Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro05322 Vaccinium macrocarpon HOM05D002593 ORTHO05D008082 9.3e-144 513.5 247 100.0
Rhsim10G0121300 Rhododendron simsii HOM05D002593 ORTHO05D008082 3.3e-56 222.6 124 85.5
Actinidia20961 Actinidia chinensis HOM05D002593 ORTHO05D008082 1.1e-51 207.6 125 76.8
GSVIVG01028225001 Vitis vinifera HOM05D002593 ORTHO05D008082 7.3e-48 194.9 134 67.9
QL09p037436 Quercus lobata HOM05D002593 ORTHO05D008082 1.8e-46 190.3 123 71.5
TAR365G0686 Trochodendron aralioides HOM05D002593 ORTHO05D008082 1.8e-46 190.3 135 67.4
CiPaw.08G081500 Carya illinoinensis HOM05D002593 ORTHO05D008082 1.2e-45 187.6 133 66.9
Cfa004926 Carpinus fangiana HOM05D002593 ORTHO05D008082 1.5e-45 187.2 123 70.7
Nn1g08395 Nelumbo nucifera HOM05D002593 ORTHO05D008082 3.8e-44 182.6 131 64.1
Oeu052791.1 Olea europaea HOM05D002593 ORTHO05D008082 6.4e-44 181.8 137 65.7
Eucgr.K00552 Eucalyptus grandis HOM05D002593 ORTHO05D008082 1.1e-43 181.0 132 66.7
Ciclev10021459m.g Citrus clementina HOM05D002593 ORTHO05D008082 7.1e-43 178.3 119 69.7
PSO210G3595 Papaver somniferum HOM05D002593 ORTHO05D008082 2.7e-42 176.4 134 63.4
Cc01_g21690 Coffea canephora HOM05D002593 ORTHO05D008082 3.5e-42 176.0 120 65.0
Aqoxy2G02408 Aquilegia oxysepala HOM05D002593 ORTHO05D008082 6.0e-42 175.3 129 65.1
Nitab4.5_0002103g0100 Nicotiana tabacum HOM05D002593 ORTHO05D008082 7.8e-42 174.9 115 70.4
Manes.01G236200 Manihot esculenta HOM05D002593 ORTHO05D008082 1.3e-41 174.1 134 61.2
Lsat_1_v5_gn_9_7181 Lactuca sativa HOM05D002593 ORTHO05D008082 2.3e-41 173.3 124 69.4
Sopen01g030550 Solanum pennellii HOM05D002593 ORTHO05D008082 2.3e-41 173.3 117 69.2
Cpa.g.sc57.47 Carica papaya HOM05D002593 ORTHO05D008082 3.9e-41 172.6 130 64.6
ECA247G2130 Erigeron canadensis HOM05D005434 ORTHO05D008082 5.1e-41 172.2 115 69.6
PGR142G0326 Punica granatum HOM05D002593 ORTHO05D008082 5.1e-41 172.2 131 63.4
Solyc01g068620.4 Solanum lycopersicum HOM05D002593 ORTHO05D008082 5.1e-41 172.2 115 69.6
Peaxi162Scf00309g00511 Petunia axillaris HOM05D002593 ORTHO05D008082 6.6e-41 171.8 115 68.7
Sc17g0000080 Simmondsia chinensis HOM05D002593 ORTHO05D008082 8.7e-41 171.4 130 60.0
Thecc.01G327600 Theobroma cacao HOM05D002593 ORTHO05D008082 1.1e-40 171.0 130 61.5
Prupe.3G000900 Prunus persica HOM05D002593 ORTHO05D008082 1.9e-40 170.2 123 65.9
CAN.G179.25 Capsicum annuum HOM05D002593 ORTHO05D008082 4.3e-40 169.1 115 68.7
PGSC0003DMG400000842 Solanum tuberosum HOM05D002593 ORTHO05D008082 4.3e-40 169.1 115 67.8
TWI14G0813 Tripterygium wilfordii HOM05D002593 ORTHO05D008082 4.3e-40 169.1 134 59.7
PSO761G0232 Papaver somniferum HOM05D002593 ORTHO05D008082 5.6e-40 168.7 134 61.9
MBI18_g28920_MAGBIO Magnolia biondii HOM05D002593 ORTHO05D008082 1.3e-39 167.5 131 60.3
