Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro05441 Vaccinium macrocarpon HOM05D005809 ORTHO05D007259 0.0e+00 1414.4 743 100.0
vmacro16802 Vaccinium macrocarpon HOM05D005809 ORTHO05D007259 5.0e-100 369.8 278 74.5
Rhsim01G0033400 Rhododendron simsii HOM05D005809 ORTHO05D007259 2.3e-68 264.6 179 80.4
CSS0045900 Camellia sinensis var. sinensis HOM05D005809 ORTHO05D007259 6.8e-65 253.1 206 68.0
Dinv41380 Davidia involucrata HOM05D005809 ORTHO05D007259 6.0e-61 240.0 206 62.1
Dinv43244 Davidia involucrata HOM05D005809 ORTHO05D007259 2.8e-58 231.1 206 60.2
QL02p093215 Quercus lobata HOM05D005809 ORTHO05D007259 6.8e-57 226.5 208 59.6
Hma1.2p1_0222F.1_g093550 Hydrangea macrophylla HOM05D005809 ORTHO05D007259 7.5e-56 223.0 189 61.9
GSVIVG01023603001 Vitis vinifera HOM05D005809 ORTHO05D007259 9.9e-56 222.6 206 58.7
Lalb_Chr23g0275681 Lupinus albus HOM05D005809 ORTHO05D007259 8.3e-55 219.5 188 59.0
CiPaw.15G168900 Carya illinoinensis HOM05D005809 ORTHO05D007259 7.1e-54 216.5 206 54.9
Atru.chr7.51 Acer truncatum HOM05D005809 ORTHO05D007259 1.6e-53 215.3 206 55.3
Actinidia04301 Actinidia chinensis HOM05D005809 ORTHO05D007259 6.6e-52 209.9 189 61.4
Eucgr.C02542 Eucalyptus grandis HOM05D005809 ORTHO05D007259 1.9e-51 208.4 189 56.6
Prupe.7G262800 Prunus persica HOM05D005809 ORTHO05D007259 1.6e-50 205.3 189 59.8
Glyma.06G219200 Glycine max HOM05D005809 ORTHO05D007259 2.8e-50 204.5 189 55.6
Sabra06G0140200 Salix brachista HOM05D005809 ORTHO05D007259 2.8e-50 204.5 212 55.7
Dinv42856 Davidia involucrata HOM05D005809 ORTHO05D007259 4.7e-50 203.8 172 62.8
Eucgr.C02492 Eucalyptus grandis HOM05D005809 ORTHO05D007259 1.8e-49 201.8 189 55.6
MD02G1007700 Malus domestica HOM05D005809 ORTHO05D007259 2.4e-49 201.4 189 57.1
Thecc.09G030800 Theobroma cacao HOM05D005809 ORTHO05D007259 2.4e-49 201.4 189 57.7
COL.COLO4_18808 Corchorus olitorius HOM05D005809 ORTHO05D007259 4.0e-49 200.7 189 58.2
FvH4_1g00940 Fragaria vesca HOM05D005809 ORTHO05D007259 4.0e-49 200.7 205 57.1
Nn8g39891 Nelumbo nucifera HOM05D005809 ORTHO05D007259 4.0e-49 200.7 206 52.9
Solyc07g005640.3 Solanum lycopersicum HOM05D005809 ORTHO05D007259 4.0e-49 200.7 207 55.6
Duzib187G1947 Durio zibethinus HOM05D005809 ORTHO05D007259 8.9e-49 199.5 190 56.8
Lj6g0016819 Lotus japonicus HOM05D005809 ORTHO05D007259 1.2e-48 199.1 189 56.6
Sopen07g001740 Solanum pennellii HOM05D005809 ORTHO05D007259 1.2e-48 199.1 207 54.6
TAR636G3217 Trochodendron aralioides HOM05D005809 ORTHO05D007259 1.2e-48 199.1 190 58.4
arahy.Tifrunner.gnm1.ann1.Z5GGTZ Arachis hypogaea HOM05D005809 ORTHO05D007259 1.5e-48 198.7 189 54.0
Ciclev10009378m.g Citrus clementina HOM05D005809 ORTHO05D007259 2.0e-48 198.4 189 54.0
