Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro05254 Vaccinium macrocarpon HOM05D005694 ORTHO05D007402 2.2e-222 775.4 408 100.0
Rhsim10G0112600 Rhododendron simsii HOM05D005694 ORTHO05D007402 1.3e-150 537.0 441 66.4
CSS0006569 Camellia sinensis var. sinensis HOM05D005694 ORTHO05D007402 5.8e-143 511.5 431 64.7
Prupe.6G229100 Prunus persica HOM05D005694 ORTHO05D007402 5.6e-138 495.0 437 61.3
Actinidia12019 Actinidia chinensis HOM05D005694 ORTHO05D007402 2.4e-136 489.6 445 62.5
Sabra05G0051000 Salix brachista HOM05D005694 ORTHO05D007402 1.0e-134 484.2 395 66.3
Potri.005G060500 Populus trichocarpa HOM05D005694 ORTHO05D007402 4.9e-134 481.9 395 66.8
Duzib264G0643 Durio zibethinus HOM05D005694 ORTHO05D007402 1.4e-133 480.3 398 64.3
Haze_15351 Corylus avellana HOM05D005694 ORTHO05D007402 1.9e-133 479.9 445 61.3
Cfa004061 Carpinus fangiana HOM05D005694 ORTHO05D007402 9.3e-133 477.6 445 60.0
FvH4_1g16760 Fragaria vesca HOM05D005694 ORTHO05D007402 2.1e-132 476.5 433 60.0
Manes.12G108400 Manihot esculenta HOM05D005694 ORTHO05D007402 2.1e-132 476.5 435 61.4
FAN23G2399 Fragaria x ananassa HOM05D005694 ORTHO05D007402 6.0e-132 474.9 438 59.8
CiPaw.01G012900 Carya illinoinensis HOM05D005694 ORTHO05D007402 7.9e-132 474.6 438 62.3
Atru.chr3.251 Acer truncatum HOM05D005694 ORTHO05D007402 2.3e-131 473.0 403 64.8
Thecc.01G063300 Theobroma cacao HOM05D005694 ORTHO05D007402 2.3e-131 473.0 402 63.4
FAN19G0282 Fragaria x ananassa HOM05D005694 ORTHO05D007402 3.9e-131 472.2 433 60.7
QL06p040237 Quercus lobata HOM05D005694 ORTHO05D007402 6.7e-131 471.5 418 63.9
FAN26G1197 Fragaria x ananassa HOM05D005694 ORTHO05D007402 8.7e-131 471.1 432 60.6
Gorai.007G218000 Gossypium raimondii HOM05D005694 ORTHO05D007402 1.9e-130 469.9 406 62.6
Sed0004561 Sechium edule HOM05D005694 ORTHO05D007402 1.9e-130 469.9 447 58.6
RcHm_v2.0_Chr2g0106661 Rosa chinensis HOM05D005694 ORTHO05D007402 2.5e-130 469.5 431 59.2
Cpa.g.sc6.99 Carica papaya HOM05D005694 ORTHO05D007402 5.7e-130 468.4 439 59.7
Oeu037163.1 Olea europaea HOM05D005694 ORTHO05D007402 7.4e-130 468.0 394 63.5
Gohir.D11G203300 Gossypium hirsutum HOM05D005694 ORTHO05D007402 2.2e-129 466.5 404 62.6
Lj4g0009127 Lotus japonicus HOM05D005694 ORTHO05D007402 3.7e-129 465.7 388 63.1
MELO3C007585.2 Cucumis melo HOM05D005694 ORTHO05D007402 4.8e-129 465.3 451 56.5
MSTRG.2849 Avicennia marina HOM05D005694 ORTHO05D007402 6.3e-129 464.9 439 58.3
CsaV3_6G043550 Cucumis sativus L. HOM05D005694 ORTHO05D007402 1.8e-128 463.4 449 56.3
COL.COLO4_11482 Corchorus olitorius HOM05D005694 ORTHO05D007402 4.1e-128 462.2 450 57.1
Glyma.17G167200 Glycine max HOM05D005694 ORTHO05D007402 5.3e-128 461.8 403 60.5
Nitab4.5_0002657g0010 Nicotiana tabacum HOM05D005694 ORTHO05D007402 6.9e-128 461.5 439 58.1
EL10Ac6g15690 Beta vulgaris HOM05D005694 ORTHO05D007402 1.5e-127 460.3 445 58.7
