Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro05473 Vaccinium macrocarpon HOM05D005427 ORTHO05D006461 2.7e-149 531.9 268 100.0
vmacro07282 Vaccinium macrocarpon HOM05D005427 ORTHO05D006461 2.1e-96 356.3 267 71.9
Rhsim07G0122400 Rhododendron simsii HOM05D005427 ORTHO05D006461 3.0e-79 299.3 274 60.6
CSS0026502 Camellia sinensis var. sinensis HOM05D005427 ORTHO05D006461 1.8e-68 263.5 262 55.7
CSS0032221 Camellia sinensis var. sinensis HOM05D005427 ORTHO05D006461 4.0e-68 262.3 264 56.4
CSS0024088 Camellia sinensis var. sinensis HOM05D005427 ORTHO05D006461 3.4e-67 259.2 264 56.1
TAR628G1492 Trochodendron aralioides HOM05D001631 ORTHO05D001591 2.9e-58 229.6 260 50.0
Dinv21205 Davidia involucrata HOM05D005427 ORTHO05D006461 3.0e-55 219.5 262 49.6
GSVIVG01017423001 Vitis vinifera HOM05D005427 ORTHO05D006461 7.4e-54 214.9 263 46.4
Dinv36993 Davidia involucrata HOM05D005427 ORTHO05D006461 3.4e-51 206.1 262 47.7
QL06p037683 Quercus lobata HOM05D005427 ORTHO05D006461 9.4e-49 198.0 262 44.7
TAR376G0349 Trochodendron aralioides HOM05D005427 ORTHO05D006461 1.4e-47 194.1 262 44.3
Atru.chr3.1127 Acer truncatum HOM05D005427 ORTHO05D006461 1.1e-46 191.0 262 42.4
Atru.chr3.1136 Acer truncatum HOM05D005427 ORTHO05D006461 1.1e-46 191.0 262 42.4
Ciclev10026408m.g Citrus clementina HOM05D005427 ORTHO05D006461 2.0e-46 190.3 262 43.5
Potri.017G091300 Populus trichocarpa HOM05D005427 ORTHO05D006461 2.0e-46 190.3 260 42.3
Prupe.6G211100 Prunus persica HOM05D005427 ORTHO05D006461 2.6e-46 189.9 256 42.6
Thecc.01G082100 Theobroma cacao HOM05D005427 ORTHO05D006461 3.3e-46 189.5 263 44.1
PGSC0003DMG400012980 Solanum tuberosum HOM05D005427 ORTHO05D006461 4.4e-46 189.1 264 43.2
Nn1g05775 Nelumbo nucifera HOM05D005427 ORTHO05D006461 7.4e-46 188.3 256 43.0
Gorai.007G232600 Gossypium raimondii HOM05D005427 ORTHO05D006461 1.7e-45 187.2 261 44.8
Solyc09g008680.4 Solanum lycopersicum HOM05D005427 ORTHO05D006461 1.7e-45 187.2 262 42.7
Sopen09g003480 Solanum pennellii HOM05D005427 ORTHO05D006461 1.7e-45 187.2 262 42.7
Nitab4.5_0004281g0090 Nicotiana tabacum HOM05D005427 ORTHO05D006461 2.2e-45 186.8 262 43.1
PGR102G2470 Punica granatum HOM05D005427 ORTHO05D006461 2.8e-45 186.4 262 42.4
Gohir.A11G206966 Gossypium hirsutum HOM05D005427 ORTHO05D006461 3.7e-45 186.0 261 45.2
CiPaw.08G147100 Carya illinoinensis HOM05D005427 ORTHO05D006461 4.8e-45 185.7 262 44.3
Migut.F01758 Erythranthe guttata HOM05D005427 ORTHO05D006461 2.4e-44 183.3 248 44.4
