Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro05276 Vaccinium macrocarpon HOM05D004267 ORTHO05D005267 1.4e-234 815.8 398 100.0
Rhsim07G0144100 Rhododendron simsii HOM05D004267 ORTHO05D005267 1.2e-84 317.8 172 87.2
CSS0026627 Camellia sinensis var. sinensis HOM05D004267 ORTHO05D005267 4.9e-78 295.8 188 75.5
CSS0030161 Camellia sinensis var. sinensis HOM05D004267 ORTHO05D000002 3.2e-77 293.1 218 66.5
Actinidia18200 Actinidia chinensis HOM05D004267 ORTHO05D005267 7.3e-74 282.0 171 77.2
Actinidia14699 Actinidia chinensis HOM05D004267 ORTHO05D005267 1.3e-73 281.2 171 76.6
Psat6g019000 Pisum sativum HOM05D004267 ORTHO05D005267 3.6e-73 279.6 174 74.1
Ca_13187_v3 Cicer arietinum L. HOM05D004267 ORTHO05D005267 1.4e-72 277.7 174 72.4
Lj5g0002830 Lotus japonicus HOM05D004267 ORTHO05D005267 3.4e-71 273.1 174 71.3
Cfa017926 Carpinus fangiana HOM05D004267 ORTHO05D005267 7.6e-71 271.9 174 71.8
Glyma.17G231200 Glycine max HOM05D004267 ORTHO05D005267 7.6e-71 271.9 174 71.3
GSVIVG01035339001 Vitis vinifera HOM05D004267 ORTHO05D005267 7.6e-71 271.9 174 71.8
VMungo0647G2384 Vigna mungo HOM05D004267 ORTHO05D005267 1.3e-70 271.2 174 70.1
Haze_18224 Corylus avellana HOM05D004267 ORTHO05D005267 1.7e-70 270.8 174 70.7
Hma1.2p1_1213F.1_g267510 Hydrangea macrophylla HOM05D004267 ORTHO05D005267 1.7e-70 270.8 174 73.6
TAR636G0904 Trochodendron aralioides HOM05D004267 ORTHO05D005267 2.2e-70 270.4 174 73.6
CiPaw.15G042300 Carya illinoinensis HOM05D004267 ORTHO05D005267 2.9e-70 270.0 174 70.7
Phvul.001G033101 Phaseolus vulgaris HOM05D004267 ORTHO05D005267 2.9e-70 270.0 174 70.1
Glyma.14G092300 Glycine max HOM05D004267 ORTHO05D005267 3.8e-70 269.6 174 70.1
QL02p001694 Quercus lobata HOM05D004267 ORTHO05D005267 3.8e-70 269.6 173 70.5
TPR.G12986 Trifolium pratense HOM05D004267 ORTHO05D005267 4.9e-70 269.2 174 71.8
MSTRG.1674 Avicennia marina HOM05D004267 ORTHO05D005267 1.1e-69 268.1 174 70.7
Lalb_Chr14g0367901 Lupinus albus HOM05D004267 ORTHO05D005267 5.4e-69 265.8 174 70.7
ClCG08G016900 Citrullus lanatus HOM05D004267 ORTHO05D005267 3.5e-68 263.1 176 69.3
Duzib187G0506 Durio zibethinus HOM05D004267 ORTHO05D005267 3.5e-68 263.1 174 70.7
Medtr1g016900 Medicago truncatula HOM05D004267 ORTHO05D005267 3.5e-68 263.1 174 69.5
Oeu036354.1 Olea europaea HOM05D004267 ORTHO05D005267 6.0e-68 262.3 174 70.7
Lsat_1_v5_gn_3_28241 Lactuca sativa HOM05D004267 ORTHO05D005267 7.9e-68 261.9 171 69.6
Duzib168G1102 Durio zibethinus HOM05D004267 ORTHO05D005267 1.0e-67 261.5 174 69.5
Lj8A557T6 Lonicera japonica HOM05D004267 ORTHO05D005267 1.0e-67 261.5 172 68.0
Nn8g38967 Nelumbo nucifera HOM05D004267 ORTHO05D005267 1.0e-67 261.5 174 70.7
SGA_v2.0_scaffold88G27217 Striga asiatica HOM05D004267 ORTHO05D005267 1.3e-67 261.2 174 69.5
