Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro05047 Vaccinium macrocarpon HOM05D006706 ORTHO05D008794 3.0e-102 375.2 187 100.0
Rhsim07G0178100 Rhododendron simsii HOM05D006706 ORTHO05D008794 3.8e-73 278.5 189 75.7
CSS0022194 Camellia sinensis var. sinensis HOM05D006706 ORTHO05D008794 7.5e-61 237.7 162 72.8
Actinidia22256 Actinidia chinensis HOM05D006706 ORTHO05D008794 1.7e-60 236.5 163 74.8
Potri.018G008000 Populus trichocarpa HOM05D006706 ORTHO05D008794 3.5e-58 228.8 194 64.4
Manes.03G004300 Manihot esculenta HOM05D006706 ORTHO05D008794 7.7e-58 227.6 119 90.8
PSO063G0792 Papaver somniferum HOM05D006706 ORTHO05D008794 1.0e-57 227.3 191 65.4
PSO170G0804 Papaver somniferum HOM05D006706 ORTHO05D008794 1.3e-57 226.9 136 78.7
Duzib187G1270 Durio zibethinus HOM05D006706 ORTHO05D008794 1.7e-57 226.5 173 67.6
Thecc.09G008100 Theobroma cacao HOM05D006706 ORTHO05D008794 5.0e-57 224.9 203 61.6
CANSAT78G2093 Cannabis sativa HOM05D006706 ORTHO05D008794 6.5e-57 224.6 143 76.9
Lj1g0012669 Lotus japonicus HOM05D006706 ORTHO05D008794 1.1e-56 223.8 198 62.1
Cfa013279 Carpinus fangiana HOM05D006706 ORTHO05D008794 3.2e-56 222.2 169 68.6
TWI34G0378 Tripterygium wilfordii HOM05D006706 ORTHO05D008794 3.2e-56 222.2 187 63.6
HanXRQChr17g0538031 Helianthus annuus HOM05D006706 ORTHO05D008794 4.2e-56 221.9 136 80.1
QL12p025335 Quercus lobata HOM05D006706 ORTHO05D008794 4.2e-56 221.9 159 69.8
COL.COLO4_19024 Corchorus olitorius HOM05D006706 ORTHO05D008794 5.5e-56 221.5 134 79.1
Cpa.g.sc23.24 Carica papaya HOM05D006706 ORTHO05D008794 7.2e-56 221.1 119 87.4
Haze_21752 Corylus avellana HOM05D006706 ORTHO05D008794 7.2e-56 221.1 136 80.9
Dinv26561 Davidia involucrata HOM05D006706 ORTHO05D008794 7.2e-56 221.1 184 63.6
Prupe.1G459500 Prunus persica HOM05D006706 ORTHO05D008794 7.2e-56 221.1 192 63.5
Sabra18G0015100 Salix brachista HOM05D006706 ORTHO05D008794 7.2e-56 221.1 159 71.1
Atru.chr7.2653 Acer truncatum HOM05D006706 ORTHO05D008794 9.4e-56 220.7 119 87.4
VMungo1309G0608 Vigna mungo HOM05D006706 ORTHO05D008794 1.6e-55 219.9 180 63.9
arahy.Tifrunner.gnm1.ann1.G0PQAF Arachis hypogaea HOM05D006706 ORTHO05D008794 3.6e-55 218.8 192 61.5
ECA246G3311 Erigeron canadensis HOM05D006706 ORTHO05D008794 3.6e-55 218.8 138 75.4
Peaxi162Scf00459g00840 Petunia axillaris HOM05D006706 ORTHO05D008794 3.6e-55 218.8 179 63.7
Haze_21755 Corylus avellana HOM05D006706 ORTHO05D008794 4.7e-55 218.4 169 68.0
Glyma.04G075900 Glycine max HOM05D006706 ORTHO05D008794 4.7e-55 218.4 118 88.1
THA.LOC104814973 Tarenaya hassleriana HOM05D006706 ORTHO05D008794 4.7e-55 218.4 193 61.7
Lj7C748T8 Lonicera japonica HOM05D006706 ORTHO05D008794 6.1e-55 218.0 194 60.8
Phvul.009G101700 Phaseolus vulgaris HOM05D006706 ORTHO05D008794 6.1e-55 218.0 197 61.4