Potri.014G110600 Populus trichocarpa HOM05D002593 ORTHO05D008082 2.1e-39 166.8 134 59.7
Atru.chr5.835 Acer truncatum HOM05D002593 ORTHO05D008082 3.6e-39 166.0 130 62.3
Lj5g0028161 Lotus japonicus HOM05D002593 ORTHO05D008082 3.6e-39 166.0 118 68.6
SalBow1G1534 Salvia bowleyana HOM05D002593 ORTHO05D008082 3.6e-39 166.0 135 63.7
MSTRG.26210 Avicennia marina HOM05D002593 ORTHO05D008082 8.1e-39 164.9 133 59.4
Potri.002G185100 Populus trichocarpa HOM05D002593 ORTHO05D008082 8.1e-39 164.9 134 59.0
Gohir.A08G122100 Gossypium hirsutum HOM05D002593 ORTHO05D008082 1.4e-38 164.1 132 59.1
Nitab4.5_0001628g0060 Nicotiana tabacum HOM05D003479 ORTHO05D004659 1.4e-38 164.1 142 58.5
Lalb_Chr02g0147271 Lupinus albus HOM05D002593 ORTHO05D008082 1.8e-38 163.7 118 66.9
Phvul.007G207900 Phaseolus vulgaris HOM05D002593 ORTHO05D008082 9.0e-38 161.4 116 65.5
Gohir.D08G143500 Gossypium hirsutum HOM05D002593 ORTHO05D008082 1.5e-37 160.6 132 58.3
Ca_10229_v3 Cicer arietinum L. HOM05D002593 ORTHO05D008082 2.0e-37 160.2 130 62.3
TPR.G3014 Trifolium pratense HOM05D002593 ORTHO05D008082 3.4e-37 159.5 133 58.6
VMungo0720G0036 Vigna mungo HOM05D002593 ORTHO05D008082 3.4e-37 159.5 116 66.4
CsaV3_6G000300 Cucumis sativus L. HOM05D002593 ORTHO05D008082 4.4e-37 159.1 125 61.6
Medtr1g085550 Medicago truncatula HOM05D002593 ORTHO05D008082 7.6e-37 158.3 133 59.4
THA.LOC104815911 Tarenaya hassleriana HOM05D002593 ORTHO05D008082 7.6e-37 158.3 130 57.7
Gorai.004G147900 Gossypium raimondii HOM05D002593 ORTHO05D008082 9.9e-37 157.9 132 57.6
MELO3C021224.2 Cucumis melo HOM05D002593 ORTHO05D008082 1.3e-36 157.5 121 62.8
Glyma.10G139600 Glycine max HOM05D002593 ORTHO05D008082 1.7e-36 157.1 118 62.7
Sabra02G0130800 Salix brachista HOM05D002593 ORTHO05D008082 1.7e-36 157.1 134 56.0
SGA_v2.0_scaffold12G06079 Striga asiatica HOM05D002593 ORTHO05D008082 2.2e-36 156.8 131 62.6
Migut.K00221 Erythranthe guttata HOM05D002593 ORTHO05D008082 4.9e-36 155.6 130 59.2
Thhalv10028817m.g Eutrema salsugineum HOM05D002593 ORTHO05D008082 8.4e-36 154.8 130 57.7
HanXRQChr10g0286511 Helianthus annuus HOM05D002593 ORTHO05D008082 8.4e-36 154.8 117 64.1
Gohir.A07G132500 Gossypium hirsutum HOM05D002593 ORTHO05D008082 1.4e-35 154.1 129 57.4
Gohir.D07G136800 Gossypium hirsutum HOM05D002593 ORTHO05D008082 1.4e-35 154.1 130 56.2
Gorai.001G148800 Gossypium raimondii HOM05D002593 ORTHO05D008082 1.4e-35 154.1 130 56.2
MD09G1291800 Malus domestica HOM05D002593 ORTHO05D008082 1.4e-35 154.1 120 61.7
HPP92_021910 Vanilla planifolia HOM05D002593 ORTHO05D008082 1.4e-35 154.1 130 54.6
Sabra14G0081400 Salix brachista HOM05D002593 ORTHO05D008082 2.4e-35 153.3 157 51.6