Thecc.09G050400 Theobroma cacao HOM05D004267 ORTHO05D005267 2.3e-67 260.4 174 69.0
Ciclev10009729m.g Citrus clementina HOM05D004267 ORTHO05D005267 6.6e-67 258.8 173 69.4
Atru.chr7.2026 Acer truncatum HOM05D004267 ORTHO05D005267 1.1e-66 258.1 174 69.0
Sed0007787 Sechium edule HOM05D004267 ORTHO05D005267 1.9e-66 257.3 174 68.4
HanXRQChr17g0539351 Helianthus annuus HOM05D004267 ORTHO05D005267 2.5e-66 256.9 171 69.0
CsaV3_2G025720 Cucumis sativus L. HOM05D004267 ORTHO05D005267 3.3e-66 256.5 174 68.4
Manes.03G046100 Manihot esculenta HOM05D004267 ORTHO05D005267 4.3e-66 256.1 174 67.8
Cc08_g10140 Coffea canephora HOM05D004267 ORTHO05D005267 7.3e-66 255.4 172 68.0
SalBow4G2144 Salvia bowleyana HOM05D004267 ORTHO05D005267 1.6e-65 254.2 174 67.8
Gohir.A06G090500 Gossypium hirsutum HOM05D004267 ORTHO05D005267 2.8e-65 253.4 174 67.8
Gohir.D06G089500 Gossypium hirsutum HOM05D004267 ORTHO05D005267 2.8e-65 253.4 174 67.8
Gorai.010G103400 Gossypium raimondii HOM05D004267 ORTHO05D005267 2.8e-65 253.4 174 67.8
TWI34G0953 Tripterygium wilfordii HOM05D004267 ORTHO05D005267 4.8e-65 252.7 174 67.2
BraA03t15208Z Brassica rapa HOM05D004267 ORTHO05D005267 6.2e-65 252.3 178 68.0
Migut.A00159 Erythranthe guttata HOM05D004267 ORTHO05D005267 6.2e-65 252.3 174 67.8
A03p61690 Brassica napus HOM05D004267 ORTHO05D005267 8.1e-65 251.9 175 68.6
C07p59420 Brassica napus HOM05D004267 ORTHO05D005267 8.1e-65 251.9 175 68.6
BolC1t00557H Brassica oleracea HOM05D004267 ORTHO05D005267 8.1e-65 251.9 175 68.0
BraA01t00509Z Brassica rapa HOM05D004267 ORTHO05D005267 8.1e-65 251.9 175 68.0
Eucgr.C00632 Eucalyptus grandis HOM05D004267 ORTHO05D005267 8.1e-65 251.9 174 66.7
arahy.Tifrunner.gnm1.ann1.35PLQF Arachis hypogaea HOM05D004267 ORTHO05D005267 1.4e-64 251.1 173 67.1
C01p05770 Brassica napus HOM05D004267 ORTHO05D005267 1.4e-64 251.1 175 68.0
A01p05350 Brassica napus HOM05D004267 ORTHO05D005267 2.4e-64 250.4 175 67.4
Prupe.1G415500 Prunus persica HOM05D004267 ORTHO05D005267 3.1e-64 250.0 174 65.5
PGR031G1882 Punica granatum HOM05D004267 ORTHO05D005267 3.1e-64 250.0 174 66.7
Thhalv10025837m.g Eutrema salsugineum HOM05D004267 ORTHO05D005267 9.0e-64 248.4 195 63.6
Sp7g30710 Schrenkiella parvula HOM05D004267 ORTHO05D005267 1.2e-63 248.1 175 67.4
Gorai.009G047300 Gossypium raimondii HOM05D004267 ORTHO05D005267 1.5e-63 247.7 174 65.5
BcaC09g52093 Brassica carinata HOM05D004267 ORTHO05D005267 2.0e-63 247.3 175 66.9
Gohir.A05G044300 Gossypium hirsutum HOM05D004267 ORTHO05D005267 2.0e-63 247.3 174 64.9
AL7G18760 Arabidopsis lyrata HOM05D004267 ORTHO05D005267 3.4e-63 246.5 175 67.4
Carub.0007s0755 Capsella rubella HOM05D004267 ORTHO05D005267 3.4e-63 246.5 175 67.4
Nitab4.5_0021628g0010 Nicotiana tabacum HOM05D004267 ORTHO05D005267 3.4e-63 246.5 174 66.1
