Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro05531 Vaccinium macrocarpon HOM05D000260 ORTHO05D000318 1.3e-85 319.7 169 100.0
vmacro05530 Vaccinium macrocarpon HOM05D000260 ORTHO05D000318 9.8e-36 154.1 147 52.4
vmacro09588 Vaccinium macrocarpon HOM05D000013 ORTHO05D000011 1.3e-32 143.7 124 56.5
Rhsim10G0069600 Rhododendron simsii HOM05D000260 ORTHO05D000318 1.9e-26 123.2 148 50.7
Actinidia36338 Actinidia chinensis HOM05D000260 ORTHO05D000318 1.8e-21 106.7 99 51.5
Lj4C188T2 Lonicera japonica HOM05D000260 ORTHO05D000318 3.0e-16 89.4 136 40.4
Lj4C190G2 Lonicera japonica HOM05D000260 ORTHO05D000318 5.1e-16 88.6 136 39.7
Actinidia17644 Actinidia chinensis HOM05D000260 ORTHO05D000318 1.1e-15 87.4 125 41.6
Dinv34805 Davidia involucrata HOM05D000260 ORTHO05D000318 1.1e-15 87.4 89 52.8
Actinidia17645 Actinidia chinensis HOM05D000260 ORTHO05D000318 8.1e-14 81.3 126 39.7
Rhsim08G0091700 Rhododendron simsii HOM05D000072 ORTHO05D000026 3.1e-13 79.3 130 36.9
Oeu010771.2 Olea europaea HOM05D000260 ORTHO05D000318 5.2e-13 78.6 137 36.5
Eucgr.F02516 Eucalyptus grandis HOM05D000072 ORTHO05D000026 1.2e-12 77.4 140 32.9
Oeu016632.1 Olea europaea HOM05D000072 ORTHO05D000026 3.4e-12 75.9 148 36.5
Eucgr.L03194 Eucalyptus grandis HOM05D000260 ORTHO05D000318 7.5e-12 74.7 134 34.3
Lj5C154G20 Lonicera japonica HOM05D000072 ORTHO05D000026 7.5e-12 74.7 141 32.6
Dinv34807 Davidia involucrata HOM05D000072 ORTHO05D000026 3.7e-11 72.4 137 35.0
VMungo1383G2565 Vigna mungo HOM05D000260 ORTHO05D013008 4.9e-11 72.0 129 33.3
Lj2C440G9 Lonicera japonica HOM05D000072 ORTHO05D000026 1.4e-10 70.5 133 37.6
Medtr7g082533 Medicago truncatula HOM05D000260 ORTHO05D000318 1.4e-10 70.5 135 31.9
TWI74G0852 Tripterygium wilfordii HOM05D000260 ORTHO05D000318 1.4e-10 70.5 91 38.5
FAN15G2298 Fragaria x ananassa HOM05D000260 ORTHO05D000318 2.4e-10 69.7 117 36.8
Gorai.008G056600 Gossypium raimondii HOM05D000260 ORTHO05D000318 2.4e-10 69.7 141 31.2
MD00G1204100 Malus domestica HOM05D000260 ORTHO05D000318 2.4e-10 69.7 106 35.8
Lj2C440G3 Lonicera japonica HOM05D000072 ORTHO05D000318 3.2e-10 69.3 137 36.5
Manes.02G070200 Manihot esculenta HOM05D000072 ORTHO05D000026 3.2e-10 69.3 125 31.2
Rhsim08G0083500 Rhododendron simsii HOM05D000260 ORTHO05D000318 3.2e-10 69.3 134 34.3
RcHm_v2.0_Chr6g0273031 Rosa chinensis HOM05D000260 ORTHO05D000318 3.2e-10 69.3 119 37.0
Oeu016631.1 Olea europaea HOM05D000072 ORTHO05D000026 4.1e-10 68.9 143 33.6
Eucgr.F02517 Eucalyptus grandis HOM05D000260 ORTHO05D000318 5.4e-10 68.6 138 31.9
Eucgr.F02104 Eucalyptus grandis HOM05D000260 ORTHO05D000318 9.2e-10 67.8 144 33.3
