05D008956 1.8e-36 155.6 88 84.1
CAN.G953.15 Capsicum annuum HOM05D007149 ORTHO05D008956 2.4e-36 155.2 88 83.0
CiPaw.04G040600 Carya illinoinensis HOM05D007149 ORTHO05D008956 2.4e-36 155.2 88 86.4
Cc07_g08920 Coffea canephora HOM05D007149 ORTHO05D008956 3.1e-36 154.8 88 86.4
Ciclev10013207m.g Citrus clementina HOM05D007149 ORTHO05D008956 5.3e-36 154.1 88 85.2
Sabra17G0093700 Salix brachista HOM05D007149 ORTHO05D008956 6.9e-36 153.7 88 83.0
Hund13727 Selenicereus undatus HOM05D007149 ORTHO05D008956 1.2e-35 152.9 88 83.0
CANSAT64G1005 Cannabis sativa HOM05D007149 ORTHO05D008956 1.5e-35 152.5 88 81.8
CDE11G0018 Ceratophyllum demersum HOM05D007149 ORTHO05D008956 1.5e-35 152.5 88 83.0
Lalb_Chr04g0257361 Lupinus albus HOM05D007149 ORTHO05D008956 1.5e-35 152.5 85 87.1
HPP92_011090 Vanilla planifolia HOM05D007149 ORTHO05D008956 1.5e-35 152.5 88 84.1
COL.COLO4_16183 Corchorus olitorius HOM05D007149 ORTHO05D008956 2.0e-35 152.1 88 81.8
Lj2g0020616 Lotus japonicus HOM05D007149 ORTHO05D008956 2.0e-35 152.1 85 84.7
Thecc.04G136400 Theobroma cacao HOM05D007149 ORTHO05D008956 2.0e-35 152.1 88 80.7
Aqoxy3G03934 Aquilegia oxysepala HOM05D007149 ORTHO05D008956 2.6e-35 151.8 88 85.2
Cpa.g.sc179.16 Carica papaya HOM05D007149 ORTHO05D008956 2.6e-35 151.8 88 81.8
TWI74G0718 Tripterygium wilfordii HOM05D007149 ORTHO05D008956 2.6e-35 151.8 88 80.7
Ah.10g037580 Amaranthus hybridus HOM05D007149 ORTHO05D008956 3.4e-35 151.4 88 83.0
Gohir.A07G071500 Gossypium hirsutum HOM05D007149 ORTHO05D008956 3.4e-35 151.4 88 79.5
Gohir.D07G076000 Gossypium hirsutum HOM05D007149 ORTHO05D008956 3.4e-35 151.4 88 79.5
Gorai.001G080200 Gossypium raimondii HOM05D007149 ORTHO05D008956 3.4e-35 151.4 88 79.5
Os03g0257900 Oryza sativa ssp. japonica HOM05D007149 ORTHO05D008956 3.4e-35 151.4 88 83.0
Phvul.004G064400 Phaseolus vulgaris HOM05D007149 ORTHO05D008956 3.4e-35 151.4 87 81.6
Zm00001eb011230 Zea mays HOM05D007149 ORTHO05D008956 3.4e-35 151.4 88 83.0
QL02p051591 Quercus lobata HOM05D007149 ORTHO05D008956 7.6e-35 150.2 88 84.1
DCAR_017207 Daucus carota HOM05D007149 ORTHO05D008956 1.3e-34 149.4 86 82.6
PGR004G0481 Punica granatum HOM05D007149 ORTHO05D008956 1.7e-34 149.1 85 82.4
Sc11g0008240 Simmondsia chinensis HOM05D007149 ORTHO05D008956 1.7e-34 149.1 84 84.5
CiPaw.03G060400 Carya illinoinensis HOM05D007149 ORTHO05D008956 2.2e-34 148.7 88 81.8
Glyma.19G046200 Glycine max HOM05D007149 ORTHO05D008956 2.2e-34 148.7 85 82.4
Potri.017G113401 Populus trichocarpa HOM05D007149 ORTHO05D008956 2.2e-34 148.7 88 79.5
Lsat_1_v5_gn_3_78860 Lactuca sativa HOM05D007149 ORTHO05D008956 2.9e-34 148.3 88 81.8
Migut.H00206 Erythranthe guttata HOM05D007149 ORTHO05D008956 3.8e-34 147.9 88 80.7