TAR624G0139 Trochodendron aralioides HOM05D004267 ORTHO05D005267 3.4e-63 246.5 175 65.1
AT4G32930 Arabidopsis thaliana HOM05D004267 ORTHO05D005267 4.5e-63 246.1 175 66.9
DCAR_000778 Daucus carota HOM05D004267 ORTHO05D005267 7.6e-63 245.4 172 64.0
Aa31sc248G70 Aethionema arabicum HOM05D004267 ORTHO05D005267 9.9e-63 245.0 175 66.3
Dinv27959 Davidia involucrata HOM05D004267 ORTHO05D005267 1.3e-62 244.6 220 55.5
Peaxi162Scf00247g00612 Petunia axillaris HOM05D004267 ORTHO05D005267 1.7e-62 244.2 174 65.5
CANSAT01G0851 Cannabis sativa HOM05D004267 ORTHO05D005267 8.4e-62 241.9 174 63.8
CANSAT01G1320 Cannabis sativa HOM05D004267 ORTHO05D005267 8.4e-62 241.9 174 63.8
RcHm_v2.0_Chr6g0310421 Rosa chinensis HOM05D004267 ORTHO05D005267 8.4e-62 241.9 173 63.6
Potri.006G233500 Populus trichocarpa HOM05D004267 ORTHO05D005267 1.1e-61 241.5 174 62.6
Aa31LG2G6480 Aethionema arabicum HOM05D004267 ORTHO05D005267 3.2e-61 240.0 175 66.9
PSO210G6502 Papaver somniferum HOM05D004267 ORTHO05D005267 7.1e-61 238.8 174 62.1
arahy.Tifrunner.gnm1.ann1.97AHJW Arachis hypogaea HOM05D004267 ORTHO05D005267 1.6e-60 237.7 203 57.6
PSO210G4696 Papaver somniferum HOM05D004267 ORTHO05D005267 2.7e-60 236.9 174 61.5
Solyc11g070050.2 Solanum lycopersicum HOM05D004267 ORTHO05D005267 7.9e-60 235.3 174 62.1
Sopen11g028730 Solanum pennellii HOM05D004267 ORTHO05D005267 7.9e-60 235.3 174 62.1
THA.LOC104803799 Tarenaya hassleriana HOM05D004267 ORTHO05D005267 7.9e-60 235.3 174 61.5
FAN20G1958 Fragaria x ananassa HOM05D004267 ORTHO05D005267 2.3e-59 233.8 173 61.3
ATR0789G016 Amborella trichopoda HOM05D004267 ORTHO05D005267 3.0e-59 233.4 174 63.2
Sc06g0000890 Simmondsia chinensis HOM05D004267 ORTHO05D005267 3.0e-59 233.4 174 62.1
PGSC0003DMG400025516 Solanum tuberosum HOM05D004267 ORTHO05D005267 3.0e-59 233.4 174 61.5
Aqoxy7G03943 Aquilegia oxysepala HOM05D004267 ORTHO05D005267 6.7e-59 232.3 166 63.3
FAN24G1314 Fragaria x ananassa HOM05D004267 ORTHO05D005267 8.7e-59 231.9 173 60.7
COL.COLO4_21022 Corchorus olitorius HOM05D004267 ORTHO05D005267 1.1e-58 231.5 189 58.7
FvH4_2g32280 Fragaria vesca HOM05D004267 ORTHO05D005267 1.1e-58 231.5 173 60.7
unitig_578.g16576 Utricularia gibba HOM05D004267 ORTHO05D005267 5.6e-58 229.2 171 62.6
Sc09g0009630 Simmondsia chinensis HOM05D004267 ORTHO05D005267 2.1e-57 227.3 174 58.6
ECA246G5265 Erigeron canadensis HOM05D004267 ORTHO05D005267 1.4e-56 224.6 171 60.2
FAN15G3631 Fragaria x ananassa HOM05D004267 ORTHO05D005267 1.8e-56 224.2 186 57.5
CAN.G309.57 Capsicum annuum HOM05D004267 ORTHO05D005267 4.0e-56 223.0 175 61.1
MBI04_g12184_MAGBIO Magnolia biondii HOM05D004267 ORTHO05D005267 1.2e-55 221.5 196 56.6
Sabra06G0181900 Salix brachista HOM05D004267 ORTHO05D005267 4.5e-55 219.5 226 47.8
