Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro05455 Vaccinium macrocarpon HOM05D004010 ORTHO05D004995 0.0e+00 1194.9 592 100.0
vmacro05856 Vaccinium macrocarpon HOM05D004010 ORTHO05D004995 1.1e-150 537.7 545 60.0
Rhsim10G0018100 Rhododendron simsii HOM05D004010 ORTHO05D004995 3.8e-127 459.5 545 51.7
CSS0006564 Camellia sinensis var. sinensis HOM05D004010 ORTHO05D004995 7.2e-118 428.7 545 48.3
CSS0029677 Camellia sinensis var. sinensis HOM05D004010 ORTHO05D004995 8.0e-117 425.2 545 48.4
Actinidia36110 Actinidia chinensis HOM05D004010 ORTHO05D004995 2.2e-114 417.2 545 47.7
Dinv33448 Davidia involucrata HOM05D004010 ORTHO05D004995 1.2e-101 374.8 591 43.1
TAR371G0622 Trochodendron aralioides HOM05D004010 ORTHO05D004995 2.9e-95 353.6 546 41.4
Manes.17G113000 Manihot esculenta HOM05D004010 ORTHO05D004995 2.8e-93 347.1 546 41.4
GSVIVG01032418001 Vitis vinifera HOM05D004010 ORTHO05D004995 4.7e-93 346.3 546 40.7
QL02p075066 Quercus lobata HOM05D004010 ORTHO05D004995 4.4e-91 339.7 546 39.9
Cfa007379 Carpinus fangiana HOM05D004010 ORTHO05D004995 7.0e-89 332.4 547 39.7
CiPaw.03G042500 Carya illinoinensis HOM05D004010 ORTHO05D004995 2.7e-88 330.5 546 40.1
Haze_14730 Corylus avellana HOM05D004010 ORTHO05D004995 1.0e-87 328.6 580 38.6
Solyc02g086500.3 Solanum lycopersicum HOM05D004010 ORTHO05D004995 1.7e-87 327.8 549 39.5
PGSC0003DMG400012627 Solanum tuberosum HOM05D004010 ORTHO05D004995 3.9e-87 326.6 549 39.3
Sopen02g031220 Solanum pennellii HOM05D004010 ORTHO05D004995 1.1e-86 325.1 549 39.3
TWI36G0979 Tripterygium wilfordii HOM05D004010 ORTHO05D004995 1.1e-86 325.1 547 39.3
Atru.chr6.2370 Acer truncatum HOM05D004010 ORTHO05D004995 1.2e-85 321.6 546 39.4
CAN.G473.4 Capsicum annuum HOM05D004010 ORTHO05D004995 1.6e-85 321.2 548 38.5
Aqoxy3G01154 Aquilegia oxysepala HOM05D004010 ORTHO05D004995 4.0e-84 316.6 546 37.7
Cc07_g01800 Coffea canephora HOM05D004010 ORTHO05D004995 8.9e-84 315.5 547 37.8
Prupe.3G290300 Prunus persica HOM05D004010 ORTHO05D004995 2.0e-83 314.3 546 39.0
Ciclev10014033m.g Citrus clementina HOM05D004010 ORTHO05D004995 2.6e-83 313.9 546 39.0
Lsat_1_v5_gn_4_183480 Lactuca sativa HOM05D004010 ORTHO05D004995 5.8e-83 312.8 549 37.7
Nn4g22648 Nelumbo nucifera HOM05D004010 ORTHO05D004995 9.8e-83 312.0 546 38.6
Eucgr.I01751 Eucalyptus grandis HOM05D004010 ORTHO05D004995 6.4e-82 309.3 546 37.5
Sabra16G0225000 Salix brachista HOM05D004010 ORTHO05D004995 3.2e-81 307.0 563 37.8
Sabra16G0225700 Salix brachista HOM05D004010 ORTHO05D004995 3.2e-81 307.0 563 37.8
HanXRQChr09g0255111 Helianthus annuus HOM05D004010 ORTHO05D004995 4.1e-81 306.6 549 38.3
Glyma.19G004700 Glycine max HOM05D004010 ORTHO05D004995 7.1e-81 305.8 550 37.5
Potri.001G346000 Populus trichocarpa HOM05D004010 ORTHO05D004995 1.6e-80 304.7 551 38.7
Lalb_Chr24g0397171 Lupinus albus HOM05D004010 ORTHO05D004995 2.1e-80 304.3 553 36.9
Gorai.006G032700 Gossypium raimondii HOM05D004010 ORTHO05D004995 2.7e-80 303.9 553 37.6
Lj2g0015656 Lotus japonicus HOM05D004010 ORTHO05D004995 3.5e-80 303.5 548 37.2
Gohir.D09G028100 Gossypium hirsutum HOM05D004010 ORTHO05D004995 1.3e-79 301.6 553 37.4
ECA232G4079 Erigeron canadensis HOM05D004010 ORTHO05D004995 1.7e-79 301.2 550 37.5