Aqoxy3G03178 Aquilegia oxysepala HOM05D005427 ORTHO05D006461 1.2e-43 181.0 264 40.2
MD15G1405500 Malus domestica HOM05D005427 ORTHO05D006461 1.2e-43 181.0 252 43.7
Gohir.D11G216500 Gossypium hirsutum HOM05D005427 ORTHO05D006461 1.0e-42 177.9 240 45.0
Eucgr.H02348 Eucalyptus grandis HOM05D005427 ORTHO05D006461 2.9e-42 176.4 248 41.5
RcHm_v2.0_Chr2g0109701 Rosa chinensis HOM05D005427 ORTHO05D006461 3.8e-42 176.0 260 40.8
Cfa001616 Carpinus fangiana HOM05D005427 ORTHO05D006461 6.5e-42 175.3 262 40.8
ECA233G5189 Erigeron canadensis HOM05D005427 ORTHO05D006461 1.4e-41 174.1 265 42.3
COL.COLO4_11665 Corchorus olitorius HOM05D005427 ORTHO05D006461 4.2e-41 172.6 264 40.9
FAN23G0196 Fragaria x ananassa HOM05D005427 ORTHO05D006461 7.2e-41 171.8 258 39.9
Peaxi162Scf01051g00142 Petunia axillaris HOM05D005427 ORTHO05D006461 1.6e-40 170.6 244 42.2
AL7G47510 Arabidopsis lyrata HOM05D005427 ORTHO05D006461 4.7e-40 169.1 259 38.2
DCAR_006436 Daucus carota HOM05D005427 ORTHO05D006461 1.0e-39 167.9 237 41.4
FvH4_1g18830 Fragaria vesca HOM05D005427 ORTHO05D006461 1.0e-39 167.9 254 38.2
Cpa.g.sc3.369 Carica papaya HOM05D005427 ORTHO05D006461 1.4e-39 167.5 259 39.0
Peaxi162Scf00500g00116 Petunia axillaris HOM05D005427 ORTHO05D006461 1.8e-39 167.2 239 41.8
FAN19G1732 Fragaria x ananassa HOM05D005427 ORTHO05D006461 3.0e-39 166.4 268 38.1
AT3G49645 Arabidopsis thaliana HOM05D005427 ORTHO05D006461 1.5e-38 164.1 261 36.0
Manes.13G105100 Manihot esculenta HOM05D005427 ORTHO05D006461 1.5e-38 164.1 245 40.8
PSO761G0697 Papaver somniferum HOM05D005427 ORTHO05D006461 2.0e-38 163.7 266 37.2
CAN.G1830.8 Capsicum annuum HOM05D005427 ORTHO05D006461 5.7e-38 162.2 259 38.2
SGA_v2.0_scaffold70G23436 Striga asiatica HOM05D005427 ORTHO05D006461 5.7e-38 162.2 256 40.2
RcHm_v2.0_Chr5g0054161 Rosa chinensis HOM05D005427 ORTHO05D006461 9.7e-38 161.4 257 38.5
PSO210G5957 Papaver somniferum HOM05D005427 ORTHO05D006461 1.7e-37 160.6 263 36.5
Phvul.003G285200 Phaseolus vulgaris HOM05D005427 ORTHO05D006461 3.7e-37 159.5 260 39.6
TWI74G0676 Tripterygium wilfordii HOM05D005427 ORTHO05D006461 3.7e-37 159.5 253 39.9
CANSAT01G2304 Cannabis sativa HOM05D005427 ORTHO05D006461 4.8e-37 159.1 259 39.8
ClCG09G016510 Citrullus lanatus HOM05D005427 ORTHO05D006461 4.8e-37 159.1 248 39.5
Carub.0005s1599 Capsella rubella HOM05D005427 ORTHO05D006461 8.2e-37 158.3 249 37.8
Haze_16903 Corylus avellana HOM05D005427 ORTHO05D006461 8.2e-37 158.3 267 39.7
THA.LOC104819282 Tarenaya hassleriana HOM05D005427 ORTHO05D006461 1.1e-36 157.9 249 38.2