SEGI_14756 Sequoiadendron giganteum HOM05D004267 ORTHO05D005267 7.6e-55 218.8 174 60.9
Solyc11g070060.2 Solanum lycopersicum HOM05D004267 ORTHO05D005267 7.6e-55 218.8 174 58.0
Hund03363 Selenicereus undatus HOM05D004267 ORTHO05D005267 1.0e-54 218.4 189 55.6
EL10Ac2g03945 Beta vulgaris HOM05D004267 ORTHO05D005267 1.1e-53 214.9 174 57.5
Os01g0565600 Oryza sativa ssp. japonica HOM05D004267 ORTHO05D005267 1.9e-53 214.2 173 59.0
HPP92_004580 Vanilla planifolia HOM05D004267 ORTHO05D005267 7.9e-52 208.8 173 57.8
Zm00001eb356880 Zea mays HOM05D004267 ORTHO05D005267 7.9e-52 208.8 172 57.6
MELO3C010766.2 Cucumis melo HOM05D004267 ORTHO05D005267 3.0e-51 206.8 144 66.7
BcaNung02146 Brassica carinata HOM05D004267 ORTHO05D005267 1.6e-49 201.1 134 67.9
Aqoxy408s001 Aquilegia oxysepala HOM05D004267 ORTHO05D005267 4.8e-49 199.5 133 69.2
RcHm_v2.0_Chr6g0310431 Rosa chinensis HOM05D004267 ORTHO05D005267 6.3e-49 199.1 171 56.1
Hund19479 Selenicereus undatus HOM05D004267 ORTHO05D005267 1.8e-48 197.6 176 53.4
Nitab4.5_0000664g0030 Nicotiana tabacum HOM05D006502 ORTHO05D005267 5.8e-47 192.6 138 63.8
CARHR240940 Cardamine hirsuta HOM05D004267 ORTHO05D005267 3.8e-46 189.9 141 64.5
FAN27G1738 Fragaria x ananassa HOM05D004267 ORTHO05D005267 1.1e-45 188.3 199 48.7
Gohir.D05G045900 Gossypium hirsutum HOM05D004267 ORTHO05D005267 3.2e-45 186.8 172 52.3
FvH4_2g32260 Fragaria vesca HOM05D004267 ORTHO05D005267 5.1e-43 179.5 169 52.7
DCAR_004448 Daucus carota HOM05D004267 ORTHO05D005267 6.7e-43 179.1 171 48.0
Nn6g35383 Nelumbo nucifera HOM05D004267 ORTHO05D005267 5.7e-42 176.0 135 64.4
DCAR_004449 Daucus carota HOM05D004267 ORTHO05D005267 7.4e-42 175.6 170 50.0
Mapoly0044s0101 Marchantia polymorpha HOM05D004267 ORTHO05D005267 3.7e-41 173.3 174 46.6
Sopen11g028740 Solanum pennellii HOM05D004267 ORTHO05D005267 1.1e-40 171.8 172 47.1
Pp3c5_10040 Physcomitrium patens HOM05D004267 ORTHO05D005267 1.5e-39 167.9 187 48.7
MD08G1073900 Malus domestica HOM05D004267 ORTHO05D005267 4.5e-39 166.4 176 46.0
Lsat_1_v5_gn_5_67680 Lactuca sativa HOM05D004267 ORTHO05D005267 5.9e-39 166.0 137 59.9
arahy.Tifrunner.gnm1.ann1.BB3MLG Arachis hypogaea HOM05D004267 ORTHO05D005267 1.0e-38 165.2 97 73.2
arahy.Tifrunner.gnm1.ann1.JED36R Arachis hypogaea HOM05D004267 ORTHO05D005267 1.0e-38 165.2 97 73.2
CDE07G0102 Ceratophyllum demersum HOM05D004267 ORTHO05D005267 2.2e-38 164.1 124 61.3
FAN15G2319 Fragaria x ananassa HOM05D004267 ORTHO05D005267 1.9e-37 161.0 155 52.3
SMO117G0066 Selaginella moellendorffii HOM05D004267 ORTHO05D005267 1.8e-35 154.5 158 50.0
Cpa.g.sc78.12 Carica papaya HOM05D004267 ORTHO05D005267 5.1e-35 152.9 97 67.0
FAN24G0417 Fragaria x ananassa HOM05D004267 ORTHO05D005267 6.7e-35 152.5 144 51.4
AUR62040201 Chenopodium quinoa HOM05D004267 ORTHO05D005267 2.8e-33 147.1 174 44.8