CARHR250020 Cardamine hirsuta HOM05D002593 ORTHO05D008082 3.2e-35 152.9 130 56.9
AT4G01650 Arabidopsis thaliana HOM05D002593 ORTHO05D008082 4.2e-35 152.5 130 57.7
AL6G51700 Arabidopsis lyrata HOM05D002593 ORTHO05D008082 7.1e-35 151.8 130 56.9
Hund08525 Selenicereus undatus HOM05D002593 ORTHO05D008082 7.1e-35 151.8 138 54.3
ClCG06G004130 Citrullus lanatus HOM05D002593 ORTHO05D008082 9.3e-35 151.4 121 61.2
Sp6g01540 Schrenkiella parvula HOM05D002593 ORTHO05D008082 9.3e-35 151.4 130 57.7
Hund15465 Selenicereus undatus HOM05D002593 ORTHO05D008082 9.3e-35 151.4 119 61.3
CDE11G0220 Ceratophyllum demersum HOM05D002593 ORTHO05D008082 1.2e-34 151.0 132 56.8
BcaC04g24081 Brassica carinata HOM05D002593 ORTHO05D008082 1.6e-34 150.6 130 57.7
C09p01260 Brassica napus HOM05D002593 ORTHO05D008082 1.6e-34 150.6 130 57.7
BolC9t53060H Brassica oleracea HOM05D002593 ORTHO05D008082 1.6e-34 150.6 130 57.7
Carub.0006s3556 Capsella rubella HOM05D002593 ORTHO05D008082 1.6e-34 150.6 130 56.2
BcaB01g02125 Brassica carinata HOM05D002593 ORTHO05D008082 2.1e-34 150.2 130 57.7
FvH4_1g26070 Fragaria vesca HOM05D002593 ORTHO05D008082 2.1e-34 150.2 130 56.2
FAN19G0602 Fragaria x ananassa HOM05D002593 ORTHO05D008082 2.1e-34 150.2 130 56.2
A09p01180 Brassica napus HOM05D002593 ORTHO05D008082 2.7e-34 149.8 130 57.7
BraA09t35788Z Brassica rapa HOM05D002593 ORTHO05D008082 2.7e-34 149.8 130 57.7
BcaB01g02375 Brassica carinata HOM05D002593 ORTHO05D008082 3.5e-34 149.4 130 56.9
Sed0017127 Sechium edule HOM05D002593 ORTHO05D008082 4.6e-34 149.1 126 58.7
arahy.Tifrunner.gnm1.ann1.BAG6CY Arachis hypogaea HOM05D002593 ORTHO05D008082 6.0e-34 148.7 121 59.5
BcaC01g06808 Brassica carinata HOM05D002593 ORTHO05D008082 1.0e-33 147.9 130 56.2
A03p31530 Brassica napus HOM05D002593 ORTHO05D008082 1.0e-33 147.9 130 56.2
C03p38510 Brassica napus HOM05D002593 ORTHO05D008082 1.0e-33 147.9 130 56.2
BolC3t16125H Brassica oleracea HOM05D002593 ORTHO05D008082 1.0e-33 147.9 130 56.2
BraA03t12332Z Brassica rapa HOM05D002593 ORTHO05D008082 1.0e-33 147.9 130 56.2
arahy.Tifrunner.gnm1.ann1.EK7H7E Arachis hypogaea HOM05D002593 ORTHO05D008082 1.3e-33 147.5 117 60.7
RcHm_v2.0_Chr3g0485541 Rosa chinensis HOM05D002593 ORTHO05D008082 1.3e-33 147.5 130 56.2
unitig_0.g2672 Utricularia gibba HOM05D002593 ORTHO05D008082 1.3e-33 147.5 133 51.9
FAN23G1996 Fragaria x ananassa HOM05D002593 ORTHO05D008082 1.7e-33 147.1 130 55.4
FAN23G3081 Fragaria x ananassa HOM05D002593 ORTHO05D008082 1.7e-33 147.1 130 55.4
CDE05G1031 Ceratophyllum demersum HOM05D002593 ORTHO05D008082 2.3e-33 146.7 132 56.1
FAN28G0491 Fragaria x ananassa HOM05D002593 ORTHO05D008082 1.9e-32 143.7 130 54.6
ATR0796G107 Amborella trichopoda HOM05D002593 ORTHO05D008082 4.3e-32 142.5 121 57.9
