Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro05269 Vaccinium macrocarpon HOM05D005768 ORTHO05D007100 2.3e-257 891.7 450 100.0
vmacro07473 Vaccinium macrocarpon HOM05D005768 ORTHO05D007100 7.5e-75 285.4 178 85.4
Rhsim07G0145000 Rhododendron simsii HOM05D005768 ORTHO05D007100 1.5e-67 261.2 178 80.3
CSS0002565 Camellia sinensis var. sinensis HOM05D005768 ORTHO05D007100 8.3e-58 228.8 178 72.5
Actinidia18208 Actinidia chinensis HOM05D005768 ORTHO05D007100 3.2e-57 226.9 187 69.5
Dinv27944 Davidia involucrata HOM05D005768 ORTHO05D007100 1.1e-52 211.8 178 67.4
Hma1.2p1_0442F.1_g153950 Hydrangea macrophylla HOM05D005768 ORTHO05D007100 1.9e-49 201.1 178 62.4
GSVIVG01035325001 Vitis vinifera HOM05D005768 ORTHO05D007100 2.1e-48 197.6 178 62.4
Atru.chr4.1221 Acer truncatum HOM05D005768 ORTHO05D007100 1.0e-47 195.3 178 61.8
Hma1.2p1_0603F.1_g187720 Hydrangea macrophylla HOM05D005768 ORTHO05D007100 1.0e-47 195.3 172 62.2
Sabra06G0183200 Salix brachista HOM05D005768 ORTHO05D007100 3.0e-47 193.7 179 58.7
Ciclev10022280m.g Citrus clementina HOM05D005768 ORTHO05D007100 3.9e-47 193.4 179 60.3
Potri.006G234800 Populus trichocarpa HOM05D005768 ORTHO05D007100 5.1e-47 193.0 179 59.2
Atru.chr7.2675 Acer truncatum HOM05D005768 ORTHO05D007100 8.6e-47 192.2 167 64.7
Manes.02G043100 Manihot esculenta HOM05D005768 ORTHO05D007100 1.5e-46 191.4 178 60.1
CiPaw.07G201500 Carya illinoinensis HOM05D005768 ORTHO05D007100 1.2e-45 188.3 165 63.6
Aqoxy5G03966 Aquilegia oxysepala HOM05D005768 ORTHO05D007100 1.1e-44 185.3 185 57.8
FAN20G2834 Fragaria x ananassa HOM05D005768 ORTHO05D007100 5.2e-44 183.0 171 60.2
TWI34G0524 Tripterygium wilfordii HOM05D005768 ORTHO05D007100 5.2e-44 183.0 168 58.9
FAN27G1715 Fragaria x ananassa HOM05D005768 ORTHO05D007100 8.9e-44 182.2 171 59.6
Prupe.1G443600 Prunus persica HOM05D005768 ORTHO05D007100 2.0e-43 181.0 161 62.1
RcHm_v2.0_Chr6g0306801 Rosa chinensis HOM05D005768 ORTHO05D007100 2.0e-43 181.0 171 59.6
COL.COLO4_21009 Corchorus olitorius HOM05D005768 ORTHO05D007100 2.6e-43 180.6 164 60.4
HanXRQChr03g0078001 Helianthus annuus HOM05D005768 ORTHO05D007100 3.4e-43 180.3 159 64.8
Thecc.09G049100 Theobroma cacao HOM05D005768 ORTHO05D007100 4.4e-43 179.9 161 62.1
THA.LOC104812009 Tarenaya hassleriana HOM05D005768 ORTHO05D007100 7.6e-43 179.1 180 57.2
TAR383G0888 Trochodendron aralioides HOM05D005768 ORTHO05D007100 9.9e-43 178.7 187 56.1
Duzib168G0475 Durio zibethinus HOM05D005768 ORTHO05D007100 1.3e-42 178.3 158 62.7
Gohir.D07G024000 Gossypium hirsutum HOM05D005768 ORTHO05D007100 1.3e-42 178.3 162 62.3
Gorai.001G024700 Gossypium raimondii HOM05D005768 ORTHO05D007100 1.3e-42 178.3 162 62.3
TAR624G0371 Trochodendron aralioides HOM05D005768 ORTHO05D007100 1.3e-42 178.3 178 58.4
