Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro05170 Vaccinium macrocarpon HOM05D004340 ORTHO05D006363 2.3e-44 181.8 90 100.0
QL03p068099 Quercus lobata HOM05D004340 ORTHO05D006363 3.2e-33 144.8 82 84.1
GSVIVG01019948001 Vitis vinifera HOM05D004340 ORTHO05D006363 3.2e-33 144.8 82 86.6
vmacro11375 Vaccinium macrocarpon HOM05D004340 ORTHO05D006363 4.1e-33 144.4 86 86.0
CSS0018825 Camellia sinensis var. sinensis HOM05D004340 ORTHO05D006363 5.4e-33 144.1 82 85.4
Rhsim10G0119600 Rhododendron simsii HOM05D004340 ORTHO05D006363 5.4e-33 144.1 84 86.9
Cfa008953 Carpinus fangiana HOM05D004340 ORTHO05D006363 1.2e-32 142.9 82 84.1
CiPaw.05G131900 Carya illinoinensis HOM05D004340 ORTHO05D006363 1.2e-32 142.9 82 84.1
PSO063G1986 Papaver somniferum HOM05D004340 ORTHO05D006363 2.1e-32 142.1 82 82.9
PSO832G0091 Papaver somniferum HOM05D004340 ORTHO05D006363 2.1e-32 142.1 82 82.9
vmacro05308 Vaccinium macrocarpon HOM05D004340 ORTHO05D006363 6.0e-32 140.6 83 86.7
Haze_11982 Corylus avellana HOM05D004340 ORTHO05D006363 1.3e-31 139.4 82 82.9
Eucgr.I00217 Eucalyptus grandis HOM05D004340 ORTHO05D006363 8.6e-31 136.7 82 80.5
CANSAT64G1884 Cannabis sativa HOM05D004340 ORTHO05D006363 1.1e-30 136.3 82 82.9
Aqoxy3G03456 Aquilegia oxysepala HOM05D004340 ORTHO05D006363 1.5e-30 136.0 82 81.7
Dinv16674 Davidia involucrata HOM05D004340 ORTHO05D006363 3.3e-30 134.8 82 81.7
AUR62005824 Chenopodium quinoa HOM05D004340 ORTHO05D006363 5.6e-30 134.0 87 77.0
Nn4g23232 Nelumbo nucifera HOM05D004340 ORTHO05D006363 7.3e-30 133.7 82 78.0
EL10Ac6g13244 Beta vulgaris HOM05D004340 ORTHO05D006363 1.6e-29 132.5 87 74.7
Oeu005760.1 Olea europaea HOM05D004340 ORTHO05D006363 1.6e-29 132.5 83 79.5
CAN.G1335.16 Capsicum annuum HOM05D004340 ORTHO05D006363 2.8e-29 131.7 82 79.3
Duzib251G0421 Durio zibethinus HOM05D004340 ORTHO05D006363 2.8e-29 131.7 82 79.3
Peaxi162Scf00222g00716 Petunia axillaris HOM05D004340 ORTHO05D006363 3.6e-29 131.3 82 79.3
Prupe.1G035400 Prunus persica HOM05D004340 ORTHO05D006363 4.7e-29 131.0 82 79.3
Gohir.A13G077700 Gossypium hirsutum HOM05D004340 ORTHO05D006363 6.2e-29 130.6 82 78.0
Gohir.D13G076900 Gossypium hirsutum HOM05D004340 ORTHO05D006363 6.2e-29 130.6 82 78.0
Gorai.013G087900 Gossypium raimondii HOM05D004340 ORTHO05D006363 6.2e-29 130.6 82 78.0
Nitab4.5_0004300g0030 Nicotiana tabacum HOM05D004340 ORTHO05D006363 6.2e-29 130.6 82 78.0
Hund25218 Selenicereus undatus HOM05D004340 ORTHO05D006363 6.2e-29 130.6 87 74.7
AUR62032818 Chenopodium quinoa HOM05D004340 ORTHO05D006363 8.1e-29 130.2 82 78.0