FAN26G3134 Fragaria x ananassa HOM05D002593 ORTHO05D008082 4.3e-32 142.5 126 55.6
THA.LOC104801332 Tarenaya hassleriana HOM05D002593 ORTHO05D008082 4.3e-32 142.5 131 54.2
Aa31sc2117G10 Aethionema arabicum HOM05D002593 ORTHO05D008082 6.2e-31 138.7 128 49.2
Aa31LG5G1360 Aethionema arabicum HOM05D002593 ORTHO05D008082 4.0e-30 136.0 128 48.4
Os01g0971700 Oryza sativa ssp. japonica HOM05D002593 ORTHO05D008082 4.0e-30 136.0 130 50.0
unitig_748.g7215 Utricularia gibba HOM05D002593 ORTHO05D008082 5.8e-29 132.1 131 51.1
Atru.chr5.836 Acer truncatum HOM05D002593 ORTHO05D008082 2.3e-25 120.2 128 46.9
Mapoly0125s0022 Marchantia polymorpha HOM05D002593 ORTHO05D008082 6.7e-25 118.6 120 49.2
THA.LOC104801335 Tarenaya hassleriana HOM05D002593 ORTHO05D008082 8.7e-25 118.2 115 53.0
QL09p023342 Quercus lobata HOM05D002593 ORTHO05D008082 1.1e-22 111.3 57 86.0
QL93p2009_0021 Quercus lobata HOM05D002593 ORTHO05D008082 1.1e-22 111.3 57 86.0
Dinv33183 Davidia involucrata HOM05D002593 ORTHO05D008082 1.4e-22 110.9 71 71.8
TWI23G0423 Tripterygium wilfordii HOM05D002593 ORTHO05D008082 5.8e-21 105.5 71 67.6
DCAR_018238 Daucus carota HOM05D002593 ORTHO05D008082 7.6e-21 105.1 71 66.2
SMO339G0046 Selaginella moellendorffii HOM05D002593 ORTHO05D008082 2.2e-20 103.6 116 48.3
AagrBONN_evm.TU.Sc2ySwM_344.978 Anthoceros agrestis HOM05D002593 ORTHO05D008082 3.8e-20 102.8 110 47.3
CSS0008833 Camellia sinensis var. sinensis HOM05D002593 ORTHO05D008082 1.1e-19 101.3 63 73.0
Psat6g157840 Pisum sativum HOM05D002593 ORTHO05D008082 1.4e-19 100.9 71 64.8
Pp3c6_14570 Physcomitrium patens HOM05D002593 ORTHO05D008082 8.7e-17 91.7 110 39.1
COL.COLO4_23101 Corchorus olitorius HOM05D002593 ORTHO05D008082 1.5e-16 90.9 72 56.9
COL.COLO4_23100 Corchorus olitorius HOM05D002593 ORTHO05D008082 2.4e-14 83.6 60 63.3
Zm00001eb139840 Zea mays HOM05D002593 ORTHO05D008082 2.6e-13 80.1 62 56.5
PRCOL_00004531 Prasinoderma coloniale HOM05D003684 ORTHO05D028742 1.9e-11 73.9 151 29.1
SEGI_17807 Sequoiadendron giganteum HOM05D002593 ORTHO05D008082 1.8e-09 67.4 59 54.2
Cre02.g107750 Chlamydomonas reinhardtii HOM05D002593 ORTHO05D008082 1.5e-08 64.3 96 35.4
CBR_g48801 Chara braunii HOM05D002593 ORTHO05D006476 1.1e-06 58.2 101 35.6
Lj1A109G43 Lonicera japonica HOM05D002593 ORTHO05D006476 3.1e-06 56.6 83 33.7
CiPaw.07G076000 Carya illinoinensis HOM05D002593 ORTHO05D006476 5.3e-06 55.8 91 31.9
RcHm_v2.0_Chr5g0020561 Rosa chinensis HOM05D002593 ORTHO05D006476 5.3e-06 55.8 103 33.0
Eucgr.I00052 Eucalyptus grandis HOM05D002593 ORTHO05D006476 9.0e-06 55.1 83 33.7
FAN25G3668 Fragaria x ananassa HOM05D002593 ORTHO05D006476 9.0e-06 55.1 98 32.7


User provided reference genes

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