FvH4_6g51330 Fragaria vesca HOM05D004010 ORTHO05D004995 3.0e-79 300.4 548 36.1
Medtr6g005010 Medicago truncatula HOM05D004010 ORTHO05D004995 4.3e-78 296.6 548 36.1
PSO478G2834 Papaver somniferum HOM05D004010 ORTHO05D004995 5.6e-78 296.2 546 35.3
arahy.Tifrunner.gnm1.ann1.8M6LVM Arachis hypogaea HOM05D004010 ORTHO05D004995 1.6e-77 294.7 547 36.6
PSO017G0470 Papaver somniferum HOM05D004010 ORTHO05D004995 2.8e-77 293.9 546 35.3
Ca_04154_v3 Cicer arietinum L. HOM05D004010 ORTHO05D004995 3.6e-77 293.5 548 35.9
RcHm_v2.0_Chr2g0173001 Rosa chinensis HOM05D004010 ORTHO05D004995 6.2e-77 292.7 547 36.7
MD09G1028200 Malus domestica HOM05D004010 ORTHO05D004995 8.1e-77 292.4 546 36.4
Nitab4.5_0002682g0110 Nicotiana tabacum HOM05D004010 ORTHO05D004995 8.1e-77 292.4 375 48.0
Duzib187G0443 Durio zibethinus HOM05D004010 ORTHO05D004995 1.1e-76 292.0 546 36.4
SGA_v2.0_scaffold135G34899 Striga asiatica HOM05D004010 ORTHO05D004995 5.2e-76 289.7 547 36.2
Psat1g055320 Pisum sativum HOM05D004010 ORTHO05D004995 2.0e-75 287.7 548 35.4
PGR142G3424 Punica granatum HOM05D004010 ORTHO05D004995 2.0e-75 287.7 554 35.6
CANSAT64G1980 Cannabis sativa HOM05D004010 ORTHO05D004995 4.4e-75 286.6 546 36.6
VMungo0464G1595 Vigna mungo HOM05D004010 ORTHO05D004995 4.4e-75 286.6 555 34.8
Nitab4.5_0006802g0030 Nicotiana tabacum HOM05D004010 ORTHO05D004995 5.8e-75 286.2 375 47.5
SalBow6G2090 Salvia bowleyana HOM05D004010 ORTHO05D004995 5.8e-75 286.2 549 36.1
Thecc.04G015900 Theobroma cacao HOM05D004010 ORTHO05D004995 7.6e-75 285.8 546 35.9
Migut.H00083 Erythranthe guttata HOM05D004010 ORTHO05D004995 1.3e-74 285.0 547 36.0
TPR.G14085 Trifolium pratense HOM05D004010 ORTHO05D004995 1.3e-74 285.0 548 34.9
Lju41A39G70 Lonicera japonica HOM05D004010 ORTHO05D004995 1.7e-74 284.6 561 36.7
MD17G1029800 Malus domestica HOM05D004010 ORTHO05D004995 1.1e-73 282.0 546 35.5
arahy.Tifrunner.gnm1.ann1.TK4K1F Arachis hypogaea HOM05D004010 ORTHO05D004995 4.1e-73 280.0 529 36.5
DCAR_001437 Daucus carota HOM05D004010 ORTHO05D004995 1.0e-71 275.4 545 35.4
Sc03g0007550 Simmondsia chinensis HOM05D004010 ORTHO05D004995 3.3e-70 270.4 545 35.0
Thhalv10003508m.g Eutrema salsugineum HOM05D004010 ORTHO05D004995 6.8e-68 262.7 546 33.3
THA.LOC104825324 Tarenaya hassleriana HOM05D004010 ORTHO05D004995 6.8e-68 262.7 546 33.9
BcaC06g30965 Brassica carinata HOM05D004010 ORTHO05D004995 4.4e-67 260.0 546 33.7
AUR62043055 Chenopodium quinoa HOM05D004010 ORTHO05D004995 7.6e-67 259.2 548 34.5
BraA06t27018Z Brassica rapa HOM05D004010 ORTHO05D004995 2.9e-66 257.3 546 33.3
A06p40990 Brassica napus HOM05D004010 ORTHO05D004995 1.1e-65 255.4 546 33.2
ClCG10G013960 Citrullus lanatus HOM05D004010 ORTHO05D004995 1.1e-65 255.4 546 33.5
BcaC06g33789 Brassica carinata HOM05D004010 ORTHO05D004995 1.4e-65 255.0 546 33.2
C07p36860 Brassica napus HOM05D004010 ORTHO05D004995 1.4e-65 255.0 546 33.2
BolC7t44198H Brassica oleracea HOM05D004010 ORTHO05D004995 1.4e-65 255.0 546 33.2
Cpa.g.sc108.58 Carica papaya HOM05D004010 ORTHO05D004995 1.4e-65 255.0 358 45.8
Aa31LG2G5000 Aethionema arabicum HOM05D004010 ORTHO05D004995 5.4e-65 253.1 546 32.8
Sed0022234 Sechium edule HOM05D004010 ORTHO05D004995 5.4e-65 253.1 546 33.9
Oeu006813.1 Olea europaea HOM05D004010 ORTHO05D004995 7.1e-65 252.7 580 33.6
