Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro05161 Vaccinium macrocarpon HOM05D005419 ORTHO05D007365 5.2e-159 564.3 281 100.0
GSVIVG01035939001 Vitis vinifera HOM05D005419 ORTHO05D007365 8.4e-141 503.8 272 89.0
Dinv15871 Davidia involucrata HOM05D005419 ORTHO05D007365 1.4e-140 503.1 272 88.2
Hma1.2p1_0974F.1_g243070 Hydrangea macrophylla HOM05D005419 ORTHO05D007365 1.4e-140 503.1 272 88.2
CSS0019044 Camellia sinensis var. sinensis HOM05D005419 ORTHO05D007365 1.2e-139 500.0 272 89.0
Actinidia14096 Actinidia chinensis HOM05D005419 ORTHO05D007365 4.6e-139 498.0 261 90.8
Duzib150G0083 Durio zibethinus HOM05D005419 ORTHO05D007365 2.3e-138 495.7 272 87.9
QL02p020871 Quercus lobata HOM05D005419 ORTHO05D007365 3.0e-138 495.4 272 88.2
Phvul.001G049700 Phaseolus vulgaris HOM05D005419 ORTHO05D007365 5.1e-138 494.6 272 87.1
VMungo0647G0032 Vigna mungo HOM05D005419 ORTHO05D007365 8.7e-138 493.8 272 86.8
Cfa013117 Carpinus fangiana HOM05D005419 ORTHO05D007365 2.5e-137 492.3 272 86.8
CiPaw.07G226000 Carya illinoinensis HOM05D005419 ORTHO05D007365 3.3e-137 491.9 272 86.4
Cc08_g00340 Coffea canephora HOM05D005419 ORTHO05D007365 4.3e-137 491.5 271 87.5
Gorai.010G116600 Gossypium raimondii HOM05D005419 ORTHO05D007365 4.3e-137 491.5 271 87.1
Gohir.D05G058700 Gossypium hirsutum HOM05D005419 ORTHO05D007365 7.3e-137 490.7 272 86.4
Gorai.009G059800 Gossypium raimondii HOM05D005419 ORTHO05D007365 7.3e-137 490.7 272 86.4
PGR119G2552 Punica granatum HOM05D005419 ORTHO05D007365 7.3e-137 490.7 272 86.4
CsaV3_2G032220 Cucumis sativus L. HOM05D005419 ORTHO05D007365 9.6e-137 490.3 273 86.1
Gohir.A06G099500 Gossypium hirsutum HOM05D005419 ORTHO05D007365 9.6e-137 490.3 271 86.7
SalBow4G1212 Salvia bowleyana HOM05D005419 ORTHO05D007365 9.6e-137 490.3 272 86.8
Ciclev10009082m.g Citrus clementina HOM05D005419 ORTHO05D007365 1.6e-136 489.6 273 86.1
EL10Ac2g04167 Beta vulgaris HOM05D005419 ORTHO05D007365 2.1e-136 489.2 271 86.3
Glyma.14G113800 Glycine max HOM05D005419 ORTHO05D007365 2.1e-136 489.2 272 86.0
Atru.chr7.2482 Acer truncatum HOM05D005419 ORTHO05D007365 2.8e-136 488.8 273 85.0
AUR62012434 Chenopodium quinoa HOM05D005419 ORTHO05D007365 4.8e-136 488.0 272 86.4
Gohir.D06G101700 Gossypium hirsutum HOM05D005419 ORTHO05D007365 6.2e-136 487.6 271 86.3
Manes.16G125000 Manihot esculenta HOM05D005419 ORTHO05D007365 6.2e-136 487.6 272 86.0
Prupe.1G484800 Prunus persica HOM05D005419 ORTHO05D007365 1.4e-135 486.5 273 86.1
TAR383G1021 Trochodendron aralioides HOM05D005419 ORTHO05D007365 1.4e-135 486.5 271 85.6
Peaxi162Scf00935g00015 Petunia axillaris HOM05D005419 ORTHO05D007365 1.8e-135 486.1 272 85.7
Thecc.09G020800 Theobroma cacao HOM05D005419 ORTHO05D007365 3.1e-135 485.3 274 85.8
MELO3C011274.2 Cucumis melo HOM05D005419 ORTHO05D007365 4.0e-135 485.0 273 85.7
Nitab4.5_0014723g0010 Nicotiana tabacum HOM05D005419 ORTHO05D007365 4.0e-135 485.0 272 85.7
AUR62031558 Chenopodium quinoa HOM05D005419 ORTHO05D007365 9.0e-135 483.8 271 86.3
RcHm_v2.0_Chr6g0297381 Rosa chinensis HOM05D005419 ORTHO05D007365 1.2e-134 483.4 272 84.9