Sopen03g008170 Solanum pennellii HOM05D005694 ORTHO05D007402 2.0e-127 459.9 417 58.3
arahy.Tifrunner.gnm1.ann1.ZT89Y7 Arachis hypogaea HOM05D005694 ORTHO05D007402 2.6e-127 459.5 398 60.8
Ciclev10025664m.g Citrus clementina HOM05D005694 ORTHO05D007402 5.9e-127 458.4 395 62.0
Solyc03g044190.3 Solanum lycopersicum HOM05D005694 ORTHO05D007402 1.7e-126 456.8 417 58.3
CANSAT25G2140 Cannabis sativa HOM05D005694 ORTHO05D007402 3.8e-126 455.7 441 58.0
BcaC05g29844 Brassica carinata HOM05D005694 ORTHO05D007402 8.5e-126 454.5 438 56.8
BolC5t34672H Brassica oleracea HOM05D005694 ORTHO05D007402 8.5e-126 454.5 438 56.8
CANSAT25G0291 Cannabis sativa HOM05D005694 ORTHO05D007402 1.4e-125 453.8 442 57.7
C05p60220 Brassica napus HOM05D005694 ORTHO05D007402 1.9e-125 453.4 445 55.5
ClCG01G017080 Citrullus lanatus HOM05D005694 ORTHO05D007402 1.9e-125 453.4 432 56.0
PGR004G1079 Punica granatum HOM05D005694 ORTHO05D007402 2.5e-125 453.0 436 56.2
arahy.Tifrunner.gnm1.ann1.MA1EVV Arachis hypogaea HOM05D005694 ORTHO05D007402 4.2e-125 452.2 443 56.4
Nitab4.5_0003962g0030 Nicotiana tabacum HOM05D005694 ORTHO05D007402 4.2e-125 452.2 437 57.9
Lalb_Chr16g0388811 Lupinus albus HOM05D005694 ORTHO05D007402 7.2e-125 451.4 401 59.9
AL8G44040 Arabidopsis lyrata HOM05D005694 ORTHO05D007402 2.1e-124 449.9 395 61.0
Thhalv10004317m.g Eutrema salsugineum HOM05D005694 ORTHO05D007402 2.7e-124 449.5 435 55.4
BraA05t22832Z Brassica rapa HOM05D005694 ORTHO05D007402 3.6e-124 449.1 434 56.7
Dinv26866 Davidia involucrata HOM05D005694 ORTHO05D007402 3.6e-124 449.1 357 66.9
HanXRQChr12g0377261 Helianthus annuus HOM05D005694 ORTHO05D007402 4.6e-124 448.7 388 61.3
BcaB06g28844 Brassica carinata HOM05D005694 ORTHO05D007402 1.4e-123 447.2 426 56.6
A05p41050 Brassica napus HOM05D005694 ORTHO05D007402 1.8e-123 446.8 396 59.6
MD02G1178800 Malus domestica HOM05D005694 ORTHO05D007402 1.8e-123 446.8 386 62.7
Nn1g04704 Nelumbo nucifera HOM05D005694 ORTHO05D007402 1.8e-123 446.8 413 58.4
Hund16366 Selenicereus undatus HOM05D005694 ORTHO05D007402 3.0e-123 446.0 399 61.4
Medtr4g094962 Medicago truncatula HOM05D005694 ORTHO05D007402 3.9e-123 445.7 415 59.0
AUR62003938 Chenopodium quinoa HOM05D005694 ORTHO05D007402 8.8e-123 444.5 400 59.8
PGSC0003DMG400014873 Solanum tuberosum HOM05D005694 ORTHO05D007402 1.1e-122 444.1 397 58.7
SGA_v2.0_scaffold143G35788 Striga asiatica HOM05D005694 ORTHO05D007402 1.5e-122 443.7 394 60.2
AUR62038254 Chenopodium quinoa HOM05D005694 ORTHO05D007402 2.0e-122 443.4 399 59.4
Ca_22124_v3 Cicer arietinum L. HOM05D005694 ORTHO05D007402 2.0e-122 443.4 403 58.8
Migut.H00394 Erythranthe guttata HOM05D005694 ORTHO05D007402 2.0e-122 443.4 407 59.0
TPR.G23863 Trifolium pratense HOM05D005694 ORTHO05D007402 3.3e-122 442.6 419 58.2
Duzib147G1433 Durio zibethinus HOM05D005694 ORTHO05D007402 4.3e-122 442.2 402 59.0