Eucgr.J01478 Eucalyptus grandis HOM05D007149 ORTHO05D008956 6.4e-34 147.1 88 81.8
MD07G1095900 Malus domestica HOM05D007149 ORTHO05D008956 1.4e-33 146.0 89 78.7
MD17G1105000 Malus domestica HOM05D007149 ORTHO05D008956 1.4e-33 146.0 88 78.4
Atru.chr8.867 Acer truncatum HOM05D007149 ORTHO05D008956 1.9e-33 145.6 88 80.7
EL10Ac2g04594 Beta vulgaris HOM05D007149 ORTHO05D008956 1.9e-33 145.6 86 80.2
THA.LOC104803005 Tarenaya hassleriana HOM05D007149 ORTHO05D008956 1.9e-33 145.6 88 79.5
unitig_899.g14509 Utricularia gibba HOM05D007149 ORTHO05D008956 1.9e-33 145.6 88 80.7
PSO782G5258 Papaver somniferum HOM05D007149 ORTHO05D008956 2.4e-33 145.2 86 81.4
FvH4_6g45250 Fragaria vesca HOM05D007149 ORTHO05D008956 3.2e-33 144.8 88 76.1
FAN09G4869 Fragaria x ananassa HOM05D007149 ORTHO05D008956 3.2e-33 144.8 88 76.1
FAN14G5255 Fragaria x ananassa HOM05D007149 ORTHO05D008956 3.2e-33 144.8 88 76.1
Aa31LG11G13550 Aethionema arabicum HOM05D007149 ORTHO05D008956 4.2e-33 144.4 87 77.0
THA.LOC104827153 Tarenaya hassleriana HOM05D007149 ORTHO05D008956 4.2e-33 144.4 86 79.1
RcHm_v2.0_Chr2g0162971 Rosa chinensis HOM05D007149 ORTHO05D008956 5.5e-33 144.1 88 76.1
Medtr0024s0060 Medicago truncatula HOM05D007149 ORTHO05D008956 7.1e-33 143.7 84 84.5
CsaV3_5G039180 Cucumis sativus L. HOM05D007149 ORTHO05D008956 1.2e-32 142.9 88 78.4
HanXRQChr12g0376461 Helianthus annuus HOM05D007149 ORTHO05D008956 2.1e-32 142.1 88 77.3
PSO063G3907 Papaver somniferum HOM05D007149 ORTHO05D008956 2.1e-32 142.1 86 80.2
Sp6g28070 Schrenkiella parvula HOM05D007149 ORTHO05D008956 3.5e-32 141.4 87 78.2
Psat1g079040 Pisum sativum HOM05D007149 ORTHO05D008956 4.6e-32 141.0 85 80.0
GSVIVG01031069001 Vitis vinifera HOM05D007149 ORTHO05D008956 7.9e-32 140.2 88 73.9
MELO3C022093.2 Cucumis melo HOM05D007149 ORTHO05D008956 1.0e-31 139.8 88 77.3
Thhalv10015129m.g Eutrema salsugineum HOM05D007149 ORTHO05D008956 1.0e-31 139.8 87 77.0
Carub.0006s1425 Capsella rubella HOM05D007149 ORTHO05D008956 1.3e-31 139.4 87 77.0
A10p23000 Brassica napus HOM05D007149 ORTHO05D008956 1.8e-31 139.0 87 75.9
BraA10t44369Z Brassica rapa HOM05D007149 ORTHO05D008956 1.8e-31 139.0 87 75.9
CARHR197250 Cardamine hirsuta HOM05D007149 ORTHO05D008956 1.8e-31 139.0 87 74.7
AL6G26940 Arabidopsis lyrata HOM05D007149 ORTHO05D008956 2.3e-31 138.7 87 75.9
BcaC04g18912 Brassica carinata HOM05D007149 ORTHO05D008956 2.3e-31 138.7 87 74.7
C09p60970 Brassica napus HOM05D007149 ORTHO05D008956 2.3e-31 138.7 87 74.7
BolC9t58944H Brassica oleracea HOM05D007149 ORTHO05D008956 2.3e-31 138.7 87 74.7
Sed0025185 Sechium edule HOM05D007149 ORTHO05D008956 5.1e-31 137.5 89 74.2
AT5G16060 Arabidopsis thaliana HOM05D007149 ORTHO05D008956 6.7e-31 137.1 87 73.6
BcaB08g36883 Brassica carinata HOM05D007149 ORTHO05D008956 8.7e-31 136.7 87 74.7