PGSC0003DMG401025462 Solanum tuberosum HOM05D005768 ORTHO05D007100 4.9e-42 176.4 178 56.7
Eucgr.C02988 Eucalyptus grandis HOM05D005768 ORTHO05D007100 1.1e-41 175.3 187 56.1
PGR044G0118 Punica granatum HOM05D005768 ORTHO05D007100 1.1e-41 175.3 168 57.1
Sopen08g019690 Solanum pennellii HOM05D005768 ORTHO05D007100 1.1e-41 175.3 178 56.2
Solyc08g066030.3 Solanum lycopersicum HOM05D005768 ORTHO05D007100 1.4e-41 174.9 178 56.2
TWI63G1351 Tripterygium wilfordii HOM05D005768 ORTHO05D007100 1.4e-41 174.9 174 56.3
CANSAT56G2391 Cannabis sativa HOM05D005768 ORTHO05D007100 1.9e-41 174.5 178 56.7
Cc00_g09250 Coffea canephora HOM05D005768 ORTHO05D007100 1.9e-41 174.5 169 58.6
MD08G1109000 Malus domestica HOM05D005768 ORTHO05D007100 2.4e-41 174.1 155 61.9
Cpa.g.sc1868.1 Carica papaya HOM05D005768 ORTHO05D007100 9.3e-41 172.2 171 57.3
PSO063G0290 Papaver somniferum HOM05D005768 ORTHO05D007100 9.3e-41 172.2 171 57.3
Peaxi162Scf00699g00655 Petunia axillaris HOM05D005768 ORTHO05D007100 1.2e-40 171.8 168 60.1
Nitab4.5_0000318g0060 Nicotiana tabacum HOM05D005768 ORTHO05D007100 1.6e-40 171.4 170 57.6
AT1G20890 Arabidopsis thaliana HOM05D005768 ORTHO05D007100 2.7e-40 170.6 170 57.1
PSO832G3354 Papaver somniferum HOM05D005768 ORTHO05D007100 2.7e-40 170.6 163 58.3
Sc09g0009490 Simmondsia chinensis HOM05D005768 ORTHO05D007100 2.7e-40 170.6 211 51.2
Lsat_1_v5_gn_3_56860 Lactuca sativa HOM05D005768 ORTHO05D007100 3.5e-40 170.2 169 58.0
Sp1g18590 Schrenkiella parvula HOM05D005768 ORTHO05D007100 2.3e-39 167.5 170 57.1
Nn6g34840 Nelumbo nucifera HOM05D005768 ORTHO05D007100 3.0e-39 167.2 172 56.4
TPR.G33208 Trifolium pratense HOM05D005768 ORTHO05D007100 3.0e-39 167.2 167 56.3
Psat0s1830g0280 Pisum sativum HOM05D005768 ORTHO05D007100 5.1e-39 166.4 168 56.5
CARHR021320 Cardamine hirsuta HOM05D005768 ORTHO05D007100 6.6e-39 166.0 170 55.3
PSO832G1534 Papaver somniferum HOM05D005768 ORTHO05D007100 6.6e-39 166.0 164 56.1
MELO3C003477.2 Cucumis melo HOM05D005768 ORTHO05D007100 1.1e-38 165.2 178 53.4
Aa31LG7G5050 Aethionema arabicum HOM05D005768 ORTHO05D007100 1.5e-38 164.9 157 59.2
Haze_01966 Corylus avellana HOM05D005768 ORTHO05D007100 1.5e-38 164.9 161 57.8
AL1G33910 Arabidopsis lyrata HOM05D005768 ORTHO05D007100 1.9e-38 164.5 170 55.9
Glyma.19G233100 Glycine max HOM05D005768 ORTHO05D007100 2.5e-38 164.1 155 58.7
Medtr7g112710 Medicago truncatula HOM05D005768 ORTHO05D007100 3.3e-38 163.7 164 56.7
PSO063G1479 Papaver somniferum HOM05D005768 ORTHO05D007100 3.3e-38 163.7 171 55.6
PSO063G2632 Papaver somniferum HOM05D005768 ORTHO05D007100 3.3e-38 163.7 171 55.6
PSO063G5891 Papaver somniferum HOM05D005768 ORTHO05D007100 3.3e-38 163.7 171 55.6
Ah.02g116310 Amaranthus hybridus HOM05D005768 ORTHO05D007100 5.6e-38 162.9 175 52.6