Lsat_1_v5_gn_3_88661 Lactuca sativa HOM05D005694 ORTHO05D007402 9.7e-122 441.0 397 59.2
TAR625G0317 Trochodendron aralioides HOM05D005694 ORTHO05D007402 9.7e-122 441.0 407 59.2
CARHR280330 Cardamine hirsuta HOM05D005694 ORTHO05D007402 2.2e-121 439.9 416 58.2
Peaxi162Scf00365g00618 Petunia axillaris HOM05D005694 ORTHO05D007402 2.2e-121 439.9 397 58.7
Sp2g29370 Schrenkiella parvula HOM05D005694 ORTHO05D007402 2.8e-121 439.5 394 59.4
Aqoxy6G02871 Aquilegia oxysepala HOM05D005694 ORTHO05D007402 4.8e-121 438.7 444 55.6
Carub.0008s2721 Capsella rubella HOM05D005694 ORTHO05D007402 4.8e-121 438.7 396 59.6
THA.LOC104819246 Tarenaya hassleriana HOM05D005694 ORTHO05D007402 6.3e-121 438.3 397 60.5
VMungo0251G0564 Vigna mungo HOM05D005694 ORTHO05D007402 6.3e-121 438.3 424 56.1
AT5G67290 Arabidopsis thaliana HOM05D005694 ORTHO05D007402 6.9e-120 434.9 438 55.9
ECA246G1807 Erigeron canadensis HOM05D005694 ORTHO05D007402 9.1e-120 434.5 382 59.4
Aa31LG1G15820 Aethionema arabicum HOM05D005694 ORTHO05D007402 1.2e-119 434.1 400 58.5
Gohir.A11G220300 Gossypium hirsutum HOM05D005694 ORTHO05D007402 1.5e-119 433.7 408 60.3
Psat4g084360 Pisum sativum HOM05D005694 ORTHO05D007402 1.5e-119 433.7 412 56.8
Lj4g0018653 Lotus japonicus HOM05D005694 ORTHO05D007402 2.0e-119 433.3 389 62.2
DCAR_025759 Daucus carota HOM05D005694 ORTHO05D007402 2.6e-119 433.0 371 63.6
TAR625G0863 Trochodendron aralioides HOM05D005694 ORTHO05D007402 1.3e-118 430.6 414 57.7
Sc16g0005230 Simmondsia chinensis HOM05D005694 ORTHO05D007402 1.6e-116 423.7 417 55.2
Phvul.003G240300 Phaseolus vulgaris HOM05D005694 ORTHO05D007402 2.7e-116 422.9 422 55.0
TAR381G0027 Trochodendron aralioides HOM05D005694 ORTHO05D007402 3.6e-116 422.5 444 54.5
TAR381G0285 Trochodendron aralioides HOM05D005694 ORTHO05D007402 3.6e-116 422.5 444 54.5
Glyma.05G097800 Glycine max HOM05D005694 ORTHO05D007402 1.4e-115 420.6 424 55.7
PSO541G0377 Papaver somniferum HOM05D005694 ORTHO05D007402 1.8e-115 420.2 392 58.7
Eucgr.I00761 Eucalyptus grandis HOM05D005694 ORTHO05D007402 1.4e-112 410.6 402 57.0
Eucgr.I00787 Eucalyptus grandis HOM05D005694 ORTHO05D007402 1.8e-112 410.2 402 56.7
unitig_46.g18707 Utricularia gibba HOM05D005694 ORTHO05D007402 3.8e-110 402.5 394 54.6
PSO675G2151 Papaver somniferum HOM05D005694 ORTHO05D007402 1.9e-109 400.2 417 55.6
Cc11_g04760 Coffea canephora HOM05D005694 ORTHO05D007402 3.6e-108 396.0 403 55.6
ATR1098G030 Amborella trichopoda HOM05D005694 ORTHO05D007402 2.8e-105 386.3 388 54.9
Sc16g0005220 Simmondsia chinensis HOM05D005694 ORTHO05D007402 6.3e-105 385.2 417 51.8
Dinv30033 Davidia involucrata HOM05D005694 ORTHO05D007402 2.0e-103 380.2 436 53.4
HPP92_017733 Vanilla planifolia HOM05D005694 ORTHO05D007402 1.0e-102 377.9 387 54.5
Os07g0155100 Oryza sativa ssp. japonica HOM05D005694 ORTHO05D007402 2.0e-98 363.6 402 49.8
