Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro05152 Vaccinium macrocarpon HOM05D004106 ORTHO05D004381 1.2e-109 399.8 203 100.0
Dinv08178 Davidia involucrata HOM05D004106 ORTHO05D004381 4.0e-60 235.3 201 65.7
Rhsim07G0165600 Rhododendron simsii HOM05D004106 ORTHO05D004381 5.2e-60 235.0 317 48.6
Dinv08223 Davidia involucrata HOM05D004106 ORTHO05D004381 5.8e-59 231.5 201 65.2
TAR626G0743 Trochodendron aralioides HOM05D004106 ORTHO05D004381 1.6e-56 223.4 201 63.2
Actinidia14131 Actinidia chinensis HOM05D004106 ORTHO05D004381 6.0e-56 221.5 201 64.7
Oeu006863.1 Olea europaea HOM05D004106 ORTHO05D004381 2.3e-55 219.5 201 62.2
CSS0032495 Camellia sinensis var. sinensis HOM05D004106 ORTHO05D004381 6.6e-55 218.0 177 68.9
TAR383G0918 Trochodendron aralioides HOM05D004106 ORTHO05D004381 1.5e-54 216.9 201 61.7
Oeu048547.1 Olea europaea HOM05D004106 ORTHO05D004381 9.6e-54 214.2 204 60.8
arahy.Tifrunner.gnm1.ann1.J1V5JT Arachis hypogaea HOM05D004106 ORTHO05D004381 4.8e-53 211.8 178 66.9
arahy.Tifrunner.gnm1.ann1.U84FQB Arachis hypogaea HOM05D004106 ORTHO05D004381 4.8e-53 211.8 178 66.9
Hund25620 Selenicereus undatus HOM05D004106 ORTHO05D004381 8.1e-53 211.1 194 61.3
Prupe.1G394300 Prunus persica HOM05D004106 ORTHO05D004381 9.0e-52 207.6 184 63.0
Atru.chr7.22 Acer truncatum HOM05D004106 ORTHO05D004381 2.0e-51 206.5 176 65.9
EL10Ac2g02497 Beta vulgaris HOM05D004106 ORTHO05D004381 2.0e-51 206.5 201 60.7
Potri.018G105600 Populus trichocarpa HOM05D004106 ORTHO05D004381 2.0e-51 206.5 205 58.5
QL02p093501 Quercus lobata HOM05D004106 ORTHO05D004381 2.0e-51 206.5 175 66.3
CANSAT11G1220 Cannabis sativa HOM05D004106 ORTHO05D004381 2.6e-51 206.1 171 66.1
TWI63G0696 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 3.4e-51 205.7 201 58.7
MBI14_g09102_MAGBIO Magnolia biondii HOM05D004106 ORTHO05D004381 5.8e-51 204.9 216 57.4
MSTRG.1632 Avicennia marina HOM05D004106 ORTHO05D004381 7.6e-51 204.5 193 59.1
FAN15G2986 Fragaria x ananassa HOM05D004106 ORTHO05D004381 9.9e-51 204.1 187 63.6
FvH4_2g41160 Fragaria vesca HOM05D004106 ORTHO05D004381 1.3e-50 203.8 187 63.6
Lalb_Chr07g0179881 Lupinus albus HOM05D004106 ORTHO05D004381 1.3e-50 203.8 172 65.7
Ciclev10009489m.g Citrus clementina HOM05D004106 ORTHO05D004381 1.7e-50 203.4 176 65.3
Hund02987 Selenicereus undatus HOM05D004106 ORTHO05D004381 1.7e-50 203.4 194 61.3
FAN27G3303 Fragaria x ananassa HOM05D004106 ORTHO05D004381 2.9e-50 202.6 187 63.1
ATR0580G427 Amborella trichopoda HOM05D004106 ORTHO05D004381 3.8e-50 202.2 186 61.8
ClCG06G012460 Citrullus lanatus HOM05D004106 ORTHO05D004381 3.8e-50 202.2 179 62.6
Cpa.g.sc46.167 Carica papaya HOM05D004106 ORTHO05D004381 4.9e-50 201.8 204 59.3
RcHm_v2.0_Chr6g0299371 Rosa chinensis HOM05D004106 ORTHO05D004381 4.9e-50 201.8 188 62.8
unitig_749.g13818 Utricularia gibba HOM05D004106 ORTHO05D004381 1.1e-49 200.7 179 62.0