RcHm_v2.0_Chr2g0085671 Rosa chinensis HOM05D005809 ORTHO05D007259 2.6e-48 198.0 189 59.8
arahy.Tifrunner.gnm1.ann1.46B1EJ Arachis hypogaea HOM05D005809 ORTHO05D007259 5.8e-48 196.8 189 53.4
MSTRG.19648 Avicennia marina HOM05D005809 ORTHO05D007259 5.8e-48 196.8 189 56.1
Peaxi162Scf00401g00082 Petunia axillaris HOM05D005809 ORTHO05D007259 5.8e-48 196.8 191 55.0
Ca_03733_v3 Cicer arietinum L. HOM05D005809 ORTHO05D007259 9.9e-48 196.1 191 53.4
PGSC0003DMG401011139 Solanum tuberosum HOM05D005809 ORTHO05D007259 9.9e-48 196.1 207 53.6
Phvul.009G195100 Phaseolus vulgaris HOM05D005809 ORTHO05D007259 1.3e-47 195.7 189 54.0
TWI32G0918 Tripterygium wilfordii HOM05D005809 ORTHO05D007259 2.2e-47 194.9 209 52.6
Gohir.D05G056000 Gossypium hirsutum HOM05D005809 ORTHO05D007259 2.9e-47 194.5 189 54.5
CsaV3_2G007490 Cucumis sativus L. HOM05D005809 ORTHO05D007259 3.8e-47 194.1 206 54.4
Gorai.009G057000 Gossypium raimondii HOM05D005809 ORTHO05D007259 3.8e-47 194.1 189 54.5
CAN.G160.58 Capsicum annuum HOM05D005809 ORTHO05D007259 6.4e-47 193.4 188 56.4
MELO3C004136.2 Cucumis melo HOM05D005809 ORTHO05D007259 6.4e-47 193.4 206 53.4
Manes.06G033951 Manihot esculenta HOM05D005809 ORTHO05D007259 6.4e-47 193.4 208 55.3
Sed0001225 Sechium edule HOM05D005809 ORTHO05D007259 6.4e-47 193.4 206 53.4
Potri.006G184600 Populus trichocarpa HOM05D005809 ORTHO05D007259 1.9e-46 191.8 208 52.9
Aqoxy2G02328 Aquilegia oxysepala HOM05D005809 ORTHO05D007259 5.4e-46 190.3 189 56.6
CANSAT11G2656 Cannabis sativa HOM05D005809 ORTHO05D007259 9.2e-46 189.5 192 56.8
TPR.G20735 Trifolium pratense HOM05D005809 ORTHO05D007259 1.6e-45 188.7 191 53.9
CARHR271730 Cardamine hirsuta HOM05D005809 ORTHO05D007259 2.1e-45 188.3 206 51.9
FAN23G2666 Fragaria x ananassa HOM05D005809 ORTHO05D007259 2.7e-45 188.0 189 58.2
SalBow1G5910 Salvia bowleyana HOM05D005809 ORTHO05D007259 3.5e-45 187.6 206 51.9
ECA247G0266 Erigeron canadensis HOM05D005809 ORTHO05D007259 4.6e-45 187.2 190 55.8
AL8G34030 Arabidopsis lyrata HOM05D005809 ORTHO05D007259 6.0e-45 186.8 206 52.4
Medtr2g460780 Medicago truncatula HOM05D005809 ORTHO05D007259 6.0e-45 186.8 189 51.9
TWI34G1090 Tripterygium wilfordii HOM05D005809 ORTHO05D007259 6.0e-45 186.8 208 50.5
Carub.0008s1848 Capsella rubella HOM05D005809 ORTHO05D007259 7.8e-45 186.4 208 50.5
Cpa.g.sc46.154 Carica papaya HOM05D005809 ORTHO05D007259 1.0e-44 186.0 189 54.0
Migut.J01341 Erythranthe guttata HOM05D005809 ORTHO05D007259 1.3e-44 185.7 189 52.9
Lsat_1_v5_gn_8_63301 Lactuca sativa HOM05D005809 ORTHO05D007259 1.3e-44 185.7 190 54.2
Hma1.2p1_0010F.1_g006710 Hydrangea macrophylla HOM05D005809 ORTHO05D007259 2.3e-44 184.9 162 60.5