Sed0010362 Sechium edule HOM05D005419 ORTHO05D007365 1.2e-134 483.4 272 84.6
unitig_32.g10881 Utricularia gibba HOM05D005419 ORTHO05D007365 1.2e-134 483.4 274 84.3
Eucgr.K02838 Eucalyptus grandis HOM05D005419 ORTHO05D007365 2.0e-134 482.6 272 84.6
MD15G1129200 Malus domestica HOM05D005419 ORTHO05D007365 2.0e-134 482.6 272 85.3
MSTRG.26021 Avicennia marina HOM05D005419 ORTHO05D007365 2.6e-134 482.3 271 86.3
FvH4_2g28610 Fragaria vesca HOM05D005419 ORTHO05D007365 3.4e-134 481.9 272 85.7
FAN24G2053 Fragaria x ananassa HOM05D005419 ORTHO05D007365 3.4e-134 481.9 272 85.7
TWI34G1484 Tripterygium wilfordii HOM05D005419 ORTHO05D007365 5.8e-134 481.1 272 84.6
CANSAT25G3306 Cannabis sativa HOM05D005419 ORTHO05D007365 9.9e-134 480.3 273 85.3
FAN15G2739 Fragaria x ananassa HOM05D005419 ORTHO05D007365 9.9e-134 480.3 273 84.6
DCAR_003104 Daucus carota HOM05D005419 ORTHO05D007365 1.3e-133 479.9 272 84.2
Lj5g0012746 Lotus japonicus HOM05D005419 ORTHO05D007365 1.3e-133 479.9 272 83.8
Potri.018G023700 Populus trichocarpa HOM05D005419 ORTHO05D007365 1.3e-133 479.9 272 85.3
Aqoxy7G03594 Aquilegia oxysepala HOM05D005419 ORTHO05D007365 2.2e-133 479.2 271 84.1
Lj8A726G39 Lonicera japonica HOM05D005419 ORTHO05D007365 2.2e-133 479.2 271 86.0
FAN20G2331 Fragaria x ananassa HOM05D005419 ORTHO05D007365 2.9e-133 478.8 272 84.9
Nn2g12192 Nelumbo nucifera HOM05D005419 ORTHO05D007365 2.9e-133 478.8 273 83.9
Psat6g028000 Pisum sativum HOM05D005419 ORTHO05D007365 2.9e-133 478.8 272 83.8
Sabra18G0026400 Salix brachista HOM05D005419 ORTHO05D007365 3.8e-133 478.4 272 85.3
Medtr1g012830 Medicago truncatula HOM05D005419 ORTHO05D007365 4.9e-133 478.0 272 83.5
Sopen08g010000 Solanum pennellii HOM05D005419 ORTHO05D007365 4.9e-133 478.0 272 84.9
arahy.Tifrunner.gnm1.ann1.2DG9CD Arachis hypogaea HOM05D005419 ORTHO05D007365 1.1e-132 476.9 268 85.4
arahy.Tifrunner.gnm1.ann1.X3TF0E Arachis hypogaea HOM05D005419 ORTHO05D007365 1.1e-132 476.9 268 85.4
ATR0767G069 Amborella trichopoda HOM05D005419 ORTHO05D007365 1.4e-132 476.5 275 84.4
ECA248G3461 Erigeron canadensis HOM05D005419 ORTHO05D007365 1.9e-132 476.1 272 83.5
Migut.A00016 Erythranthe guttata HOM05D005419 ORTHO05D007365 1.9e-132 476.1 272 84.9
Sc09g0010330 Simmondsia chinensis HOM05D005419 ORTHO05D007365 1.9e-132 476.1 271 84.9
Solyc08g029110.3 Solanum lycopersicum HOM05D005419 ORTHO05D007365 2.4e-132 475.7 271 84.9
Ca_13036_v3 Cicer arietinum L. HOM05D005419 ORTHO05D007365 5.4e-132 474.6 272 81.6
Haze_21481 Corylus avellana HOM05D005419 ORTHO05D007365 5.4e-132 474.6 303 77.2
MD08G1152600 Malus domestica HOM05D005419 ORTHO05D007365 5.4e-132 474.6 272 84.6
Lalb_Chr23g0268401 Lupinus albus HOM05D005419 ORTHO05D007365 1.6e-131 473.0 272 83.8
HanXRQChr13g0387991 Helianthus annuus HOM05D005419 ORTHO05D007365 2.7e-131 472.2 272 83.1
Potri.006G258200 Populus trichocarpa HOM05D005419 ORTHO05D007365 4.6e-131 471.5 272 84.9
TPR.G14021 Trifolium pratense HOM05D005419 ORTHO05D007365 4.6e-131 471.5 272 82.4