PSO339G2511 Papaver somniferum HOM05D004106 ORTHO05D004381 1.4e-49 200.3 201 58.7
Solyc12g009980.2 Solanum lycopersicum HOM05D004106 ORTHO05D004381 1.4e-49 200.3 198 58.6
GSVIVG01023623001 Vitis vinifera HOM05D004106 ORTHO05D004381 1.4e-49 200.3 202 57.9
Glyma.06G225800 Glycine max HOM05D004106 ORTHO05D004381 1.9e-49 199.9 177 62.7
Prupe.7G264300 Prunus persica HOM05D004106 ORTHO05D004381 1.9e-49 199.9 171 64.3
TWI34G1622 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 1.9e-49 199.9 201 58.7
Phvul.005G005700 Phaseolus vulgaris HOM05D004106 ORTHO05D004381 2.4e-49 199.5 177 62.7
Gohir.A05G053000 Gossypium hirsutum HOM05D004106 ORTHO05D004381 3.2e-49 199.1 175 62.9
Gohir.A07G027300 Gossypium hirsutum HOM05D004106 ORTHO05D004381 3.2e-49 199.1 175 63.4
Gohir.D05G054601 Gossypium hirsutum HOM05D004106 ORTHO05D004381 3.2e-49 199.1 175 62.9
Gorai.001G032700 Gossypium raimondii HOM05D004106 ORTHO05D004381 3.2e-49 199.1 175 63.4
Gorai.009G056300 Gossypium raimondii HOM05D004106 ORTHO05D004381 3.2e-49 199.1 175 62.9
MD08G1056000 Malus domestica HOM05D004106 ORTHO05D004381 3.2e-49 199.1 185 62.2
Cc06_g14830 Coffea canephora HOM05D004106 ORTHO05D004381 4.2e-49 198.7 199 57.8
Manes.14G144700 Manihot esculenta HOM05D004106 ORTHO05D004381 4.2e-49 198.7 205 57.6
CAN.G551.46 Capsicum annuum HOM05D004106 ORTHO05D004381 5.4e-49 198.4 175 62.9
Duzib150G0841 Durio zibethinus HOM05D004106 ORTHO05D004381 5.4e-49 198.4 175 63.4
Glyma.12G156200 Glycine max HOM05D004106 ORTHO05D004381 5.4e-49 198.4 177 62.1
Ca_21133_v3 Cicer arietinum L. HOM05D004106 ORTHO05D004381 7.1e-49 198.0 176 64.2
VMungo1080G0447 Vigna mungo HOM05D004106 ORTHO05D004381 7.1e-49 198.0 202 57.4
Sopen12g004850 Solanum pennellii HOM05D004106 ORTHO05D004381 1.2e-48 197.2 175 62.9
PGSC0003DMG400007906 Solanum tuberosum HOM05D004106 ORTHO05D004381 1.2e-48 197.2 175 62.9
HanXRQChr03g0065371 Helianthus annuus HOM05D004106 ORTHO05D004381 1.6e-48 196.8 201 58.2
PSO384G4038 Papaver somniferum HOM05D004106 ORTHO05D004381 1.6e-48 196.8 201 58.2
Lj4g0010746 Lotus japonicus HOM05D004106 ORTHO05D004381 2.1e-48 196.4 201 60.2
Peaxi162Scf00062g00225 Petunia axillaris HOM05D004106 ORTHO05D004381 2.1e-48 196.4 175 64.6
Nitab4.5_0002011g0110 Nicotiana tabacum HOM05D004106 ORTHO05D004381 2.7e-48 196.1 199 59.3
MBI15_g18237_MAGBIO Magnolia biondii HOM05D004106 ORTHO05D004381 3.5e-48 195.7 190 58.9
SGA_v2.0_scaffold4G02174 Striga asiatica HOM05D004106 ORTHO05D004381 3.5e-48 195.7 208 57.2
HPP92_004701 Vanilla planifolia HOM05D004106 ORTHO05D004381 3.5e-48 195.7 178 61.2
CiPaw.15G167000 Carya illinoinensis HOM05D004106 ORTHO05D004381 4.6e-48 195.3 176 63.6
Lalb_Chr13g0300831 Lupinus albus HOM05D004106 ORTHO05D004381 4.6e-48 195.3 205 58.5
Manes.03G008200 Manihot esculenta HOM05D004106 ORTHO05D004381 4.6e-48 195.3 201 57.7
Solyc08g006780.3 Solanum lycopersicum HOM05D004106 ORTHO05D004381 4.6e-48 195.3 199 58.8