MBI05_g36413_MAGBIO Magnolia biondii HOM05D004340 ORTHO05D006363 8.1e-29 130.2 82 79.3
Sopen05g003610 Solanum pennellii HOM05D004340 ORTHO05D006363 8.1e-29 130.2 82 78.0
PGSC0003DMG400018437 Solanum tuberosum HOM05D004340 ORTHO05D006363 8.1e-29 130.2 82 78.0
FvH4_5g29350 Fragaria vesca HOM05D004340 ORTHO05D006363 1.1e-28 129.8 82 78.0
FAN04G3196 Fragaria x ananassa HOM05D004340 ORTHO05D006363 1.1e-28 129.8 82 78.0
FAN13G0065 Fragaria x ananassa HOM05D004340 ORTHO05D006363 1.1e-28 129.8 82 78.0
RcHm_v2.0_Chr4g0439421 Rosa chinensis HOM05D004340 ORTHO05D006363 1.1e-28 129.8 82 78.0
TAR629G2604 Trochodendron aralioides HOM05D004340 ORTHO05D006363 1.1e-28 129.8 82 80.5
FAN18G2257 Fragaria x ananassa HOM05D004340 ORTHO05D006363 1.4e-28 129.4 82 76.8
Sc11g0002100 Simmondsia chinensis HOM05D004340 ORTHO05D006363 1.4e-28 129.4 87 73.6
Aqoxy3G02559 Aquilegia oxysepala HOM05D004340 ORTHO05D006363 1.8e-28 129.0 82 76.8
SalBow2G1648 Salvia bowleyana HOM05D004340 ORTHO05D006363 2.3e-28 128.6 82 78.0
Thecc.02G342300 Theobroma cacao HOM05D004340 ORTHO05D006363 2.3e-28 128.6 82 79.3
Eucgr.L00670 Eucalyptus grandis HOM05D004340 ORTHO05D006363 3.1e-28 128.3 83 75.9
Atru.chr10.1247 Acer truncatum HOM05D004340 ORTHO05D006363 4.0e-28 127.9 82 76.8
Ca_18821_v3 Cicer arietinum L. HOM05D004340 ORTHO05D006363 4.0e-28 127.9 82 75.6
Ca_29729_v3 Cicer arietinum L. HOM05D004340 ORTHO05D006363 4.0e-28 127.9 82 75.6
MD16G1069200 Malus domestica HOM05D004340 ORTHO05D006363 4.0e-28 127.9 82 76.8
Atru.chr11.1746 Acer truncatum HOM05D004340 ORTHO05D006363 5.2e-28 127.5 82 76.8
Solyc05g007750.4 Solanum lycopersicum HOM05D004340 ORTHO05D006363 8.9e-28 126.7 82 78.0
Cc11_g12720 Coffea canephora HOM05D004340 ORTHO05D006363 1.5e-27 125.9 82 78.0
Nitab4.5_0000040g0090 Nicotiana tabacum HOM05D004340 ORTHO05D006363 1.5e-27 125.9 82 75.6
PGR102G3073 Punica granatum HOM05D004340 ORTHO05D006363 1.5e-27 125.9 82 78.0
Glyma.11G220500 Glycine max HOM05D004340 ORTHO05D006363 2.0e-27 125.6 82 74.4
Glyma.18G036900 Glycine max HOM05D004340 ORTHO05D006363 2.0e-27 125.6 82 74.4
Ah.03g134830 Amaranthus hybridus HOM05D004340 ORTHO05D006363 3.4e-27 124.8 87 71.3
Migut.L01267 Erythranthe guttata HOM05D004340 ORTHO05D006363 4.4e-27 124.4 82 78.0
DCAR_027428 Daucus carota HOM05D004340 ORTHO05D006363 5.8e-27 124.0 82 74.4
Glyma.10G070000 Glycine max HOM05D004340 ORTHO05D006363 5.8e-27 124.0 82 73.2
Lalb_Chr05g0220271 Lupinus albus HOM05D004340 ORTHO05D006363 5.8e-27 124.0 82 73.2