AUR62043052 Chenopodium quinoa HOM05D004267 ORTHO05D005267 6.3e-33 146.0 140 50.0
CDE07G1388 Ceratophyllum demersum HOM05D004267 ORTHO05D005267 7.7e-31 139.0 124 54.0
Rhsim01G0086000 Rhododendron simsii HOM05D004267 ORTHO05D005267 7.7e-31 139.0 84 77.4
CBR_g18691 Chara braunii HOM05D004267 ORTHO05D005267 2.2e-30 137.5 171 42.7
AUR62009204 Chenopodium quinoa HOM05D004267 ORTHO05D005267 2.2e-30 137.5 170 43.5
Zm00001eb159830 Zea mays HOM05D004267 ORTHO05D005267 2.7e-28 130.6 96 60.4
AagrBONN_evm.TU.Sc2ySwM_344.4469 Anthoceros agrestis HOM05D004267 ORTHO05D005267 4.7e-28 129.8 138 48.6
BcaC07g42315 Brassica carinata HOM05D004267 ORTHO05D005267 1.1e-26 125.2 190 41.6
Oeu057699.1 Olea europaea HOM05D004267 ORTHO05D005267 1.3e-22 111.7 112 53.6
Aqoxy7G03867 Aquilegia oxysepala HOM05D004267 ORTHO05D005267 1.7e-22 111.3 139 39.6
Peaxi162Scf00545g00002 Petunia axillaris HOM05D004267 ORTHO05D005267 5.0e-22 109.8 116 49.1
GSVIVG01016838001 Vitis vinifera HOM05D004267 ORTHO05D005267 1.1e-21 108.6 169 38.5
GSVIVG01016840001 Vitis vinifera HOM05D004267 ORTHO05D005267 1.1e-21 108.6 169 39.1
Peaxi162Scf00545g00001 Petunia axillaris HOM05D004267 ORTHO05D005267 6.7e-19 99.4 106 50.0
Aqoxy7G03891 Aquilegia oxysepala HOM05D004267 ORTHO05D005267 8.8e-19 99.0 86 50.0
Cre09.g395800 Chlamydomonas reinhardtii HOM05D004267 ORTHO05D005267 1.6e-12 78.2 173 30.1
Nitab4.5_0001927g0070 Nicotiana tabacum HOM05D004267 ORTHO05D005267 2.6e-10 70.9 60 48.3
Nitab4.5_0001927g0060 Nicotiana tabacum HOM05D004267 ORTHO05D005267 1.7e-09 68.2 124 31.5
AUR62022800 Chenopodium quinoa HOM05D004267 ORTHO05D005267 1.4e-08 65.1 73 46.6
Thecc.06G107200 Theobroma cacao HOM05D004267 ORTHO05D044750 2.4e-08 64.3 127 32.3
AUR62002213 Chenopodium quinoa HOM05D004267 ORTHO05D005267 5.4e-08 63.2 72 45.8
AUR62018016 Chenopodium quinoa HOM05D004267 ORTHO05D005267 5.4e-08 63.2 72 45.8
BcaB05g24144 Brassica carinata HOM05D000010 ORTHO05D000063 1.6e-07 61.6 47 63.8
VMungo1196G0001 Vigna mungo HOM05D005620 ORTHO05D005267 3.5e-07 60.5 39 64.1
AUR62010512 Chenopodium quinoa HOM05D004267 ORTHO05D005267 4.5e-07 60.1 64 48.4
COL.COLO4_30599 Corchorus olitorius HOM05D004267 ORTHO05D044750 7.7e-07 59.3 140 30.0
AUR62034857 Chenopodium quinoa HOM05D004267 ORTHO05D005267 1.0e-06 58.9 72 44.4
CAN.G1143.36 Capsicum annuum HOM05D001836 ORTHO05D001519 1.3e-06 58.5 54 46.3
BcaB04g19156 Brassica carinata HOM05D004267 ORTHO05D096112 1.7e-06 58.2 39 69.2
AUR62044607 Chenopodium quinoa HOM05D004267 ORTHO05D005267 2.2e-06 57.8 72 43.1
AUR62036408 Chenopodium quinoa HOM05D001707 ORTHO05D001694 3.8e-06 57.0 44 54.5
AUR62007889 Chenopodium quinoa HOM05D004267 ORTHO05D005267 8.5e-06 55.8 64 46.9


User provided reference genes

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