Rhsim12G0212900 Rhododendron simsii HOM05D005419 ORTHO05D007365 7.9e-131 470.7 272 87.1
Cpa.g.sc187.13 Carica papaya HOM05D005419 ORTHO05D007365 5.1e-130 468.0 272 83.8
THA.LOC104805589 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 5.1e-130 468.0 271 83.0
HPP92_000481 Vanilla planifolia HOM05D005419 ORTHO05D007365 8.7e-130 467.2 273 81.0
ClCG08G013470 Citrullus lanatus HOM05D005419 ORTHO05D007365 1.9e-129 466.1 311 75.6
Nitab4.5_0007718g0040 Nicotiana tabacum HOM05D005419 ORTHO05D007365 1.9e-129 466.1 272 83.1
Carub.0004s0490 Capsella rubella HOM05D005419 ORTHO05D007365 4.3e-129 464.9 271 80.8
SGA_v2.0_scaffold20G09092 Striga asiatica HOM05D005419 ORTHO05D007365 4.3e-129 464.9 272 83.5
BcaB06g28051 Brassica carinata HOM05D005419 ORTHO05D007365 1.3e-128 463.4 271 80.4
FAN27G2423 Fragaria x ananassa HOM05D005419 ORTHO05D007365 1.6e-128 463.0 272 83.5
Sp4g04430 Schrenkiella parvula HOM05D005419 ORTHO05D007365 1.6e-128 463.0 271 80.4
AL4G16610 Arabidopsis lyrata HOM05D005419 ORTHO05D007365 8.1e-128 460.7 271 80.1
THA.LOC104815027 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 8.1e-128 460.7 268 84.0
Thhalv10000272m.g Eutrema salsugineum HOM05D005419 ORTHO05D007365 1.1e-127 460.3 271 79.7
PSO210G4598 Papaver somniferum HOM05D005419 ORTHO05D007365 1.1e-127 460.3 272 81.6
A04p19650 Brassica napus HOM05D005419 ORTHO05D007365 4.0e-127 458.4 271 79.3
BraA04t17556Z Brassica rapa HOM05D005419 ORTHO05D007365 4.0e-127 458.4 271 79.3
Aa31sc229G10 Aethionema arabicum HOM05D005419 ORTHO05D007365 6.9e-127 457.6 271 79.3
Zm00001eb362830 Zea mays HOM05D005419 ORTHO05D007365 6.9e-127 457.6 270 81.5
Lsat_1_v5_gn_5_157921 Lactuca sativa HOM05D005419 ORTHO05D007365 9.0e-127 457.2 268 82.8
Os08g0299000 Oryza sativa ssp. japonica HOM05D005419 ORTHO05D007365 9.0e-127 457.2 273 79.5
AT2G25280 Arabidopsis thaliana HOM05D005419 ORTHO05D007365 1.2e-126 456.8 271 79.3
MBI15_g25765_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D007365 1.2e-126 456.8 273 79.9
C04p55260 Brassica napus HOM05D005419 ORTHO05D007365 1.5e-126 456.4 271 79.0
BolC4t27063H Brassica oleracea HOM05D005419 ORTHO05D007365 1.5e-126 456.4 271 79.0
BcaC02g08359 Brassica carinata HOM05D005419 ORTHO05D007365 2.0e-126 456.1 271 79.0
BcaB08g35172 Brassica carinata HOM05D005419 ORTHO05D007365 9.9e-126 453.8 271 78.6
A09p55730 Brassica napus HOM05D005419 ORTHO05D007365 9.9e-126 453.8 271 77.9
BraA09t40974Z Brassica rapa HOM05D005419 ORTHO05D007365 9.9e-126 453.8 271 77.9
C08p38730 Brassica napus HOM05D005419 ORTHO05D007365 1.7e-125 453.0 269 78.4
BolC8t51443H Brassica oleracea HOM05D005419 ORTHO05D007365 1.7e-125 453.0 269 78.4
CDE03G0272 Ceratophyllum demersum HOM05D005419 ORTHO05D007365 1.7e-125 453.0 266 81.2
BcaC07g40875 Brassica carinata HOM05D005419 ORTHO05D007365 4.9e-125 451.4 268 78.4
CANSAT54G2335 Cannabis sativa HOM05D005419 ORTHO05D007365 1.4e-124 449.9 271 79.3
Hund04483 Selenicereus undatus HOM05D005419 ORTHO05D007365 3.5e-123 445.3 313 69.3
Duzib168G1909 Durio zibethinus HOM05D005419 ORTHO05D007365 6.0e-123 444.5 272 80.9