Lalb_Chr04g0263231 Lupinus albus HOM05D005427 ORTHO05D006461 4.1e-36 156.0 263 36.1
Thhalv10010700m.g Eutrema salsugineum HOM05D005427 ORTHO05D006461 2.0e-35 153.7 249 37.3
HanXRQChr12g0368771 Helianthus annuus HOM05D005427 ORTHO05D006461 5.9e-35 152.1 241 39.8
Phvul.003G285800 Phaseolus vulgaris HOM05D005427 ORTHO05D006461 1.0e-34 151.4 260 38.1
Thhalv10019696m.g Eutrema salsugineum HOM05D005427 ORTHO05D006461 1.3e-34 151.0 249 36.1
Aa31LG4G18120 Aethionema arabicum HOM05D005427 ORTHO05D006461 2.2e-34 150.2 252 36.5
Sp5g12450 Schrenkiella parvula HOM05D005427 ORTHO05D006461 6.5e-34 148.7 249 35.7
CDE02G2678 Ceratophyllum demersum HOM05D005427 ORTHO05D006160 1.1e-33 147.9 265 34.3
CsaV3_7G007450 Cucumis sativus L. HOM05D005427 ORTHO05D006461 1.9e-33 147.1 260 36.9
A06p28350 Brassica napus HOM05D005427 ORTHO05D006461 3.2e-33 146.4 260 35.0
BraA06t25777Z Brassica rapa HOM05D005427 ORTHO05D006461 3.2e-33 146.4 260 35.0
Hund15020 Selenicereus undatus HOM05D005427 ORTHO05D006461 7.2e-33 145.2 263 37.3
SGA_v2.0_scaffold147G36350 Striga asiatica HOM05D005427 ORTHO05D006461 9.4e-33 144.8 256 36.7
AL5G29490 Arabidopsis lyrata HOM05D007023 ORTHO05D008684 1.2e-32 144.4 248 37.1
SGA_v2.0_scaffold4G02171 Striga asiatica HOM05D005427 ORTHO05D006461 1.2e-32 144.4 256 35.9
CARHR158680 Cardamine hirsuta HOM05D005427 ORTHO05D006461 1.6e-32 144.1 251 35.5
Ah.01g015840 Amaranthus hybridus HOM05D005427 ORTHO05D006461 2.1e-32 143.7 265 35.8
BraA07t29893Z Brassica rapa HOM05D005427 ORTHO05D006461 2.7e-32 143.3 260 33.8
Ah.01g003640 Amaranthus hybridus HOM05D000109 ORTHO05D000520 3.6e-32 142.9 247 36.0
BcaC01g02424 Brassica carinata HOM05D005427 ORTHO05D006461 3.6e-32 142.9 249 35.3
C03p65440 Brassica napus HOM05D005427 ORTHO05D006461 3.6e-32 142.9 260 34.2
BolC3t18796H Brassica oleracea HOM05D005427 ORTHO05D006461 3.6e-32 142.9 260 34.2
Duzib264G0001 Durio zibethinus HOM05D005427 ORTHO05D006461 8.0e-32 141.7 224 39.7
Sed0018601 Sechium edule HOM05D005427 ORTHO05D006461 8.0e-32 141.7 248 35.5
EL10Ac9g20957 Beta vulgaris HOM05D005427 ORTHO05D006461 1.0e-31 141.4 253 37.5
THA.LOC104799739 Tarenaya hassleriana HOM05D005427 ORTHO05D006461 1.8e-31 140.6 265 34.0
Lsat_1_v5_gn_8_18901 Lactuca sativa HOM05D005427 ORTHO05D006461 3.0e-31 139.8 261 38.3
Hund13132 Selenicereus undatus HOM05D005427 ORTHO05D006461 3.0e-31 139.8 264 35.6
MELO3C018556.2 Cucumis melo HOM05D005427 ORTHO05D006461 6.8e-31 138.7 263 35.7