Lj1g0001827 Lotus japonicus HOM05D004340 ORTHO05D006363 7.5e-27 123.6 82 73.2
Medtr4g082265 Medicago truncatula HOM05D004340 ORTHO05D006363 7.5e-27 123.6 82 74.4
Phvul.001G233800 Phaseolus vulgaris HOM05D004340 ORTHO05D006363 7.5e-27 123.6 82 73.2
THA.LOC104801804 Tarenaya hassleriana HOM05D004340 ORTHO05D006363 7.5e-27 123.6 82 70.7
VMungo1383G3199 Vigna mungo HOM05D004340 ORTHO05D006363 7.5e-27 123.6 82 73.2
arahy.Tifrunner.gnm1.ann1.AR8P07 Arachis hypogaea HOM05D004340 ORTHO05D006363 9.9e-27 123.2 82 73.2
arahy.Tifrunner.gnm1.ann1.MXBT1J Arachis hypogaea HOM05D004340 ORTHO05D006363 9.9e-27 123.2 82 73.2
Medtr4g082150 Medicago truncatula HOM05D004340 ORTHO05D006363 1.3e-26 122.9 82 73.2
Medtr7g021880 Medicago truncatula HOM05D004340 ORTHO05D006363 1.3e-26 122.9 82 73.2
Psat7g160080 Pisum sativum HOM05D004340 ORTHO05D006363 1.3e-26 122.9 82 74.4
TPR.G34046 Trifolium pratense HOM05D004340 ORTHO05D006363 2.2e-26 122.1 82 73.2
ECA233G3760 Erigeron canadensis HOM05D004340 ORTHO05D006363 2.9e-26 121.7 82 76.8
Lj3A1035G45 Lonicera japonica HOM05D004340 ORTHO05D006363 2.9e-26 121.7 82 75.6
Lj4g0013877 Lotus japonicus HOM05D004340 ORTHO05D006363 3.7e-26 121.3 82 73.2
SGA_v2.0_scaffold172G38951 Striga asiatica HOM05D004340 ORTHO05D006363 3.7e-26 121.3 82 76.8
COL.COLO4_27998 Corchorus olitorius HOM05D004340 ORTHO05D006363 4.9e-26 120.9 82 73.2
Nn1g04520 Nelumbo nucifera HOM05D004340 ORTHO05D006363 4.9e-26 120.9 71 80.3
Lsat_1_v5_gn_8_50141 Lactuca sativa HOM05D004340 ORTHO05D006363 1.1e-25 119.8 82 76.8
Potri.008G089600 Populus trichocarpa HOM05D004340 ORTHO05D006363 1.4e-25 119.4 80 71.2
Sabra08G0067000 Salix brachista HOM05D004340 ORTHO05D006363 1.4e-25 119.4 82 69.5
TPR.G5981 Trifolium pratense HOM05D004340 ORTHO05D006363 1.9e-25 119.0 82 70.7
MSTRG.717 Avicennia marina HOM05D004340 ORTHO05D006363 4.1e-25 117.9 82 75.6
HanXRQChr12g0362121 Helianthus annuus HOM05D004340 ORTHO05D006363 4.1e-25 117.9 82 74.4
Ciclev10030675m.g Citrus clementina HOM05D004340 ORTHO05D006363 7.1e-25 117.1 82 72.0
Cpa.g.sc1.50 Carica papaya HOM05D004340 ORTHO05D006363 1.6e-24 115.9 82 72.0
Os04g0484800 Oryza sativa ssp. japonica HOM05D004340 ORTHO05D006363 2.1e-24 115.5 82 69.5
Zm00001eb227040 Zea mays HOM05D004340 ORTHO05D006363 6.0e-24 114.0 82 70.7
BraA02t04684Z Brassica rapa HOM05D004340 ORTHO05D006363 1.0e-23 113.2 82 67.1
BraA04t16952Z Brassica rapa HOM05D004340 ORTHO05D006363 1.0e-23 113.2 82 67.1
Thhalv10027638m.g Eutrema salsugineum HOM05D004340 ORTHO05D006363 1.0e-23 113.2 82 68.3
