Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro05116 Vaccinium macrocarpon HOM05D007253 ORTHO05D009055 6.3e-89 330.9 181 100.0
Actinidia14140 Actinidia chinensis HOM05D007253 ORTHO05D009055 5.6e-37 158.3 193 57.5
CSS0046604 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 9.5e-37 157.5 195 56.9
CSS0050010 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 9.5e-37 157.5 195 56.9
CSS0024958 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 1.4e-35 153.7 199 54.3
CSS0026470 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 2.6e-34 149.4 165 60.0
Ciclev10009764m.g Citrus clementina HOM05D007253 ORTHO05D009055 1.1e-32 144.1 189 55.6
Potri.006G266800 Populus trichocarpa HOM05D007253 ORTHO05D009055 4.1e-32 142.1 184 57.6
Dinv03404 Davidia involucrata HOM05D007253 ORTHO05D009055 1.2e-31 140.6 192 54.2
Sc09g0010780 Simmondsia chinensis HOM05D007253 ORTHO05D009055 4.6e-31 138.7 182 54.4
Lsat_1_v5_gn_6_77860 Lactuca sativa HOM05D007253 ORTHO05D009055 3.9e-30 135.6 179 57.5
TWI63G1073 Tripterygium wilfordii HOM05D007253 ORTHO05D009055 5.0e-30 135.2 144 63.9
TAR626G1108 Trochodendron aralioides HOM05D007253 ORTHO05D009055 5.0e-30 135.2 180 54.4
COL.COLO4_18974 Corchorus olitorius HOM05D007253 ORTHO05D009055 1.9e-29 133.3 194 52.1
CANSAT35G1478 Cannabis sativa HOM05D007253 ORTHO05D009055 5.6e-29 131.7 196 50.5
Cpa.g.sc148.44 Carica papaya HOM05D007253 ORTHO05D009055 9.5e-29 131.0 187 54.5
MD15G1043300 Malus domestica HOM05D007253 ORTHO05D009055 1.2e-28 130.6 190 53.7
MELO3C016946.2 Cucumis melo HOM05D007253 ORTHO05D009055 1.6e-28 130.2 153 60.1
Nn8g40104 Nelumbo nucifera HOM05D007253 ORTHO05D009055 1.6e-28 130.2 177 53.1
HanXRQChr13g0413301 Helianthus annuus HOM05D007253 ORTHO05D009055 2.1e-28 129.8 187 50.3
Prupe.1G396700 Prunus persica HOM05D007253 ORTHO05D009055 2.8e-28 129.4 196 49.0
Duzib168G0559 Durio zibethinus HOM05D007253 ORTHO05D009055 3.6e-28 129.0 140 64.3
ECA240G1715 Erigeron canadensis HOM05D001941 ORTHO05D002198 3.6e-28 129.0 168 56.0
Eucgr.C04033 Eucalyptus grandis HOM05D007253 ORTHO05D009055 3.6e-28 129.0 139 64.7
Thhalv10000367m.g Eutrema salsugineum HOM05D007253 ORTHO05D009055 3.6e-28 129.0 135 64.4
Sp4g03910 Schrenkiella parvula HOM05D007253 ORTHO05D009055 3.6e-28 129.0 147 59.9
Cc08_g07700 Coffea canephora HOM05D007253 ORTHO05D009055 4.7e-28 128.6 138 63.0
FAN27G1409 Fragaria x ananassa HOM05D007253 ORTHO05D009055 6.2e-28 128.3 151 59.6
GSVIVG01035999001 Vitis vinifera HOM05D007253 ORTHO05D009055 6.2e-28 128.3 139 63.3
FvH4_2g41340 Fragaria vesca HOM05D007253 ORTHO05D009055 1.1e-27 127.5 151 59.6
BcaB06g28020 Brassica carinata HOM05D007253 ORTHO05D009055 1.4e-27 127.1 135 63.7
A04p19250 Brassica napus HOM05D007253 ORTHO05D009055 1.4e-27 127.1 135 63.7
BolC4t27019H Brassica oleracea HOM05D007253 ORTHO05D009055 1.4e-27 127.1 135 63.7
BraA04t17525Z Brassica rapa HOM05D007253 ORTHO05D009055 1.4e-27 127.1 135 63.7
Duzib187G0122 Durio zibethinus HOM05D007253 ORTHO05D009055 1.4e-27 127.1 194 49.5