Prupe.3G146600 Prunus persica HOM05D000260 ORTHO05D000318 9.2e-10 67.8 136 31.6
Sopen02g030960 Solanum pennellii HOM05D000260 ORTHO05D000318 9.2e-10 67.8 145 31.7
RcHm_v2.0_Chr6g0264401 Rosa chinensis HOM05D000260 ORTHO05D000318 1.2e-09 67.4 136 33.1
Thecc.07G123600 Theobroma cacao HOM05D000072 ORTHO05D000026 1.2e-09 67.4 141 30.5
vmacro18066 Vaccinium macrocarpon HOM05D000260 ORTHO05D000318 1.2e-09 67.4 146 30.8
Dinv33960 Davidia involucrata HOM05D000260 ORTHO05D000318 1.6e-09 67.0 87 42.5
Eucgr.F02509 Eucalyptus grandis HOM05D000072 ORTHO05D000026 1.6e-09 67.0 133 32.3
Prupe.3G145800 Prunus persica HOM05D000072 ORTHO05D000026 1.6e-09 67.0 136 31.6
Eucgr.F02102 Eucalyptus grandis HOM05D000260 ORTHO05D000318 2.1e-09 66.6 137 32.1
Gohir.D12G053400 Gossypium hirsutum HOM05D000260 ORTHO05D000318 2.7e-09 66.2 138 30.4
Lj2A439G34 Lonicera japonica HOM05D000260 ORTHO05D000318 3.5e-09 65.9 139 35.3
Lj9C529G2 Lonicera japonica HOM05D000260 ORTHO05D000318 3.5e-09 65.9 139 35.3
Oeu036851.1 Olea europaea HOM05D000260 ORTHO05D000318 3.5e-09 65.9 94 38.3
Cc07_g08650 Coffea canephora HOM05D000072 ORTHO05D000026 6.0e-09 65.1 90 38.9
Potri.004G096900 Populus trichocarpa HOM05D000260 ORTHO05D000318 7.8e-09 64.7 131 31.3
CSS0025610 Camellia sinensis var. sinensis HOM05D000260 ORTHO05D000318 1.0e-08 64.3 151 30.5
CSS0044319 Camellia sinensis var. sinensis HOM05D000260 ORTHO05D000318 1.0e-08 64.3 113 33.6
MD09G1255100 Malus domestica HOM05D000260 ORTHO05D000318 1.0e-08 64.3 77 41.6
ClCG11G007790 Citrullus lanatus HOM05D000260 ORTHO05D000318 1.3e-08 63.9 130 32.3
CsaV3_2G033790 Cucumis sativus L. HOM05D000260 ORTHO05D000318 1.3e-08 63.9 130 30.8
Prupe.1G497000 Prunus persica HOM05D000260 ORTHO05D000318 1.3e-08 63.9 79 41.8
CAN.G625.38 Capsicum annuum HOM05D000072 ORTHO05D000026 1.7e-08 63.5 143 32.2
MD17G1247800 Malus domestica HOM05D000260 ORTHO05D000318 2.3e-08 63.2 144 29.9
AL1G30800 Arabidopsis lyrata HOM05D000260 ORTHO05D000318 3.0e-08 62.8 66 45.5
Lj5A152G71 Lonicera japonica HOM05D000260 ORTHO05D000318 3.0e-08 62.8 137 30.7
Nitab4.5_0003652g0020 Nicotiana tabacum HOM05D000260 ORTHO05D000318 3.0e-08 62.8 101 32.7
Rhsim12G0142700 Rhododendron simsii HOM05D000260 ORTHO05D000318 3.0e-08 62.8 134 33.6
Sp1g16340 Schrenkiella parvula HOM05D000260 ORTHO05D000318 3.0e-08 62.8 64 45.3
EL10Ac2g04539 Beta vulgaris HOM05D000072 ORTHO05D000026 8.6e-08 61.2 93 34.4
Hund16172 Selenicereus undatus HOM05D000260 ORTHO05D000318 8.6e-08 61.2 80 40.0
Atru.chr1.1005 Acer truncatum HOM05D000072 ORTHO05D000026 1.1e-07 60.8 59 45.8