BcaB07g32084 Brassica carinata HOM05D005768 ORTHO05D007100 7.3e-38 162.5 165 58.2
Lj1g0020400 Lotus japonicus HOM05D005768 ORTHO05D007100 7.3e-38 162.5 171 55.0
QL12p040865 Quercus lobata HOM05D005768 ORTHO05D007100 7.3e-38 162.5 257 41.6
A07p15420 Brassica napus HOM05D005768 ORTHO05D007100 9.6e-38 162.2 157 59.2
Migut.A00171 Erythranthe guttata HOM05D005768 ORTHO05D007100 9.6e-38 162.2 155 59.4
Psat0s1830g0160 Pisum sativum HOM05D005768 ORTHO05D007100 9.6e-38 162.2 168 56.0
Aqoxy7G01356 Aquilegia oxysepala HOM05D005768 ORTHO05D007100 1.3e-37 161.8 178 53.4
BcaC06g34845 Brassica carinata HOM05D005768 ORTHO05D007100 2.1e-37 161.0 157 58.6
CsaV3_3G048420 Cucumis sativus L. HOM05D005768 ORTHO05D007100 2.1e-37 161.0 178 52.2
EL10Ac5g12654 Beta vulgaris HOM05D005768 ORTHO05D007100 2.8e-37 160.6 174 51.7
Thhalv10008823m.g Eutrema salsugineum HOM05D005768 ORTHO05D007100 6.2e-37 159.5 173 53.8
Lalb_Chr24g0397251 Lupinus albus HOM05D005768 ORTHO05D007100 6.2e-37 159.5 173 53.2
Sed0022019 Sechium edule HOM05D005768 ORTHO05D007100 8.1e-37 159.1 178 53.9
BcaB03g14295 Brassica carinata HOM05D005768 ORTHO05D007100 1.4e-36 158.3 182 52.2
SalBow6G5216 Salvia bowleyana HOM05D005768 ORTHO05D007100 1.4e-36 158.3 155 58.1
TPR.G29192 Trifolium pratense HOM05D005768 ORTHO05D007100 1.4e-36 158.3 171 53.2
Carub.0001s2036 Capsella rubella HOM05D005768 ORTHO05D007100 3.1e-36 157.1 165 55.2
Gohir.A07G022184 Gossypium hirsutum HOM05D005768 ORTHO05D007100 3.1e-36 157.1 144 61.8
Phvul.006G089400 Phaseolus vulgaris HOM05D005768 ORTHO05D007100 5.3e-36 156.4 160 54.4
ECA234G0765 Erigeron canadensis HOM05D000185 ORTHO05D000105 6.9e-36 156.0 170 54.1
SGA_v2.0_scaffold103G30048 Striga asiatica HOM05D005768 ORTHO05D007100 6.9e-36 156.0 171 55.0
Lalb_Chr08g0242881 Lupinus albus HOM05D005768 ORTHO05D007100 9.0e-36 155.6 164 53.0
Sed0000338 Sechium edule HOM05D005768 ORTHO05D007100 9.0e-36 155.6 166 54.2
SEGI_27706 Sequoiadendron giganteum HOM05D005768 ORTHO05D007100 1.2e-35 155.2 177 50.3
FAN15G1520 Fragaria x ananassa HOM05D005768 ORTHO05D007100 2.0e-35 154.5 134 62.7
AT1G76480 Arabidopsis thaliana HOM05D005768 ORTHO05D007100 5.8e-35 152.9 179 50.3
Nitab4.5_0002021g0070 Nicotiana tabacum HOM05D005768 ORTHO05D007100 5.8e-35 152.9 157 56.1
MSTRG.25924 Avicennia marina HOM05D005768 ORTHO05D007100 7.6e-35 152.5 144 60.4
AUR62017359 Chenopodium quinoa HOM05D005768 ORTHO05D007100 7.6e-35 152.5 179 49.7
AUR62010536 Chenopodium quinoa HOM05D005768 ORTHO05D007100 2.2e-34 151.0 155 54.2
arahy.Tifrunner.gnm1.ann1.FJ9VJT Arachis hypogaea HOM05D005768 ORTHO05D007100 3.8e-34 150.2 173 52.0
unitig_0.g2567 Utricularia gibba HOM05D005768 ORTHO05D007100 1.9e-33 147.9 136 61.0
Os03g0804100 Oryza sativa ssp. japonica HOM05D005768 ORTHO05D007100 2.1e-32 144.4 180 48.3