Medtr0380s0040 Medicago truncatula HOM05D004106 ORTHO05D004381 6.0e-48 194.9 177 62.1
Peaxi162Scf00045g02039 Petunia axillaris HOM05D004106 ORTHO05D004381 6.0e-48 194.9 189 59.3
Sed0000106 Sechium edule HOM05D004106 ORTHO05D004381 6.0e-48 194.9 180 61.7
CsaV3_1G029020 Cucumis sativus L. HOM05D004106 ORTHO05D004381 1.3e-47 193.7 179 61.5
Sopen08g002730 Solanum pennellii HOM05D004106 ORTHO05D004381 1.3e-47 193.7 183 59.6
Migut.E01458 Erythranthe guttata HOM05D004106 ORTHO05D004381 1.7e-47 193.4 203 56.2
THA.LOC104803919 Tarenaya hassleriana HOM05D004106 ORTHO05D004381 2.3e-47 193.0 180 61.7
vmacro06074 Vaccinium macrocarpon HOM05D004106 ORTHO05D004381 2.3e-47 193.0 177 61.0
Duzib168G0532 Durio zibethinus HOM05D004106 ORTHO05D004381 5.1e-47 191.8 175 62.3
HanXRQChr09g0244601 Helianthus annuus HOM05D004106 ORTHO05D004381 5.1e-47 191.8 176 61.9
Nitab4.5_0003563g0010 Nicotiana tabacum HOM05D004106 ORTHO05D004381 5.1e-47 191.8 198 58.1
Eucgr.C02498 Eucalyptus grandis HOM05D004106 ORTHO05D004381 8.7e-47 191.0 178 60.1
ECA240G3283 Erigeron canadensis HOM05D004106 ORTHO05D004381 1.5e-46 190.3 175 62.3
Lsat_1_v5_gn_7_50001 Lactuca sativa HOM05D004106 ORTHO05D004381 1.5e-46 190.3 175 60.6
PGSC0003DMG400026299 Solanum tuberosum HOM05D004106 ORTHO05D004381 1.9e-46 189.9 193 58.0
COL.COLO4_18821 Corchorus olitorius HOM05D004106 ORTHO05D004381 2.5e-46 189.5 175 60.6
Eucgr.C02535 Eucalyptus grandis HOM05D004106 ORTHO05D004381 2.5e-46 189.5 178 60.1
Sp4g02930 Schrenkiella parvula HOM05D004106 ORTHO05D004381 2.5e-46 189.5 177 61.0
Migut.K00317 Erythranthe guttata HOM05D004106 ORTHO05D004381 5.6e-46 188.3 201 54.7
Psat1g022480 Pisum sativum HOM05D004106 ORTHO05D004381 5.6e-46 188.3 178 59.6
THA.LOC104819993 Tarenaya hassleriana HOM05D004106 ORTHO05D004381 5.6e-46 188.3 177 61.0
Lj6g0027633 Lotus japonicus HOM05D004106 ORTHO05D004381 7.3e-46 188.0 209 53.6
AL4G14070 Arabidopsis lyrata HOM05D004106 ORTHO05D004381 9.6e-46 187.6 176 60.8
C08p39590 Brassica napus HOM05D004106 ORTHO05D004381 9.6e-46 187.6 184 59.2
BolC8t51532H Brassica oleracea HOM05D004106 ORTHO05D004381 9.6e-46 187.6 184 59.2
CARHR184720 Cardamine hirsuta HOM05D004106 ORTHO05D004381 9.6e-46 187.6 186 59.1
A08p19160 Brassica napus HOM05D004106 ORTHO05D004381 1.3e-45 187.2 184 58.7
A09p56640 Brassica napus HOM05D004106 ORTHO05D004381 1.3e-45 187.2 184 59.2
BraA09t41055Z Brassica rapa HOM05D004106 ORTHO05D004381 1.3e-45 187.2 184 59.2
CDE02G1701 Ceratophyllum demersum HOM05D004106 ORTHO05D004381 1.6e-45 186.8 201 56.2
CDE05G2988 Ceratophyllum demersum HOM05D004106 ORTHO05D004381 2.1e-45 186.4 177 61.0
Os02g0180200 Oryza sativa ssp. japonica HOM05D004106 ORTHO05D004381 2.1e-45 186.4 186 56.5
BraA08t33877Z Brassica rapa HOM05D004106 ORTHO05D004381 2.8e-45 186.0 184 58.2
Carub.0004s0318 Capsella rubella HOM05D004106 ORTHO05D004381 2.8e-45 186.0 177 60.5
CAN.G353.7 Capsicum annuum HOM05D004106 ORTHO05D004381 2.8e-45 186.0 173 61.3