SGA_v2.0_scaffold4G02163 Striga asiatica HOM05D007253 ORTHO05D009055 1.4e-27 127.1 180 52.2
Atru.chr7.2576 Acer truncatum HOM05D007253 ORTHO05D009055 1.8e-27 126.7 140 60.0
CiPaw.07G233200 Carya illinoinensis HOM05D007253 ORTHO05D009055 1.8e-27 126.7 189 53.4
RcHm_v2.0_Chr6g0299201 Rosa chinensis HOM05D007253 ORTHO05D009055 1.8e-27 126.7 159 57.9
CARHR116800 Cardamine hirsuta HOM05D007253 ORTHO05D009055 2.3e-27 126.3 142 60.6
Manes.03G007000 Manihot esculenta HOM05D007253 ORTHO05D009055 3.1e-27 125.9 136 64.7
Medtr3g105830 Medicago truncatula HOM05D007253 ORTHO05D009055 3.1e-27 125.9 180 51.7
PGR044G0212 Punica granatum HOM05D007253 ORTHO05D009055 3.1e-27 125.9 189 52.9
BcaC02g08395 Brassica carinata HOM05D007253 ORTHO05D009055 4.0e-27 125.6 135 63.0
C04p54740 Brassica napus HOM05D007253 ORTHO05D009055 4.0e-27 125.6 135 63.0
Thecc.09G013200 Theobroma cacao HOM05D007253 ORTHO05D009055 5.2e-27 125.2 140 62.1
Gohir.D05G063600 Gossypium hirsutum HOM05D007253 ORTHO05D009055 6.8e-27 124.8 140 60.7
Gorai.009G064300 Gossypium raimondii HOM05D007253 ORTHO05D009055 6.8e-27 124.8 140 61.4
ATR0580G321 Amborella trichopoda HOM05D007253 ORTHO05D009055 8.9e-27 124.4 155 58.1
Sed0002011 Sechium edule HOM05D007253 ORTHO05D009055 8.9e-27 124.4 149 57.7
ClCG05G016120 Citrullus lanatus HOM05D007253 ORTHO05D009055 2.0e-26 123.2 151 59.6
FAN15G3156 Fragaria x ananassa HOM05D007253 ORTHO05D009055 2.0e-26 123.2 151 57.6
Lj1g0002882 Lotus japonicus HOM05D007253 ORTHO05D009055 2.0e-26 123.2 151 55.6
Potri.018G016400 Populus trichocarpa HOM05D007253 ORTHO05D009055 2.0e-26 123.2 135 63.7
HPP92_010354 Vanilla planifolia HOM05D007253 ORTHO05D009055 2.0e-26 123.2 144 59.0
Aqoxy7G03301 Aquilegia oxysepala HOM05D007253 ORTHO05D009055 2.6e-26 122.9 144 47.9
SalBow8G5515 Salvia bowleyana HOM05D007253 ORTHO05D009055 2.6e-26 122.9 151 56.3
Oeu023241.1 Olea europaea HOM05D007253 ORTHO05D009055 4.4e-26 122.1 176 53.4
AL4G15950 Arabidopsis lyrata HOM05D007253 ORTHO05D009055 5.8e-26 121.7 135 60.7
AT2G24860 Arabidopsis thaliana HOM05D007253 ORTHO05D009055 5.8e-26 121.7 135 60.7
Glyma.04G059900 Glycine max HOM05D007253 ORTHO05D009055 9.8e-26 120.9 189 49.2
MD08G1052200 Malus domestica HOM05D007253 ORTHO05D009055 1.3e-25 120.6 156 46.8
Psat5g033080 Pisum sativum HOM05D007253 ORTHO05D009055 1.3e-25 120.6 143 56.6
Phvul.009G086100 Phaseolus vulgaris HOM05D007253 ORTHO05D009055 1.7e-25 120.2 179 50.3
MBI14_g31385_MAGBIO Magnolia biondii HOM05D007253 ORTHO05D009055 2.2e-25 119.8 182 52.2
Aa31LG7G11560 Aethionema arabicum HOM05D007253 ORTHO05D009055 2.9e-25 119.4 135 60.0
Carub.0004s0449 Capsella rubella HOM05D007253 ORTHO05D009055 3.7e-25 119.0 141 57.4
EL10Ac2g02465 Beta vulgaris HOM05D007253 ORTHO05D009055 6.4e-25 118.2 185 49.2
PSO063G6023 Papaver somniferum HOM05D007253 ORTHO05D009055 6.4e-25 118.2 161 54.0
TPR.G1881 Trifolium pratense HOM05D007253 ORTHO05D009055 6.4e-25 118.2 143 57.3
Ah.00g238170 Amaranthus hybridus HOM05D007253 ORTHO05D009055 8.3e-25 117.9 141 56.7