BcaB01g00686 Brassica carinata HOM05D005427 ORTHO05D006461 2.6e-30 136.7 249 32.9
Glyma.08G273000 Glycine max HOM05D005427 ORTHO05D006461 5.7e-30 135.6 263 32.7
AUR62024067 Chenopodium quinoa HOM05D005427 ORTHO05D006461 1.3e-29 134.4 250 37.6
A07p22100 Brassica napus HOM05D005427 ORTHO05D006461 2.8e-29 133.3 280 32.5
Sc06g0009050 Simmondsia chinensis HOM05D005427 ORTHO05D006461 2.8e-29 133.3 258 36.0
arahy.Tifrunner.gnm1.ann1.SHER6S Arachis hypogaea HOM05D006058 ORTHO05D007686 6.3e-29 132.1 276 33.7
AUR62041740 Chenopodium quinoa HOM05D005427 ORTHO05D006461 6.3e-29 132.1 247 36.8
AUR62012052 Chenopodium quinoa HOM05D005427 ORTHO05D006461 1.1e-28 131.3 261 35.6
BcaB02g09598 Brassica carinata HOM05D005427 ORTHO05D006461 4.1e-28 129.4 250 32.0
Lj3g0020172 Lotus japonicus HOM05D005427 ORTHO05D006461 5.3e-28 129.0 267 32.2
arahy.Tifrunner.gnm1.ann1.Y2QWLJ Arachis hypogaea HOM05D006058 ORTHO05D007686 7.0e-28 128.6 290 32.1
BcaC07g39428 Brassica carinata HOM05D005427 ORTHO05D006461 4.5e-27 125.9 249 31.7
AUR62019836 Chenopodium quinoa HOM05D005427 ORTHO05D006461 7.7e-27 125.2 254 35.4
BraA06t24896Z Brassica rapa HOM05D007023 ORTHO05D008684 1.0e-26 124.8 239 32.2
Hund00873 Selenicereus undatus HOM05D005427 ORTHO05D006461 1.0e-26 124.8 236 36.9
TPR.G15264 Trifolium pratense HOM05D005427 ORTHO05D006461 2.9e-26 123.2 268 32.1
A06p18060 Brassica napus HOM05D007023 ORTHO05D008684 6.5e-26 122.1 240 30.4
MD01G1046300 Malus domestica HOM05D005427 ORTHO05D006461 1.1e-25 121.3 216 38.4
Rhsim10G0082400 Rhododendron simsii HOM05D005427 ORTHO05D006461 1.9e-25 120.6 79 73.4
Actinidia11934 Actinidia chinensis HOM05D005427 ORTHO05D006461 2.5e-25 120.2 126 54.0
Hma1.2p1_0561F.1_g178960 Hydrangea macrophylla HOM05D005427 ORTHO05D006461 2.5e-25 120.2 191 41.9
Zm00001eb210960 Zea mays HOM05D005427 ORTHO05D006461 2.5e-25 120.2 245 32.2
Psat4g120800 Pisum sativum HOM05D005427 ORTHO05D006461 3.2e-25 119.8 272 33.1
Cc09_g03000 Coffea canephora HOM05D005427 ORTHO05D006461 7.2e-25 118.6 124 50.8
HPP92_026626 Vanilla planifolia HOM05D005427 ORTHO05D006461 3.6e-24 116.3 256 32.0
Zm00001eb064010 Zea mays HOM05D005427 ORTHO05D006461 3.6e-24 116.3 280 30.0
Glyma.20G162400 Glycine max HOM05D005427 ORTHO05D006461 4.7e-24 115.9 263 29.7
HPP92_024834 Vanilla planifolia HOM05D005427 ORTHO05D006461 4.7e-24 115.9 260 31.5
Phvul.002G065300 Phaseolus vulgaris HOM05D005427 ORTHO05D006461 8.8e-23 111.7 201 36.8
FAN26G2664 Fragaria x ananassa HOM05D005427 ORTHO05D006461 1.5e-22 110.9 252 31.0
