Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro05206 Vaccinium macrocarpon HOM05D007351 ORTHO05D009386 1.7e-102 375.9 182 100.0
vmacro05202 Vaccinium macrocarpon HOM05D007351 ORTHO05D009386 9.3e-24 114.4 169 44.4
Cc11_g01660 Coffea canephora HOM05D007351 ORTHO05D009386 3.3e-21 105.9 165 40.0
QL12p031742 Quercus lobata HOM05D007351 ORTHO05D009386 3.3e-21 105.9 173 39.3
Migut.A00300 Erythranthe guttata HOM05D007351 ORTHO05D009386 4.3e-21 105.5 165 40.6
MSTRG.11754 Avicennia marina HOM05D007351 ORTHO05D009386 5.6e-21 105.1 165 38.8
Actinidia15698 Actinidia chinensis HOM05D007351 ORTHO05D009386 9.6e-21 104.4 164 40.2
Hma1.2p1_0000F.1_g000940 Hydrangea macrophylla HOM05D007351 ORTHO05D009386 9.6e-21 104.4 165 40.0
Lsat_1_v5_gn_6_21681 Lactuca sativa HOM05D007351 ORTHO05D009386 9.6e-21 104.4 165 40.0
Aqoxy7G02003 Aquilegia oxysepala HOM05D007351 ORTHO05D009386 1.6e-20 103.6 165 39.4
Lj8A616G46 Lonicera japonica HOM05D007351 ORTHO05D009386 1.6e-20 103.6 165 40.0
Nitab4.5_0000508g0220 Nicotiana tabacum HOM05D007351 ORTHO05D009386 1.6e-20 103.6 165 38.8
arahy.Tifrunner.gnm1.ann1.8MNE4Q Arachis hypogaea HOM05D007351 ORTHO05D009386 2.8e-20 102.8 165 42.4
SGA_v2.0_scaffold448G51771 Striga asiatica HOM05D007351 ORTHO05D009386 2.8e-20 102.8 165 41.2
PGSC0003DMG400007382 Solanum tuberosum HOM05D007351 ORTHO05D009386 3.6e-20 102.4 165 40.0
DCAR_003046 Daucus carota HOM05D007351 ORTHO05D009386 4.8e-20 102.1 165 40.0
Nn2g11909 Nelumbo nucifera HOM05D007351 ORTHO05D009386 4.8e-20 102.1 165 38.2
Prupe.1G471900 Prunus persica HOM05D007351 ORTHO05D009386 4.8e-20 102.1 165 38.2
Aa31sc586G10 Aethionema arabicum HOM05D007351 ORTHO05D009386 6.2e-20 101.7 165 38.8
CSS0046405 Camellia sinensis var. sinensis HOM05D007351 ORTHO05D009386 6.2e-20 101.7 165 40.0
MD08G1141900 Malus domestica HOM05D007351 ORTHO05D009386 8.1e-20 101.3 165 38.2
Manes.16G118400 Manihot esculenta HOM05D007351 ORTHO05D009386 1.1e-19 100.9 165 38.8
Atru.chr7.2359 Acer truncatum HOM05D007351 ORTHO05D009386 1.8e-19 100.1 165 38.8
COL.COLO4_24001 Corchorus olitorius HOM05D007351 ORTHO05D009386 1.8e-19 100.1 165 38.8
Duzib150G1343 Durio zibethinus HOM05D007351 ORTHO05D009386 1.8e-19 100.1 165 38.8
Eucgr.C01805 Eucalyptus grandis HOM05D007351 ORTHO05D009386 1.8e-19 100.1 165 38.2
PSO017G1621 Papaver somniferum HOM05D007351 ORTHO05D009386 1.8e-19 100.1 165 38.2
PSO170G0157 Papaver somniferum HOM05D007351 ORTHO05D009386 1.8e-19 100.1 165 38.2
Solyc08g067430.4 Solanum lycopersicum HOM05D007351 ORTHO05D009386 3.1e-19 99.4 165 38.8
arahy.Tifrunner.gnm1.ann1.C4YKET Arachis hypogaea HOM05D007351 ORTHO05D009386 4.0e-19 99.0 165 37.6
Cpa.g.sc91.32 Carica papaya HOM05D007351 ORTHO05D009386 4.0e-19 99.0 165 40.0