HanXRQChr17g0552351 Helianthus annuus HOM05D005809 ORTHO05D007259 3.9e-44 184.1 206 51.9
Sp6g19620 Schrenkiella parvula HOM05D005809 ORTHO05D007259 6.6e-44 183.3 189 53.4
Thhalv10014592m.g Eutrema salsugineum HOM05D005809 ORTHO05D007259 4.3e-43 180.6 206 50.5
Aa31LG3G13770 Aethionema arabicum HOM05D000853 ORTHO05D000723 7.3e-43 179.9 205 48.8
Duzib168G0271 Durio zibethinus HOM05D005809 ORTHO05D007259 7.3e-43 179.9 188 54.8
Ah.02g128190 Amaranthus hybridus HOM05D005809 ORTHO05D007259 9.6e-43 179.5 189 55.6
BraA10t43609Z Brassica rapa HOM05D005809 ORTHO05D007259 2.1e-42 178.3 208 51.9
THA.LOC104817821 Tarenaya hassleriana HOM05D005809 ORTHO05D007259 2.8e-42 177.9 190 54.2
Glyma.06G219400 Glycine max HOM05D005809 ORTHO05D007259 3.6e-42 177.6 189 49.7
Oeu052197.1 Olea europaea HOM05D005809 ORTHO05D007259 1.1e-41 176.0 191 52.4
AT5G57950 Arabidopsis thaliana HOM05D005809 ORTHO05D007259 1.8e-41 175.3 206 51.0
FAN28G0834 Fragaria x ananassa HOM05D005809 ORTHO05D007259 3.1e-41 174.5 179 57.0
PGR102G1797 Punica granatum HOM05D005809 ORTHO05D007259 5.2e-41 173.7 189 50.8
Actinidia38322 Actinidia chinensis HOM05D005809 ORTHO05D007259 1.2e-40 172.6 131 71.8
ClCG02G014530 Citrullus lanatus HOM05D005809 ORTHO05D007259 1.5e-40 172.2 194 51.5
Sc08g0005640 Simmondsia chinensis HOM05D005809 ORTHO05D007259 1.5e-40 172.2 188 53.7
A10p16200 Brassica napus HOM05D005809 ORTHO05D007259 2.0e-40 171.8 206 51.0
Psat1g021800 Pisum sativum HOM05D005809 ORTHO05D007259 2.6e-40 171.4 189 49.7
ATR0739G206 Amborella trichopoda HOM05D005809 ORTHO05D007259 4.4e-40 170.6 192 51.0
CDE12G0564 Ceratophyllum demersum HOM05D005809 ORTHO05D007259 7.6e-40 169.9 204 49.5
Haze_19206 Corylus avellana HOM05D005809 ORTHO05D007259 2.9e-39 167.9 189 51.9
C09p49790 Brassica napus HOM05D005809 ORTHO05D007259 1.9e-38 165.2 206 49.0
BolC9t57830H Brassica oleracea HOM05D005809 ORTHO05D007259 1.9e-38 165.2 206 49.5
PSO063G2086 Papaver somniferum HOM05D005809 ORTHO05D007259 1.9e-38 165.2 189 50.8
DCAR_017909 Daucus carota HOM05D005809 ORTHO05D007259 3.2e-38 164.5 190 51.1
PSO782G1751 Papaver somniferum HOM05D005809 ORTHO05D007259 5.4e-38 163.7 189 50.3
Nitab4.5_0005653g0040 Nicotiana tabacum HOM05D005809 ORTHO05D007259 7.1e-38 163.3 157 54.8
Nitab4.5_0001571g0010 Nicotiana tabacum HOM05D005809 ORTHO05D007259 1.6e-37 162.2 163 51.5
unitig_746.g26584 Utricularia gibba HOM05D005809 ORTHO05D007259 2.7e-37 161.4 189 49.7
SGA_v2.0_scaffold265G46107 Striga asiatica HOM05D005809 ORTHO05D007259 6.0e-37 160.2 184 50.5
HPP92_016035 Vanilla planifolia HOM05D005809 ORTHO05D007259 3.9e-36 157.5 198 47.5