CDE06G0326 Ceratophyllum demersum HOM05D005694 ORTHO05D007402 7.5e-98 361.7 387 52.7
Zm00001eb300250 Zea mays HOM05D005694 ORTHO05D007402 9.7e-98 361.3 401 50.6
AagrBONN_evm.TU.Sc2ySwM_117.3787 Anthoceros agrestis HOM05D005694 ORTHO05D007402 2.0e-95 353.6 415 47.0
SEGI_26559 Sequoiadendron giganteum HOM05D005694 ORTHO05D007402 6.5e-94 348.6 399 49.6
HanXRQChr02g0044351 Helianthus annuus HOM05D005694 ORTHO05D007402 4.7e-92 342.4 386 50.5
Pp3c14_12180 Physcomitrium patens HOM05D005694 ORTHO05D007402 2.0e-90 337.0 410 47.6
Mapoly0178s0017 Marchantia polymorpha HOM05D005694 ORTHO05D007402 2.2e-89 333.6 403 46.4
ECA238G4251 Erigeron canadensis HOM05D005694 ORTHO05D007402 1.2e-87 327.8 394 50.0
SMO351G0208 Selaginella moellendorffii HOM05D005694 ORTHO05D007402 7.2e-85 318.5 396 45.2
SMO367G0384 Selaginella moellendorffii HOM05D005694 ORTHO05D007402 1.0e-83 314.7 404 44.3
HPP92_017700 Vanilla planifolia HOM05D005694 ORTHO05D007402 7.8e-79 298.5 338 51.5
Aa31LG1G15830 Aethionema arabicum HOM05D005694 ORTHO05D007402 1.3e-78 297.7 247 60.7
Lj7C77T1 Lonicera japonica HOM05D005694 ORTHO05D007402 7.3e-77 292.0 292 58.9
FAN28G1711 Fragaria x ananassa HOM05D005694 ORTHO05D007402 9.2e-72 275.0 201 67.7
FAN28G1889 Fragaria x ananassa HOM05D005694 ORTHO05D007402 9.2e-72 275.0 201 67.7
SEGI_01647 Sequoiadendron giganteum HOM05D005694 ORTHO05D007402 3.5e-71 273.1 400 42.2
CAN.G572.58 Capsicum annuum HOM05D005694 ORTHO05D007402 9.8e-66 255.0 291 51.2
Mapoly0178s0018 Marchantia polymorpha HOM05D005694 ORTHO05D007402 4.3e-61 239.6 342 43.0
Actinidia36463 Actinidia chinensis HOM05D005694 ORTHO05D007402 1.3e-57 228.0 192 62.5
Cre16.g671450 Chlamydomonas reinhardtii HOM05D005694 ORTHO05D007402 8.3e-57 225.3 419 35.1
Lj7A77T5 Lonicera japonica HOM05D005694 ORTHO05D007402 2.7e-47 193.7 119 79.8
MCO03G407 Micromonas commoda HOM05D005694 ORTHO05D007402 7.8e-47 192.2 401 35.2
MCO09G374 Micromonas commoda HOM05D005694 ORTHO05D007402 1.7e-41 174.5 429 32.6
Aa31LG1G15840 Aethionema arabicum HOM05D005694 ORTHO05D007402 1.2e-39 168.3 143 60.8
Medtr8g072720 Medicago truncatula HOM05D005694 ORTHO05D007402 1.1e-32 145.2 82 84.1
Aa31LG1G18440 Aethionema arabicum HOM05D005694 ORTHO05D007402 5.4e-32 142.9 176 49.4
Cfa023451 Carpinus fangiana HOM05D000115 ORTHO05D005317 9.3e-24 115.5 418 28.9
PRCOL_00002834 Prasinoderma coloniale HOM05D005694 ORTHO05D007402 3.3e-21 107.1 369 27.1
Aa31sc2295G20 Aethionema arabicum HOM05D005694 ORTHO05D007402 2.1e-15 87.8 114 46.5
BcaNung00805 Brassica carinata HOM05D005694 ORTHO05D007402 1.2e-10 72.0 69 52.2
Aa31LG1G18450 Aethionema arabicum HOM05D005694 ORTHO05D007402 1.5e-10 71.6 73 52.1
Aa31sc2295G10 Aethionema arabicum HOM05D005694 ORTHO05D007402 1.5e-10 71.6 73 52.1


User provided reference genes

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