FvH4_2g29770 Fragaria vesca HOM05D007351 ORTHO05D009386 4.0e-19 99.0 165 38.2
FAN24G0983 Fragaria x ananassa HOM05D007351 ORTHO05D009386 4.0e-19 99.0 165 38.2
FAN27G2935 Fragaria x ananassa HOM05D007351 ORTHO05D009386 4.0e-19 99.0 165 38.2
Rhsim07G0150700 Rhododendron simsii HOM05D007351 ORTHO05D009386 4.0e-19 99.0 165 43.0
AT2G25605 Arabidopsis thaliana HOM05D007351 ORTHO05D009386 5.3e-19 98.6 165 38.2
CARHR115710 Cardamine hirsuta HOM05D007351 ORTHO05D009386 5.3e-19 98.6 165 38.2
RcHm_v2.0_Chr6g0298791 Rosa chinensis HOM05D007351 ORTHO05D009386 5.3e-19 98.6 165 37.6
TAR625G1337 Trochodendron aralioides HOM05D007351 ORTHO05D009386 5.3e-19 98.6 165 37.6
CiPaw.08G014100 Carya illinoinensis HOM05D007351 ORTHO05D009386 6.9e-19 98.2 165 37.6
Thecc.09G147600 Theobroma cacao HOM05D007351 ORTHO05D009386 6.9e-19 98.2 165 38.2
BcaC02g08337 Brassica carinata HOM05D007351 ORTHO05D009386 9.0e-19 97.8 165 37.6
A04p19820 Brassica napus HOM05D007351 ORTHO05D009386 9.0e-19 97.8 165 37.6
C04p55560 Brassica napus HOM05D007351 ORTHO05D009386 9.0e-19 97.8 165 37.6
BolC4t27080H Brassica oleracea HOM05D007351 ORTHO05D009386 9.0e-19 97.8 165 37.6
BraA04t17570Z Brassica rapa HOM05D007351 ORTHO05D009386 9.0e-19 97.8 165 37.6
Psat5g027160 Pisum sativum HOM05D007351 ORTHO05D009386 9.0e-19 97.8 164 37.2
PGR031G1798 Punica granatum HOM05D007351 ORTHO05D009386 9.0e-19 97.8 163 37.4
Peaxi162Scf00251g01128 Petunia axillaris HOM05D007351 ORTHO05D009386 1.2e-18 97.4 165 38.2
FAN15G3188 Fragaria x ananassa HOM05D007351 ORTHO05D009386 1.5e-18 97.1 165 38.2
Potri.006G249000 Populus trichocarpa HOM05D007351 ORTHO05D009386 1.5e-18 97.1 165 37.6
Sabra06G0194800 Salix brachista HOM05D007351 ORTHO05D009386 1.5e-18 97.1 165 37.6
ECA233G0102 Erigeron canadensis HOM05D007351 ORTHO05D009386 2.0e-18 96.7 165 38.2
Glyma.06G071600 Glycine max HOM05D007351 ORTHO05D009386 2.0e-18 96.7 168 38.7
Carub.0004s0533 Capsella rubella HOM05D007351 ORTHO05D009386 2.6e-18 96.3 165 37.6
Ca_15711_v3 Cicer arietinum L. HOM05D007351 ORTHO05D009386 2.6e-18 96.3 164 36.6
Gohir.D08G102800 Gossypium hirsutum HOM05D007351 ORTHO05D009386 2.6e-18 96.3 166 36.7
GSVIVG01035772001 Vitis vinifera HOM05D007351 ORTHO05D009386 2.6e-18 96.3 165 41.2
HanXRQChr13g0402411 Helianthus annuus HOM05D007351 ORTHO05D009386 3.4e-18 95.9 165 38.2
Lj1g0014043 Lotus japonicus HOM05D007351 ORTHO05D009386 3.4e-18 95.9 164 36.6
Medtr3g107860 Medicago truncatula HOM05D007351 ORTHO05D009386 3.4e-18 95.9 164 36.0
THA.LOC104804500 Tarenaya hassleriana HOM05D007351 ORTHO05D009386 3.4e-18 95.9 165 37.6
Thhalv10000330m.g Eutrema salsugineum HOM05D007351 ORTHO05D009386 4.5e-18 95.5 165 36.4
Gorai.004G110800 Gossypium raimondii HOM05D007351 ORTHO05D009386 4.5e-18 95.5 165 36.4
BcaB06g28079 Brassica carinata HOM05D007351 ORTHO05D009386 5.8e-18 95.1 165 36.4