Gohir.A05G055000 Gossypium hirsutum HOM05D005809 ORTHO05D007259 8.7e-36 156.4 149 55.0
HPP92_016019 Vanilla planifolia HOM05D005809 ORTHO05D007259 8.7e-36 156.4 194 47.4
Os09g0420600 Oryza sativa ssp. japonica HOM05D005809 ORTHO05D007259 1.1e-35 156.0 189 46.6
Lj9C717G7 Lonicera japonica HOM05D005809 ORTHO05D007259 3.3e-35 154.5 190 47.4
SEGI_31268 Sequoiadendron giganteum HOM05D005809 ORTHO05D007259 1.3e-34 152.5 190 48.9
Zm00001eb312980 Zea mays HOM05D005809 ORTHO05D007259 2.8e-34 151.4 189 45.5
Hund01517 Selenicereus undatus HOM05D005809 ORTHO05D007259 1.7e-31 142.1 206 44.7
Mapoly0003s0072 Marchantia polymorpha HOM05D005809 ORTHO05D007259 2.7e-29 134.8 196 42.9
AagrBONN_evm.TU.Sc2ySwM_117.3948 Anthoceros agrestis HOM05D005809 ORTHO05D007259 6.0e-29 133.7 191 40.3
Pp3c8_2960 Physcomitrium patens HOM05D005809 ORTHO05D007259 1.0e-28 132.9 192 41.7
Pp3c16_13530 Physcomitrium patens HOM05D005809 ORTHO05D007259 2.5e-27 128.3 192 39.6
AUR62035200 Chenopodium quinoa HOM05D005809 ORTHO05D007259 2.8e-26 124.8 207 40.6
EL10As1g23143 Beta vulgaris HOM05D005809 ORTHO05D007259 3.1e-25 121.3 160 49.4
SMO361G0248 Selaginella moellendorffii HOM05D005809 ORTHO05D007259 3.1e-25 121.3 209 40.7
SMO361G0343 Selaginella moellendorffii HOM05D005809 ORTHO05D007259 3.1e-25 121.3 192 42.2
Aa31LG1G19310 Aethionema arabicum HOM05D005809 ORTHO05D007259 1.2e-24 119.4 89 64.0
Cc06_g14990 Coffea canephora HOM05D005809 ORTHO05D007259 1.2e-24 119.4 99 62.6
RcHm_v2.0_Chr5g0031291 Rosa chinensis HOM05D005809 ORTHO05D007259 1.2e-24 119.4 138 54.3
Sed0002126 Sechium edule HOM05D005809 ORTHO05D007259 1.9e-22 112.1 127 48.8
CSS0015204 Camellia sinensis var. sinensis HOM05D000853 ORTHO05D000723 4.2e-22 110.9 73 80.8
FAN25G0559 Fragaria x ananassa HOM05D005809 ORTHO05D007259 6.0e-21 107.1 112 57.1
SHI02853 Sapria himalayana HOM05D005809 ORTHO05D007259 1.0e-20 106.3 187 37.4
Oeu007777.1 Olea europaea HOM05D005809 ORTHO05D007259 4.0e-17 94.4 110 45.5
Oeu049715.1 Olea europaea HOM05D005809 ORTHO05D007259 1.5e-16 92.4 110 45.5
Oeu038698.1 Olea europaea HOM05D005809 ORTHO05D007259 7.6e-16 90.1 110 44.5
Oeu017561.1 Olea europaea HOM05D005809 ORTHO05D007259 1.7e-15 89.0 110 44.5
PRCOL_00000214 Prasinoderma coloniale HOM05D005809 ORTHO05D007259 3.8e-15 87.8 203 33.5
FAN21G3780 Fragaria x ananassa HOM05D005809 ORTHO05D007259 6.5e-15 87.0 97 55.7
vmacro11582 Vaccinium macrocarpon HOM05D005809 ORTHO05D010075 5.5e-14 84.0 55 78.2
MD09G1175000 Malus domestica HOM05D005809 ORTHO05D007259 1.6e-13 82.4 92 50.0
CBR_g38078 Chara braunii HOM05D000019 ORTHO05D000048 3.5e-13 81.3 254 26.4
FvH4_3g18530 Fragaria vesca HOM05D005809 ORTHO05D007259 4.6e-13 80.9 78 60.3