Os08g0374900 Oryza sativa ssp. japonica HOM05D005768 ORTHO05D007100 1.7e-31 141.4 158 51.9
Lj7A696G17 Lonicera japonica HOM05D005768 ORTHO05D007100 8.7e-31 139.0 180 51.1
PSO832G4156 Papaver somniferum HOM05D005768 ORTHO05D007100 5.6e-30 136.3 149 53.0
Oeu033885.1 Olea europaea HOM05D005768 ORTHO05D007100 2.1e-29 134.4 142 57.7
Zm00001eb061390 Zea mays HOM05D005768 ORTHO05D007100 6.2e-29 132.9 153 50.3
PSO063G4631 Papaver somniferum HOM05D005768 ORTHO05D007100 1.8e-28 131.3 121 61.2
AL2G36620 Arabidopsis lyrata HOM05D005768 ORTHO05D007100 2.4e-28 131.0 171 49.7
C07p22730 Brassica napus HOM05D005768 ORTHO05D007100 5.3e-28 129.8 131 57.3
BolC7t42805H Brassica oleracea HOM05D005768 ORTHO05D007100 1.5e-27 128.3 131 56.5
Hund19578 Selenicereus undatus HOM05D005768 ORTHO05D007100 7.6e-27 125.9 142 52.1
A06p16890 Brassica napus HOM05D005768 ORTHO05D007100 3.8e-26 123.6 133 56.4
Ca_05797_v3 Cicer arietinum L. HOM05D001134 ORTHO05D001035 3.0e-23 114.0 121 55.4
BraA06t24798Z Brassica rapa HOM05D005768 ORTHO05D007100 1.1e-22 112.1 170 47.1
ClCG02G014210 Citrullus lanatus HOM05D005768 ORTHO05D007100 7.4e-22 109.4 110 57.3
C05p19520 Brassica napus HOM05D005768 ORTHO05D007100 2.8e-21 107.5 162 45.7
BolC5t30654H Brassica oleracea HOM05D005768 ORTHO05D007100 2.8e-21 107.5 162 45.7
SalBow4G3076 Salvia bowleyana HOM05D005768 ORTHO05D007100 1.4e-20 105.1 155 43.9
ATR0693G003 Amborella trichopoda HOM05D005768 ORTHO05D007100 1.8e-20 104.8 153 44.4
HPP92_009604 Vanilla planifolia HOM05D005768 ORTHO05D007100 5.3e-20 103.2 114 50.9
MBI02_g46987_MAGBIO Magnolia biondii HOM05D005768 ORTHO05D007100 6.9e-20 102.8 98 61.2
Glyma.03G235400 Glycine max HOM05D005768 ORTHO05D007100 1.2e-19 102.1 133 46.6
FvH4_2g35150 Fragaria vesca HOM05D005768 ORTHO05D007100 1.5e-19 101.7 79 64.6
Thhalv10019630m.g Eutrema salsugineum HOM05D005768 ORTHO05D007100 3.4e-19 100.5 137 48.9
MBI02_g46884_MAGBIO Magnolia biondii HOM05D000614 ORTHO05D007100 7.6e-19 99.4 121 52.1
Sc09g0009510 Simmondsia chinensis HOM05D005768 ORTHO05D007100 2.7e-16 90.9 88 58.0
HanXRQChr14g0439211 Helianthus annuus HOM05D005768 ORTHO05D007100 1.0e-15 89.0 104 49.0
CDE02G0943 Ceratophyllum demersum HOM05D005768 ORTHO05D007100 1.1e-14 85.5 92 52.2
Mapoly0062s0068 Marchantia polymorpha HOM05D005768 ORTHO05D007100 1.5e-14 85.1 151 37.7
Pp3c24_1520 Physcomitrium patens HOM05D005768 ORTHO05D007100 8.2e-13 79.3 156 34.6
DCAR_003074 Daucus carota HOM05D001613 ORTHO05D001556 1.7e-10 71.6 97 45.4
Oeu002722.1 Olea europaea HOM05D005768 ORTHO05D007100 7.9e-08 62.8 44 70.5
Cre12.g547734 Chlamydomonas reinhardtii HOM05D005768 ORTHO05D007100 1.1e-06 58.9 112 42.0


User provided reference genes

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