BcaC07g40965 Brassica carinata HOM05D004106 ORTHO05D004381 3.6e-45 185.7 183 57.9
AT2G24020 Arabidopsis thaliana HOM05D004106 ORTHO05D004381 4.8e-45 185.3 176 60.2
Thhalv10026346m.g Eutrema salsugineum HOM05D004106 ORTHO05D004381 4.8e-45 185.3 177 58.8
SalBow1G1642 Salvia bowleyana HOM05D004106 ORTHO05D004381 6.2e-45 184.9 207 53.6
Actinidia23107 Actinidia chinensis HOM05D004106 ORTHO05D004381 8.1e-45 184.5 169 63.9
Sp7g28490 Schrenkiella parvula HOM05D004106 ORTHO05D004381 8.1e-45 184.5 176 59.1
Aa31LG2G19880 Aethionema arabicum HOM05D004106 ORTHO05D004381 1.4e-44 183.7 177 60.5
Thhalv10000343m.g Eutrema salsugineum HOM05D004106 ORTHO05D004381 2.4e-44 183.0 171 60.2
MD15G1041000 Malus domestica HOM05D004106 ORTHO05D004381 2.4e-44 183.0 185 57.8
Medtr4g130730 Medicago truncatula HOM05D004106 ORTHO05D004381 2.4e-44 183.0 172 61.6
Ah.10g025490 Amaranthus hybridus HOM05D004106 ORTHO05D004381 3.1e-44 182.6 214 55.6
TPR.G24849 Trifolium pratense HOM05D004106 ORTHO05D004381 6.9e-44 181.4 170 61.8
BcaB03g12652 Brassica carinata HOM05D004106 ORTHO05D004381 9.0e-44 181.0 180 57.8
AT4G30620 Arabidopsis thaliana HOM05D004106 ORTHO05D004381 1.2e-43 180.6 170 60.0
Psat4g009640 Pisum sativum HOM05D004106 ORTHO05D004381 1.2e-43 180.6 177 59.3
PGR102G1248 Punica granatum HOM05D004106 ORTHO05D004381 1.2e-43 180.6 175 57.7
AL7G21520 Arabidopsis lyrata HOM05D004106 ORTHO05D004381 2.0e-43 179.9 170 60.0
TWI32G0932 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 2.0e-43 179.9 179 60.9
Aqoxy7G02301 Aquilegia oxysepala HOM05D004106 ORTHO05D004381 4.5e-43 178.7 151 65.6
TPR.G3593 Trifolium pratense HOM05D004106 ORTHO05D004381 4.5e-43 178.7 182 57.1
Carub.0007s0995 Capsella rubella HOM05D004106 ORTHO05D004381 5.8e-43 178.3 170 59.4
Zm00001eb206700 Zea mays HOM05D004106 ORTHO05D004381 9.9e-43 177.6 176 56.8
Cfa013048 Carpinus fangiana HOM05D004106 ORTHO05D004381 1.3e-42 177.2 148 67.6
BolC3t21168H Brassica oleracea HOM05D004106 ORTHO05D004381 2.2e-42 176.4 186 56.5
Aqoxy7G02464 Aquilegia oxysepala HOM05D004106 ORTHO05D004381 8.4e-42 174.5 193 54.4
Haze_21409 Corylus avellana HOM05D004106 ORTHO05D004381 1.4e-41 173.7 161 63.4
C03p88620 Brassica napus HOM05D004106 ORTHO05D004381 1.6e-40 170.2 176 58.0
Lalb_Chr12g0198731 Lupinus albus HOM05D004106 ORTHO05D004381 7.9e-40 167.9 149 63.8
Sabra18G0090100 Salix brachista HOM05D004106 ORTHO05D004381 1.3e-39 167.2 205 50.2
AUR62024802 Chenopodium quinoa HOM05D004106 ORTHO05D004381 1.8e-39 166.8 151 62.3
AUR62032418 Chenopodium quinoa HOM05D004106 ORTHO05D004381 1.8e-39 166.8 151 62.3
Nn8g39925 Nelumbo nucifera HOM05D004106 ORTHO05D004381 1.9e-38 163.3 195 51.3
BcaC01g01145 Brassica carinata HOM05D004106 ORTHO05D004381 9.6e-38 161.0 149 60.4
Haze_19171 Corylus avellana HOM05D004106 ORTHO05D004381 1.6e-37 160.2 148 60.8
MELO3C010214.2 Cucumis melo HOM05D004106 ORTHO05D004381 1.6e-37 160.2 158 57.6