FAN11G2737 Fragaria x ananassa HOM05D005809 ORTHO05D007259 4.6e-13 80.9 78 60.3
FAN26G2229 Fragaria x ananassa HOM05D005809 ORTHO05D007259 1.3e-12 79.3 72 65.3
Cc06_g14980 Coffea canephora HOM05D005809 ORTHO05D007259 6.7e-12 77.0 65 58.5
MCO13G469 Micromonas commoda HOM05D005809 ORTHO05D007259 3.3e-11 74.7 192 29.2
Oeu029241.1 Olea europaea HOM05D005809 ORTHO05D007259 7.4e-11 73.6 107 39.3
CANSAT64G1746 Cannabis sativa HOM05D000593 ORTHO05D002268 9.7e-11 73.2 246 26.0
Cre04.g226950 Chlamydomonas reinhardtii HOM05D005809 ORTHO05D007259 4.8e-10 70.9 250 26.0
CANSAT64G1841 Cannabis sativa HOM05D000593 ORTHO05D002268 4.1e-09 67.8 276 25.0
CSS0006571 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 9.0e-09 66.6 69 46.4
CSS0028555 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 2.0e-08 65.5 78 41.0
TWI14G0423 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 3.4e-08 64.7 65 46.2
Atru.chr7.1886 Acer truncatum HOM05D000593 ORTHO05D000562 4.5e-08 64.3 388 22.4
Ca_11910_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 4.5e-08 64.3 255 28.6
CSS0033855 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 7.7e-08 63.5 69 44.9
Ca_15409_v3 Cicer arietinum L. HOM05D000768 ORTHO05D000665 3.8e-07 61.2 76 44.7
Ca_29880_v3 Cicer arietinum L. HOM05D000768 ORTHO05D000665 3.8e-07 61.2 76 44.7
CSS0009535 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 5.0e-07 60.8 69 39.1
Hma1.2p1_1172F.1_g263670 Hydrangea macrophylla HOM05D000593 ORTHO05D002268 8.5e-07 60.1 132 34.1
vmacro11583 Vaccinium macrocarpon HOM05D005809 ORTHO05D426483 1.4e-06 59.3 34 85.3
CSS0003309 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 1.9e-06 58.9 69 39.1
vmacro14527 Vaccinium macrocarpon HOM05D000593 ORTHO05D002268 1.9e-06 58.9 63 42.9
Ca_11017_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 3.2e-06 58.2 177 29.4
CSS0017978 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 4.2e-06 57.8 69 39.1
CSS0038546 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 4.2e-06 57.8 69 39.1
Rhsim06G0090900 Rhododendron simsii HOM05D003216 ORTHO05D002268 4.2e-06 57.8 86 37.2
Actinidia22184 Actinidia chinensis HOM05D000455 ORTHO05D000434 5.5e-06 57.4 73 42.5
Ca_25321_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 5.5e-06 57.4 74 40.5
CSS0037267 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 9.4e-06 56.6 66 43.9
TWI77G0651 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 9.4e-06 56.6 66 39.4
GSVIVG01023955001 Vitis vinifera HOM05D000593 ORTHO05D000562 9.4e-06 56.6 61 41.0


User provided reference genes

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