Potri.017G117340 Populus trichocarpa HOM05D000072 ORTHO05D000026 1.5e-07 60.5 134 26.1
Haze_14182 Corylus avellana HOM05D000260 ORTHO05D000318 1.9e-07 60.1 138 27.5
TAR371G0639 Trochodendron aralioides HOM05D000072 ORTHO05D000026 1.9e-07 60.1 140 31.4
Ca_08086_v3 Cicer arietinum L. HOM05D000260 ORTHO05D000318 2.5e-07 59.7 100 34.0
Haze_18709 Corylus avellana HOM05D000072 ORTHO05D000026 2.5e-07 59.7 97 34.0
COL.COLO4_09357 Corchorus olitorius HOM05D000464 ORTHO05D000408 3.3e-07 59.3 132 31.1
Potri.004G096675 Populus trichocarpa HOM05D000260 ORTHO05D000318 3.3e-07 59.3 129 32.6
RhsimUnG0076300 Rhododendron simsii HOM05D000072 ORTHO05D000026 3.3e-07 59.3 140 32.1
Duzib213G0625 Durio zibethinus HOM05D000072 ORTHO05D000026 4.3e-07 58.9 141 29.1
Rhsim12G0142500 Rhododendron simsii HOM05D000072 ORTHO05D000026 4.3e-07 58.9 140 32.1
TPR.G22390 Trifolium pratense HOM05D000072 ORTHO05D000026 4.3e-07 58.9 140 27.1
MBI09_g25174_MAGBIO Magnolia biondii HOM05D000072 ORTHO05D000026 5.6e-07 58.5 158 29.1
Eucgr.F02100 Eucalyptus grandis HOM05D000260 ORTHO05D000318 7.3e-07 58.2 162 31.5
Sc06g0006900 Simmondsia chinensis HOM05D000260 ORTHO05D000318 1.2e-06 57.4 84 31.0
GSVIVG01008328001 Vitis vinifera HOM05D000072 ORTHO05D000026 1.2e-06 57.4 58 37.9
Carub.0001s1801 Capsella rubella HOM05D000260 ORTHO05D000318 1.6e-06 57.0 77 36.4
CiPaw.03G064200 Carya illinoinensis HOM05D000072 ORTHO05D000026 1.6e-06 57.0 83 36.1
TPR.G40726 Trifolium pratense HOM05D000072 ORTHO05D000318 1.6e-06 57.0 86 36.0
COL.COLO4_33402 Corchorus olitorius HOM05D000260 ORTHO05D000318 2.1e-06 56.6 130 28.5
Haze_00990 Corylus avellana HOM05D000260 ORTHO05D000318 2.1e-06 56.6 134 29.9
Eucgr.B00749 Eucalyptus grandis HOM05D000260 ORTHO05D000318 2.1e-06 56.6 134 26.9
Eucgr.B00761 Eucalyptus grandis HOM05D000260 ORTHO05D000318 2.1e-06 56.6 134 26.9
Eucgr.B00770 Eucalyptus grandis HOM05D000260 ORTHO05D000318 2.1e-06 56.6 134 26.9
MD17G1247900 Malus domestica HOM05D000260 ORTHO05D000318 2.1e-06 56.6 87 35.6
PGSC0003DMG400026388 Solanum tuberosum HOM05D000072 ORTHO05D000026 2.8e-06 56.2 135 29.6
MD17G1248300 Malus domestica HOM05D000260 ORTHO05D000318 4.7e-06 55.5 135 29.6
CSS0019807 Camellia sinensis var. sinensis HOM05D000260 ORTHO05D000318 6.2e-06 55.1 105 34.3
GSVIVG01008327001 Vitis vinifera HOM05D000260 ORTHO05D000318 6.2e-06 55.1 55 38.2
Atru.chr1.1003 Acer truncatum HOM05D000260 ORTHO05D000318 8.1e-06 54.7 45 55.6
Cfa023329 Carpinus fangiana HOM05D000260 ORTHO05D000318 8.1e-06 54.7 116 32.8
Ca_08084_v3 Cicer arietinum L. HOM05D000072 ORTHO05D000318 8.1e-06 54.7 86 31.4


User provided reference genes

Program Settings