Sp2g16800 Schrenkiella parvula HOM05D004010 ORTHO05D004995 7.1e-65 252.7 546 32.4
EL10Ac4g08587 Beta vulgaris HOM05D004010 ORTHO05D004995 1.2e-64 251.9 542 33.6
CsaV3_3G042730 Cucumis sativus L. HOM05D004010 ORTHO05D004995 1.2e-64 251.9 547 33.3
AT3G27670 Arabidopsis thaliana HOM05D004010 ORTHO05D004995 2.1e-64 251.1 546 32.4
AL5G17090 Arabidopsis lyrata HOM05D004010 ORTHO05D004995 4.6e-64 250.0 546 32.4
MELO3C009985.2 Cucumis melo HOM05D004010 ORTHO05D004995 5.1e-63 246.5 547 32.9
Carub.0005s0611 Capsella rubella HOM05D004010 ORTHO05D004995 1.3e-61 241.9 546 31.7
Phvul.004G009818 Phaseolus vulgaris HOM05D004010 ORTHO05D004995 2.1e-61 241.1 547 32.0
FAN14G1482 Fragaria x ananassa HOM05D004010 ORTHO05D004995 7.6e-59 232.6 410 37.1
FAN05G5546 Fragaria x ananassa HOM05D004010 ORTHO05D004995 1.3e-58 231.9 409 36.4
ATR1158G023 Amborella trichopoda HOM05D004010 ORTHO05D004995 4.9e-58 229.9 571 31.3
FAN09G4321 Fragaria x ananassa HOM05D004010 ORTHO05D004995 4.6e-56 223.4 406 37.2
COL.COLO4_29097 Corchorus olitorius HOM05D004010 ORTHO05D004995 6.0e-56 223.0 424 35.4
Os01g0169500 Oryza sativa ssp. japonica HOM05D004010 ORTHO05D004995 9.6e-54 215.7 551 30.3
AUR62034752 Chenopodium quinoa HOM05D004010 ORTHO05D004995 3.8e-50 203.8 363 38.8
Peaxi162Scf00129g01535 Petunia axillaris HOM05D004010 ORTHO05D004995 6.4e-50 203.0 271 45.8
CDE05G1902 Ceratophyllum demersum HOM05D004010 ORTHO05D004995 1.6e-48 198.4 409 34.5
Zm00001eb123050 Zea mays HOM05D004010 ORTHO05D004995 1.0e-47 195.7 547 29.1
Phvul.007G113156 Phaseolus vulgaris HOM05D004010 ORTHO05D004995 7.4e-46 189.5 268 42.9
Hund06718 Selenicereus undatus HOM05D004010 ORTHO05D004995 7.1e-41 172.9 259 41.3
CARHR149120 Cardamine hirsuta HOM05D004010 ORTHO05D004995 3.3e-38 164.1 384 30.7
MBI10_g32033_MAGBIO Magnolia biondii HOM05D004010 ORTHO05D004995 7.9e-32 142.9 160 52.5
Phvul.004G009761 Phaseolus vulgaris HOM05D004010 ORTHO05D004995 4.8e-29 133.7 205 39.0
Sopen00g011090 Solanum pennellii HOM05D004010 ORTHO05D004995 6.3e-29 133.3 194 42.8
Phvul.004G009536 Phaseolus vulgaris HOM05D004010 ORTHO05D004995 5.3e-28 130.2 205 38.5
Mapoly0001s0420 Marchantia polymorpha HOM05D004010 ORTHO05D004995 4.2e-25 120.6 365 27.4
vmacro19309 Vaccinium macrocarpon HOM05D000068 ORTHO05D004995 3.6e-24 117.5 78 75.6
vmacro07949 Vaccinium macrocarpon HOM05D000068 ORTHO05D000084 4.1e-20 104.0 53 92.5
FAN14G1049 Fragaria x ananassa HOM05D004010 ORTHO05D004995 2.9e-18 97.8 83 60.2
vmacro13900 Vaccinium macrocarpon HOM05D000120 ORTHO05D000068 6.5e-18 96.7 52 86.5
FvH4_5g31861 Fragaria vesca HOM05D004010 ORTHO05D046033 2.6e-14 84.7 64 59.4
FvH4_6g51560 Fragaria vesca HOM05D004010 ORTHO05D004995 3.5e-11 74.3 242 25.6
Phvul.004G009118 Phaseolus vulgaris HOM05D004010 ORTHO05D004995 5.9e-11 73.6 57 54.4
Hund06717 Selenicereus undatus HOM05D004010 ORTHO05D004995 7.7e-11 73.2 53 54.7
FvH4_6g51540 Fragaria vesca HOM05D004010 ORTHO05D004995 9.4e-09 66.2 64 53.1
RcHm_v2.0_Chr4g0403131 Rosa chinensis HOM05D003776 ORTHO05D004459 3.6e-08 64.3 60 55.0
RcHm_v2.0_Chr4g0403161 Rosa chinensis HOM05D003776 ORTHO05D004459 3.6e-08 64.3 60 55.0
SMO361G0448 Selaginella moellendorffii HOM05D004010 ORTHO05D004995 3.0e-07 61.2 219 27.9


User provided reference genes

Program Settings