Ah.12g060580 Amaranthus hybridus HOM05D007253 ORTHO05D009055 8.3e-25 117.9 180 48.9
DCAR_000661 Daucus carota HOM05D007253 ORTHO05D009055 8.3e-25 117.9 138 60.9
Migut.E01444 Erythranthe guttata HOM05D007253 ORTHO05D009055 8.3e-25 117.9 177 51.4
Nitab4.5_0000264g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 8.3e-25 117.9 135 60.7
Nitab4.5_0005450g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 1.1e-24 117.5 179 49.7
MSTRG.13960 Avicennia marina HOM05D007253 ORTHO05D009055 4.1e-24 115.5 171 52.0
Glyma.06G060300 Glycine max HOM05D007253 ORTHO05D009055 4.1e-24 115.5 179 50.3
PSO782G0429 Papaver somniferum HOM05D007253 ORTHO05D009055 5.4e-24 115.2 162 53.1
THA.LOC104803610 Tarenaya hassleriana HOM05D007253 ORTHO05D009055 7.0e-24 114.8 179 48.0
arahy.Tifrunner.gnm1.ann1.LF5WZD Arachis hypogaea HOM05D007253 ORTHO05D009055 1.2e-23 114.0 138 59.4
Os09g0423700 Oryza sativa ssp. japonica HOM05D007253 ORTHO05D009055 1.6e-23 113.6 136 56.6
CAN.G285.13 Capsicum annuum HOM05D007253 ORTHO05D009055 2.1e-23 113.2 182 49.5
CDE05G3047 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 2.7e-23 112.8 133 61.7
Glyma.17G221800 Glycine max HOM05D007253 ORTHO05D009055 2.7e-23 112.8 145 56.6
Hund25608 Selenicereus undatus HOM05D007253 ORTHO05D009055 2.7e-23 112.8 189 45.0
TAR383G0216 Trochodendron aralioides HOM05D007253 ORTHO05D009055 1.0e-22 110.9 76 89.5
arahy.Tifrunner.gnm1.ann1.G7TND8 Arachis hypogaea HOM05D007253 ORTHO05D009055 1.3e-22 110.5 138 57.2
Solyc08g006620.3 Solanum lycopersicum HOM05D007253 ORTHO05D009055 1.7e-22 110.2 143 55.9
Sopen08g002570 Solanum pennellii HOM05D007253 ORTHO05D009055 1.7e-22 110.2 143 55.9
arahy.Tifrunner.gnm1.ann1.2K72KI Arachis hypogaea HOM05D007253 ORTHO05D009055 3.0e-22 109.4 138 56.5
Peaxi162Scf00045g01937 Petunia axillaris HOM05D007253 ORTHO05D009055 3.0e-22 109.4 78 85.9
Glyma.14G104200 Glycine max HOM05D007253 ORTHO05D009055 3.9e-22 109.0 145 55.2
Lalb_Chr23g0268151 Lupinus albus HOM05D007253 ORTHO05D009055 3.3e-21 105.9 140 54.3
PGSC0003DMG400026305 Solanum tuberosum HOM05D005612 ORTHO05D007014 7.3e-21 104.8 91 73.6
SEGI_37228 Sequoiadendron giganteum HOM05D007253 ORTHO05D009055 2.8e-20 102.8 77 81.8
CDE02G4354 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 1.8e-19 100.1 129 58.1
AUR62032436 Chenopodium quinoa HOM05D007253 ORTHO05D009055 4.0e-19 99.0 81 76.5
Zm00001eb313320 Zea mays HOM05D007253 ORTHO05D009055 5.2e-19 98.6 102 48.0
unitig_32.g11120 Utricularia gibba HOM05D007253 ORTHO05D009055 3.4e-18 95.9 133 54.1
Rhsim07G0166900 Rhododendron simsii HOM05D018710 ORTHO05D023780 5.8e-18 95.1 70 71.4
AagrBONN_evm.TU.Sc2ySwM_117.2542 Anthoceros agrestis HOM05D007253 ORTHO05D009055 2.9e-17 92.8 128 53.1
Pp3c6_11160 Physcomitrium patens HOM05D007253 ORTHO05D009055 4.9e-17 92.0 126 52.4
Mapoly0121s0030 Marchantia polymorpha HOM05D007253 ORTHO05D009055 6.0e-15 85.1 71 74.6
SMO196G0205 Selaginella moellendorffii HOM05D007253 ORTHO05D009055 1.1e-13 80.9 72 70.8


User provided reference genes

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