Sed0006243 Sechium edule HOM05D005419 ORTHO05D007365 1.6e-120 436.4 272 75.4
COL.COLO4_18897 Corchorus olitorius HOM05D005419 ORTHO05D007365 6.2e-120 434.5 237 86.5
Dinv18189 Davidia involucrata HOM05D005419 ORTHO05D007365 7.6e-118 427.6 272 78.7
CARHR116260 Cardamine hirsuta HOM05D005419 ORTHO05D007365 1.7e-117 426.4 273 75.1
MBI15_g36826_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D007365 3.2e-116 422.2 275 75.3
SEGI_34683 Sequoiadendron giganteum HOM05D005419 ORTHO05D007365 9.3e-116 420.6 273 72.5
Mapoly0065s0048 Marchantia polymorpha HOM05D005419 ORTHO05D007365 4.8e-112 408.3 272 71.3
SMO358G0334 Selaginella moellendorffii HOM05D005419 ORTHO05D007365 6.3e-112 407.9 273 71.1
Pp3c2_14390 Physcomitrium patens HOM05D005419 ORTHO05D007365 1.8e-111 406.4 270 71.1
Pp3c14_17280 Physcomitrium patens HOM05D005419 ORTHO05D007365 1.1e-108 397.1 269 69.5
Rhsim07G0160700 Rhododendron simsii HOM05D005419 ORTHO05D007365 8.7e-106 387.5 310 68.1
SEGI_02513 Sequoiadendron giganteum HOM05D005419 ORTHO05D007365 2.5e-105 386.0 223 82.1
CBR_g59364 Chara braunii HOM05D005419 ORTHO05D007365 3.7e-96 355.5 267 62.5
Oeu012280.1 Olea europaea HOM05D005419 ORTHO05D007365 7.4e-89 331.3 189 83.1
CAN.G75.9 Capsicum annuum HOM05D005419 ORTHO05D007365 7.0e-87 324.7 184 84.8
THA.LOC104815144 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 7.7e-86 321.2 183 85.2
Sabra06G0201900 Salix brachista HOM05D005419 ORTHO05D007365 4.5e-78 295.4 171 82.5
PRCOL_00000176 Prasinoderma coloniale HOM05D005419 ORTHO05D007365 7.7e-78 294.7 285 54.4
MCO07G667 Micromonas commoda HOM05D005419 ORTHO05D007365 4.7e-75 285.4 276 54.3
Cre02.g096200 Chlamydomonas reinhardtii HOM05D005419 ORTHO05D007365 6.1e-75 285.0 269 51.7
AagrBONN_evm.TU.Sc2ySwM_368.1912 Anthoceros agrestis HOM05D005419 ORTHO05D007365 2.8e-72 276.2 175 76.0
Haze_26290 Corylus avellana HOM05D005419 ORTHO05D007365 5.7e-65 251.9 276 45.3
FAN09G2129 Fragaria x ananassa HOM05D005419 ORTHO05D019206 1.7e-53 213.8 222 53.6
FAN28G2535 Fragaria x ananassa HOM05D005419 ORTHO05D019206 7.3e-52 208.4 222 52.7
Lalb_Chr11g0063641 Lupinus albus HOM05D005419 ORTHO05D007365 1.2e-51 207.6 155 69.7
Cfa026845 Carpinus fangiana HOM05D005419 ORTHO05D007365 6.2e-51 205.3 292 44.5
FAN01G2683 Fragaria x ananassa HOM05D005419 ORTHO05D019206 7.3e-44 181.8 99 85.9
FAN02G2313 Fragaria x ananassa HOM05D005419 ORTHO05D019206 1.2e-43 181.0 100 84.0
FAN21G3387 Fragaria x ananassa HOM05D005419 ORTHO05D019206 2.6e-41 173.3 95 85.3
Oeu012278.1 Olea europaea HOM05D005419 ORTHO05D007365 3.0e-37 159.8 88 85.2
Os05g0310750 Oryza sativa ssp. japonica HOM05D005419 ORTHO05D019206 1.1e-28 131.3 76 82.9
FAN05G2233 Fragaria x ananassa HOM05D004769 ORTHO05D005605 4.9e-24 115.9 164 42.7
FAN16G2296 Fragaria x ananassa HOM05D005419 ORTHO05D019206 1.6e-22 110.9 95 62.1
MBI12_g19406_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D242193 1.7e-08 64.3 51 60.8
Prupe.1G567700 Prunus persica HOM05D005419 ORTHO05D019206 2.4e-07 60.5 40 77.5


User provided reference genes

Program Settings