Os10g0360900 Oryza sativa ssp. japonica HOM05D005427 ORTHO05D006461 2.0e-22 110.5 258 29.5
C08p24660 Brassica napus HOM05D007023 ORTHO05D008684 2.6e-22 110.2 251 29.5
Sabra17G0080400 Salix brachista HOM05D005427 ORTHO05D006461 3.4e-22 109.8 246 33.3
BolC8t50081H Brassica oleracea HOM05D007023 ORTHO05D008684 5.7e-22 109.0 265 28.7
FAN27G1155 Fragaria x ananassa HOM05D005427 ORTHO05D006461 4.8e-21 105.9 249 30.1
CSS0003252 Camellia sinensis var. sinensis HOM05D005427 ORTHO05D006461 8.3e-21 105.1 83 59.0
Medtr8g067265 Medicago truncatula HOM05D005427 ORTHO05D006461 5.4e-20 102.4 245 30.6
Nitab4.5_0006709g0040 Nicotiana tabacum HOM05D005427 ORTHO05D006461 5.0e-18 95.9 78 61.5
Cc09_g02990 Coffea canephora HOM05D005427 ORTHO05D006461 8.6e-18 95.1 91 54.9
Pp3c24_9930 Physcomitrium patens HOM05D005427 ORTHO05D006461 8.6e-18 95.1 258 25.6
MBI16_g26727_MAGBIO Magnolia biondii HOM05D005427 ORTHO05D006461 1.5e-17 94.4 105 50.5
Carub.0005s0959 Capsella rubella HOM05D005427 ORTHO05D006461 1.9e-17 94.0 111 44.1
AagrBONN_evm.TU.Sc2ySwM_228.2937 Anthoceros agrestis HOM05D005427 ORTHO05D006461 5.5e-17 92.4 241 27.4
VMungo1309G2225 Vigna mungo HOM05D005427 ORTHO05D006461 2.3e-15 87.0 128 42.2
MBI16_g14676_MAGBIO Magnolia biondii HOM05D005427 ORTHO05D006461 6.8e-15 85.5 199 33.2
MSTRG.375 Avicennia marina HOM05D005427 ORTHO05D006461 2.0e-14 84.0 77 51.9
MD00G1139600 Malus domestica HOM05D005427 ORTHO05D006461 2.0e-14 84.0 56 67.9
MD04G1240700 Malus domestica HOM05D005427 ORTHO05D006461 2.0e-14 84.0 56 67.9
Os07g0264900 Oryza sativa ssp. japonica HOM05D005427 ORTHO05D006461 2.0e-14 84.0 214 27.1
EL10Ac6g13479 Beta vulgaris HOM05D005427 ORTHO05D006461 1.1e-12 78.2 93 44.1
SalBow7G4264 Salvia bowleyana HOM05D005427 ORTHO05D006461 1.2e-11 74.7 109 41.3
TWI77G0140 Tripterygium wilfordii HOM05D005427 ORTHO05D006461 1.2e-11 74.7 86 44.2
AagrBONN_evm.TU.Sc2ySwM_344.3300 Anthoceros agrestis HOM05D005427 ORTHO05D006461 1.0e-10 71.6 118 36.4
SEGI_00262 Sequoiadendron giganteum HOM05D005427 ORTHO05D006461 1.7e-10 70.9 96 38.5
Ah.16g109230 Amaranthus hybridus HOM05D005427 ORTHO05D006461 9.5e-09 65.1 151 30.5
SMO367G1008 Selaginella moellendorffii HOM05D005427 ORTHO05D006461 6.1e-08 62.4 53 47.2
Mapoly0002s0147 Marchantia polymorpha HOM05D005427 ORTHO05D006461 2.0e-06 57.4 196 28.6
Mapoly0085s0034 Marchantia polymorpha HOM05D005427 ORTHO05D006461 3.4e-06 56.6 244 23.4


User provided reference genes

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