MBI04_g00950_MAGBIO Magnolia biondii HOM05D007351 ORTHO05D009386 7.6e-18 94.7 165 36.4
CANSAT54G2502 Cannabis sativa HOM05D007351 ORTHO05D009386 1.3e-17 94.0 166 40.4
TWI34G1290 Tripterygium wilfordii HOM05D007351 ORTHO05D009386 1.3e-17 94.0 169 37.3
Ciclev10009550m.g Citrus clementina HOM05D007351 ORTHO05D009386 1.7e-17 93.6 169 38.5
Os05g0574700 Oryza sativa ssp. japonica HOM05D007351 ORTHO05D009386 2.2e-17 93.2 165 35.8
AL4G17070 Arabidopsis lyrata HOM05D007351 ORTHO05D009386 2.9e-17 92.8 165 36.4
CANSAT11G2455 Cannabis sativa HOM05D007351 ORTHO05D009386 2.9e-17 92.8 165 40.0
Gohir.A08G090000 Gossypium hirsutum HOM05D007351 ORTHO05D009386 3.8e-17 92.4 165 35.8
Zm00001eb344390 Zea mays HOM05D007351 ORTHO05D009386 4.9e-17 92.0 166 35.5
TPR.G27335 Trifolium pratense HOM05D007351 ORTHO05D009386 6.4e-17 91.7 164 35.4
Nitab4.5_0002339g0070 Nicotiana tabacum HOM05D007351 ORTHO05D009386 8.4e-17 91.3 168 36.3
CDE06G1133 Ceratophyllum demersum HOM05D007351 ORTHO05D009386 1.4e-16 90.5 165 36.4
EL10Ac2g02569 Beta vulgaris HOM05D007351 ORTHO05D009386 1.9e-16 90.1 165 35.2
Glyma.04G069700 Glycine max HOM05D007351 ORTHO05D009386 2.4e-16 89.7 168 36.9
Phvul.009G096100 Phaseolus vulgaris HOM05D007351 ORTHO05D009386 2.4e-16 89.7 168 36.9
AUR62032351 Chenopodium quinoa HOM05D007351 ORTHO05D009386 9.3e-16 87.8 165 40.6
Lalb_Chr23g0268831 Lupinus albus HOM05D007351 ORTHO05D009386 1.2e-15 87.4 168 36.3
Hund03010 Selenicereus undatus HOM05D007351 ORTHO05D009386 1.2e-15 87.4 165 35.8
Sc06g0000580 Simmondsia chinensis HOM05D007351 ORTHO05D009386 1.2e-15 87.4 165 34.5
AUR62041846 Chenopodium quinoa HOM05D007351 ORTHO05D009386 1.6e-15 87.0 165 40.0
unitig_32.g11667 Utricularia gibba HOM05D007351 ORTHO05D009386 3.5e-15 85.9 165 35.8
Sopen08g021360 Solanum pennellii HOM05D007351 ORTHO05D009386 1.0e-14 84.3 165 35.8
Oeu045191.1 Olea europaea HOM05D007351 ORTHO05D009386 3.0e-14 82.8 45 86.7
MELO3C003678.2 Cucumis melo HOM05D007351 ORTHO05D009386 2.5e-13 79.7 164 31.1
Sed0005695 Sechium edule HOM05D007351 ORTHO05D009386 5.6e-13 78.6 164 31.1
VMungo1309G2796 Vigna mungo HOM05D007351 ORTHO05D009386 9.6e-13 77.8 161 34.8
ATR0680G179 Amborella trichopoda HOM05D007351 ORTHO05D009386 1.4e-11 73.9 165 32.1
SEGI_27006 Sequoiadendron giganteum HOM05D007351 ORTHO05D009386 1.5e-10 70.5 167 29.9
Sp4g05090 Schrenkiella parvula HOM05D007351 ORTHO05D009386 1.3e-09 67.4 149 30.9
CsaV3_3G046600 Cucumis sativus L. HOM05D007351 ORTHO05D009386 2.2e-09 66.6 153 29.4
SMO269G0024 Selaginella moellendorffii HOM05D007351 ORTHO05D009386 2.4e-08 63.2 166 28.9
AagrBONN_evm.TU.Sc2ySwM_228.1243 Anthoceros agrestis HOM05D007351 ORTHO05D009386 1.6e-07 60.5 164 29.3


User provided reference genes

Program Settings