Lsat_1_v5_gn_3_19441 Lactuca sativa HOM05D006706 ORTHO05D008794 1.0e-54 217.2 137 77.4
Psat0s1809g0040 Pisum sativum HOM05D006706 ORTHO05D008794 1.0e-54 217.2 189 63.0
arahy.Tifrunner.gnm1.ann1.92NGGW Arachis hypogaea HOM05D006706 ORTHO05D008794 1.4e-54 216.9 133 76.7
Ca_15656_v3 Cicer arietinum L. HOM05D006706 ORTHO05D008794 1.4e-54 216.9 118 85.6
Ca_15664_v3 Cicer arietinum L. HOM05D006706 ORTHO05D008794 1.4e-54 216.9 118 85.6
Glyma.06G077100 Glycine max HOM05D006706 ORTHO05D008794 1.4e-54 216.9 159 70.4
Ciclev10009845m.g Citrus clementina HOM05D006706 ORTHO05D008794 1.8e-54 216.5 118 86.4
Lalb_Chr23g0269141 Lupinus albus HOM05D006706 ORTHO05D008794 1.8e-54 216.5 167 67.1
Solyc12g096390.2 Solanum lycopersicum HOM05D006706 ORTHO05D008794 1.8e-54 216.5 118 86.4
Sopen12g032240 Solanum pennellii HOM05D006706 ORTHO05D008794 1.8e-54 216.5 118 86.4
CDE02G4751 Ceratophyllum demersum HOM05D006706 ORTHO05D008794 2.3e-54 216.1 119 84.9
Gorai.010G122100 Gossypium raimondii HOM05D006706 ORTHO05D008794 2.3e-54 216.1 149 71.8
Eucgr.C04010 Eucalyptus grandis HOM05D006706 ORTHO05D008794 3.0e-54 215.7 132 78.8
FvH4_2g36680 Fragaria vesca HOM05D006706 ORTHO05D008794 3.0e-54 215.7 194 61.3
TPR.G12362 Trifolium pratense HOM05D006706 ORTHO05D008794 3.0e-54 215.7 175 62.9
GSVIVG01035513001 Vitis vinifera HOM05D006706 ORTHO05D008794 3.0e-54 215.7 179 62.6
CiPaw.08G020300 Carya illinoinensis HOM05D006706 ORTHO05D008794 5.2e-54 214.9 124 82.3
DCAR_006314 Daucus carota HOM05D006706 ORTHO05D008794 5.2e-54 214.9 133 76.7
Duzib168G0001 Durio zibethinus HOM05D006706 ORTHO05D008794 5.2e-54 214.9 174 66.7
Nitab4.5_0010092g0010 Nicotiana tabacum HOM05D006706 ORTHO05D008794 6.8e-54 214.5 118 84.7
PGSC0003DMG400029370 Solanum tuberosum HOM05D006706 ORTHO05D008794 8.8e-54 214.2 118 84.7
RcHm_v2.0_Chr1g0366021 Rosa chinensis HOM05D006706 ORTHO05D008794 1.5e-53 213.4 162 69.1
Nitab4.5_0001159g0140 Nicotiana tabacum HOM05D006706 ORTHO05D008794 2.0e-53 213.0 118 84.7
CAN.G566.65 Capsicum annuum HOM05D006706 ORTHO05D008794 2.6e-53 212.6 118 84.7
CsaV3_2G031370 Cucumis sativus L. HOM05D006706 ORTHO05D008794 2.6e-53 212.6 118 84.7
FAN27G0070 Fragaria x ananassa HOM05D006706 ORTHO05D008794 2.6e-53 212.6 188 62.2
AUR62020287 Chenopodium quinoa HOM05D006706 ORTHO05D008794 3.4e-53 212.2 135 77.0
Thhalv10014763m.g Eutrema salsugineum HOM05D006706 ORTHO05D008794 3.4e-53 212.2 139 74.8
Migut.A00436 Erythranthe guttata HOM05D006706 ORTHO05D008794 4.4e-53 211.8 173 60.7
MD08G1127800 Malus domestica HOM05D006706 ORTHO05D008794 4.4e-53 211.8 170 67.6
Medtr3g108900 Medicago truncatula HOM05D006706 ORTHO05D008794 4.4e-53 211.8 118 83.9
Oeu018568.1 Olea europaea HOM05D006706 ORTHO05D008794 5.7e-53 211.5 142 73.9
FAN20G0608 Fragaria x ananassa HOM05D006706 ORTHO05D008794 7.5e-53 211.1 188 61.7