AT2G04660 Arabidopsis thaliana HOM05D004340 ORTHO05D006363 1.3e-23 112.8 82 67.1
AL3G42300 Arabidopsis lyrata HOM05D004340 ORTHO05D006363 1.7e-23 112.5 82 67.1
Manes.01G034000 Manihot esculenta HOM05D004340 ORTHO05D006363 2.3e-23 112.1 82 72.0
TWI79G0307 Tripterygium wilfordii HOM05D004340 ORTHO05D006363 3.9e-23 111.3 82 67.1
BcaC03g13079 Brassica carinata HOM05D004340 ORTHO05D006363 6.6e-23 110.5 82 64.6
BolC2t06011H Brassica oleracea HOM05D004340 ORTHO05D006363 6.6e-23 110.5 82 64.6
Aa31LG10G13720 Aethionema arabicum HOM05D004340 ORTHO05D006363 8.6e-23 110.2 82 64.6
CARHR261990 Cardamine hirsuta HOM05D004340 ORTHO05D006363 1.5e-22 109.4 82 65.9
Carub.0003s2628 Capsella rubella HOM05D004340 ORTHO05D006363 3.3e-22 108.2 82 64.6
Sp7g01960 Schrenkiella parvula HOM05D004340 ORTHO05D006363 3.3e-22 108.2 82 64.6
ATR0564G449 Amborella trichopoda HOM05D004340 ORTHO05D006363 4.3e-22 107.8 82 70.7
BcaB05g21922 Brassica carinata HOM05D004340 ORTHO05D006363 9.5e-22 106.7 82 67.1
C04p46590 Brassica napus HOM05D004340 ORTHO05D006363 1.6e-21 105.9 82 64.6
BolC4t26245H Brassica oleracea HOM05D004340 ORTHO05D006363 1.6e-21 105.9 82 65.9
CsaV3_5G025240 Cucumis sativus L. HOM05D004340 ORTHO05D006363 2.1e-21 105.5 82 67.1
MELO3C002960.2 Cucumis melo HOM05D004340 ORTHO05D006363 6.2e-21 104.0 82 67.1
HPP92_022007 Vanilla planifolia HOM05D004340 ORTHO05D006363 8.1e-21 103.6 81 67.9
A04p12890 Brassica napus HOM05D004340 ORTHO05D006363 1.8e-20 102.4 82 62.2
Sed0000698 Sechium edule HOM05D004340 ORTHO05D006363 6.8e-20 100.5 82 65.9
SEGI_17726 Sequoiadendron giganteum HOM05D004340 ORTHO05D006363 3.2e-17 91.7 85 58.8
HPP92_021921 Vanilla planifolia HOM05D004340 ORTHO05D006363 9.2e-17 90.1 76 63.2
ClCG09G021920 Citrullus lanatus HOM05D004340 ORTHO05D006363 4.6e-16 87.8 77 63.6
BcaB06g27417 Brassica carinata HOM05D004340 ORTHO05D006363 3.0e-15 85.1 82 56.1
Pp3c11_22070 Physcomitrium patens HOM05D004340 ORTHO05D006363 1.2e-11 73.2 82 50.0
SMO361G0530 Selaginella moellendorffii HOM05D004340 ORTHO05D006363 2.9e-10 68.6 86 45.3
AagrBONN_evm.TU.Sc2ySwM_344.3807 Anthoceros agrestis HOM05D004340 ORTHO05D006363 4.9e-10 67.8 82 47.6
SHI21660 Sapria himalayana HOM05D004340 ORTHO05D006363 8.4e-10 67.0 77 51.9
Mapoly0122s0055 Marchantia polymorpha HOM05D004340 ORTHO05D006363 7.1e-09 63.9 82 42.7
Eucgr.L00684 Eucalyptus grandis HOM05D004340 ORTHO05D006363 9.3e-09 63.5 41 73.2
CBR_g543 Chara braunii HOM05D004340 ORTHO05D006363 1.2e-08 63.2 97 39.2


User provided reference genes

Program Settings