FAN20G0773 Fragaria x ananassa HOM05D004106 ORTHO05D004381 2.1e-37 159.8 187 52.9
Mapoly0031s0030 Marchantia polymorpha HOM05D004106 ORTHO05D004381 4.8e-37 158.7 174 50.6
CANSAT54G0776 Cannabis sativa HOM05D004106 ORTHO05D004381 1.1e-36 157.5 180 50.6
Sc09g0010670 Simmondsia chinensis HOM05D004106 ORTHO05D004381 2.4e-36 156.4 122 69.7
Pp3c2_35530 Physcomitrium patens HOM05D004106 ORTHO05D004381 1.2e-35 154.1 198 48.0
Pp3c1_1160 Physcomitrium patens HOM05D004106 ORTHO05D004381 1.5e-35 153.7 173 52.0
Aa31LG7G12810 Aethionema arabicum HOM05D004106 ORTHO05D004381 4.5e-35 152.1 198 51.0
SMO364G0386 Selaginella moellendorffii HOM05D004106 ORTHO05D004381 4.5e-35 152.1 144 58.3
Nitab4.5_0002891g0090 Nicotiana tabacum HOM05D004106 ORTHO05D004381 1.3e-34 150.6 199 48.2
Nitab4.5_0008875g0050 Nicotiana tabacum HOM05D004106 ORTHO05D004381 1.3e-34 150.6 199 48.2
Pp3c11_2360 Physcomitrium patens HOM05D004106 ORTHO05D004381 3.8e-34 149.1 177 48.6
Thecc.09G028700 Theobroma cacao HOM05D004106 ORTHO05D004381 8.4e-34 147.9 132 61.4
Hma1.2p1_2680F.1_g326820 Hydrangea macrophylla HOM05D004106 ORTHO05D004381 6.0e-32 141.7 191 49.7
Zm00001eb234060 Zea mays HOM05D004106 ORTHO05D004381 3.3e-30 136.0 176 46.6
CBR_g728 Chara braunii HOM05D004106 ORTHO05D004381 7.4e-30 134.8 146 52.7
CBR_g54183 Chara braunii HOM05D004106 ORTHO05D004381 9.6e-30 134.4 144 52.1
AagrBONN_evm.TU.Sc2ySwM_228.5744 Anthoceros agrestis HOM05D004106 ORTHO05D004381 3.7e-29 132.5 151 52.3
QL02p018811 Quercus lobata HOM05D004106 ORTHO05D004381 1.9e-25 120.2 96 67.7
Actinidia38669 Actinidia chinensis HOM05D004106 ORTHO05D004381 5.5e-25 118.6 96 68.8
Cre10.g458550 Chlamydomonas reinhardtii HOM05D004106 ORTHO05D004381 4.8e-21 105.5 175 39.4
Gohir.D07G031300 Gossypium hirsutum HOM05D004106 ORTHO05D004381 4.8e-21 105.5 71 73.2
PRCOL_00004350 Prasinoderma coloniale HOM05D004106 ORTHO05D004381 8.2e-21 104.8 143 42.7
C02p32810 Brassica napus HOM05D004106 ORTHO05D004381 1.4e-17 94.0 122 49.2
BraA02t07117Z Brassica rapa HOM05D004106 ORTHO05D004381 4.2e-17 92.4 127 48.0
BcaC03g15698 Brassica carinata HOM05D004106 ORTHO05D004381 9.4e-17 91.3 122 48.4
BolC2t09418H Brassica oleracea HOM05D004106 ORTHO05D004381 9.4e-17 91.3 122 48.4
BcaB05g25007 Brassica carinata HOM05D004106 ORTHO05D004381 1.6e-16 90.5 135 46.7
A02p20860 Brassica napus HOM05D004106 ORTHO05D004381 3.6e-16 89.4 121 47.1
Peaxi162Scf00387g00211 Petunia axillaris HOM05D004106 ORTHO05D004381 3.0e-15 86.3 134 45.5
SEGI_18679 Sequoiadendron giganteum HOM05D004106 ORTHO05D004381 4.1e-12 75.9 44 86.4
CARHR238490 Cardamine hirsuta HOM05D004106 ORTHO05D004381 9.4e-09 64.7 55 63.6
BcaB01g01386 Brassica carinata HOM05D004106 ORTHO05D005755 1.6e-08 63.9 43 76.7
Lsat_1_v5_gn_7_47460 Lactuca sativa HOM05D004106 ORTHO05D002137 3.6e-08 62.8 36 83.3


User provided reference genes

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