FAN09G3419 Fragaria x ananassa HOM05D007149 ORTHO05D008956 1.1e-30 136.3 99 67.7
Duzib133G0440 Durio zibethinus HOM05D007149 ORTHO05D008956 9.6e-30 133.3 126 56.3
Haze_14138 Corylus avellana HOM05D007149 ORTHO05D008956 2.8e-29 131.7 69 91.3
FAN02G3200 Fragaria x ananassa HOM05D007149 ORTHO05D008956 4.8e-29 131.0 100 64.0
PGSC0003DMG400024179 Solanum tuberosum HOM05D007149 ORTHO05D008956 4.8e-29 131.0 72 84.7
Nn3g17784 Nelumbo nucifera HOM05D007149 ORTHO05D008956 1.1e-28 129.8 72 84.7
CDE05G2183 Ceratophyllum demersum HOM05D007149 ORTHO05D008956 7.6e-27 123.6 67 88.1
Nitab4.5_0001569g0020 Nicotiana tabacum HOM05D007149 ORTHO05D008956 1.7e-26 122.5 69 84.1
SalBow3G3356 Salvia bowleyana HOM05D007149 ORTHO05D008956 1.7e-26 122.5 68 86.8
Sopen02g014160 Solanum pennellii HOM05D007149 ORTHO05D008956 2.2e-26 122.1 65 86.2
HPP92_011107 Vanilla planifolia HOM05D007149 ORTHO05D008956 2.9e-26 121.7 71 81.7
arahy.Tifrunner.gnm1.ann1.2T9F1Z Arachis hypogaea HOM05D007149 ORTHO05D008956 6.5e-26 120.6 72 79.2
arahy.Tifrunner.gnm1.ann1.HVR4ZG Arachis hypogaea HOM05D007149 ORTHO05D008956 6.5e-26 120.6 72 79.2
Aa31LG2G17140 Aethionema arabicum HOM05D007149 ORTHO05D008956 4.2e-25 117.9 71 74.6
SHI30170 Sapria himalayana HOM05D007149 ORTHO05D008956 5.5e-25 117.5 67 79.1
TPR.G32450 Trifolium pratense HOM05D007149 ORTHO05D008956 4.6e-24 114.4 136 50.0
ClCG11G005400 Citrullus lanatus HOM05D007149 ORTHO05D008956 6.0e-24 114.0 66 83.3
AagrBONN_evm.TU.Sc2ySwM_228.1220 Anthoceros agrestis HOM05D007149 ORTHO05D008956 7.9e-24 113.6 85 62.4
Carub.0055s0008 Capsella rubella HOM05D007149 ORTHO05D008956 6.7e-23 110.5 65 81.5
SalBow6G3599 Salvia bowleyana HOM05D007149 ORTHO05D008956 8.7e-23 110.2 65 80.0
AUR62014527 Chenopodium quinoa HOM05D007149 ORTHO05D008956 1.5e-22 109.4 65 78.5
Prupe.3G238900 Prunus persica HOM05D007149 ORTHO05D008956 7.4e-22 107.1 66 75.8
Pp3c20_17910 Physcomitrium patens HOM05D007149 ORTHO05D008956 2.2e-21 105.5 81 61.7
ECA246G4376 Erigeron canadensis HOM05D007149 ORTHO05D008956 3.7e-21 104.8 65 73.8
SMO356G0237 Selaginella moellendorffii HOM05D007149 ORTHO05D008956 1.5e-19 99.4 75 62.7
Mapoly0073s0075 Marchantia polymorpha HOM05D007149 ORTHO05D008956 4.6e-16 87.8 65 61.5
SGA_v2.0_scaffold33G13472 Striga asiatica HOM05D007149 ORTHO05D008956 6.1e-16 87.4 45 86.7
RcHm_v2.0_Chr2g0163021 Rosa chinensis HOM05D007149 ORTHO05D008956 6.7e-15 84.0 67 62.7
Nitab4.5_0002288g0070 Nicotiana tabacum HOM05D007149 ORTHO05D008956 1.7e-13 79.3 88 53.4
MCO15G246 Micromonas commoda HOM05D007149 ORTHO05D008956 1.0e-10 70.1 68 47.1
PRCOL_00003753 Prasinoderma coloniale HOM05D007149 ORTHO05D008956 2.9e-10 68.6 70 50.0


User provided reference genes

Program Settings