MBI14_g10732_MAGBIO Magnolia biondii HOM05D006706 ORTHO05D008794 9.8e-53 210.7 161 68.9
SalBow4G1165 Salvia bowleyana HOM05D006706 ORTHO05D008794 1.3e-52 210.3 119 82.4
Sed0007748 Sechium edule HOM05D006706 ORTHO05D008794 1.7e-52 209.9 118 83.9
Hund07113 Selenicereus undatus HOM05D006706 ORTHO05D008794 2.8e-52 209.1 118 83.9
Aqoxy7G02908 Aquilegia oxysepala HOM05D006706 ORTHO05D008794 3.7e-52 208.8 119 84.0
AT5G10700 Arabidopsis thaliana HOM05D006706 ORTHO05D008794 6.3e-52 208.0 180 61.1
MELO3C011186.2 Cucumis melo HOM05D006706 ORTHO05D008794 6.3e-52 208.0 198 59.6
AL6G21240 Arabidopsis lyrata HOM05D006706 ORTHO05D008794 1.4e-51 206.8 186 60.8
CARHR202620 Cardamine hirsuta HOM05D006706 ORTHO05D008794 1.8e-51 206.5 132 76.5
Sp6g32760 Schrenkiella parvula HOM05D006706 ORTHO05D008794 1.8e-51 206.5 119 81.5
A03p04700 Brassica napus HOM05D006706 ORTHO05D008794 2.4e-51 206.1 119 81.5
Nn3g19671 Nelumbo nucifera HOM05D006706 ORTHO05D008794 2.4e-51 206.1 151 67.5
RcHm_v2.0_Chr6g0305051 Rosa chinensis HOM05D006706 ORTHO05D008794 2.4e-51 206.1 159 67.9
BraA03t09810Z Brassica rapa HOM05D006706 ORTHO05D008794 3.1e-51 205.7 119 81.5
CiPaw.07G211900 Carya illinoinensis HOM05D006706 ORTHO05D008794 3.1e-51 205.7 115 85.2
Carub.0006s0917 Capsella rubella HOM05D006706 ORTHO05D008794 4.1e-51 205.3 134 75.4
Aa31LG3G16430 Aethionema arabicum HOM05D006706 ORTHO05D008794 5.4e-51 204.9 189 58.7
BcaB01g06271 Brassica carinata HOM05D006706 ORTHO05D008794 5.4e-51 204.9 119 81.5
BcaC04g19291 Brassica carinata HOM05D006706 ORTHO05D008794 5.4e-51 204.9 119 81.5
BcaB01g05507 Brassica carinata HOM05D006706 ORTHO05D008794 1.2e-50 203.8 119 79.8
C03p05410 Brassica napus HOM05D006706 ORTHO05D008794 1.2e-50 203.8 119 79.8
PGR044G2738 Punica granatum HOM05D006706 ORTHO05D008794 2.0e-50 203.0 197 56.9
MSTRG.25780 Avicennia marina HOM05D006706 ORTHO05D008794 2.7e-50 202.6 159 65.4
SEGI_18071 Sequoiadendron giganteum HOM05D006706 ORTHO05D008794 1.5e-48 196.8 119 74.8
ATR0580G320 Amborella trichopoda HOM05D006706 ORTHO05D008794 9.4e-48 194.1 128 73.4
AUR62037716 Chenopodium quinoa HOM05D006706 ORTHO05D008794 3.6e-47 192.2 122 75.4
Zm00001eb071580 Zea mays HOM05D006706 ORTHO05D008794 4.7e-47 191.8 156 61.5
Os04g0605200 Oryza sativa ssp. japonica HOM05D006706 ORTHO05D008794 1.4e-46 190.3 120 73.3
HPP92_021967 Vanilla planifolia HOM05D006706 ORTHO05D008794 5.2e-46 188.3 133 69.2
Pp3c18_3890 Physcomitrium patens HOM05D006706 ORTHO05D008794 8.8e-46 187.6 160 58.1
HPP92_021941 Vanilla planifolia HOM05D006706 ORTHO05D008794 2.0e-45 186.4 133 68.4
AagrBONN_evm.TU.Sc2ySwM_228.645 Anthoceros agrestis HOM05D000036 ORTHO05D038461 2.2e-44 183.0 141 62.4
SGA_v2.0_scaffold193G40663 Striga asiatica HOM05D006706 ORTHO05D008794 6.3e-44 181.4 160 60.0
SMO203G0167 Selaginella moellendorffii HOM05D006706 ORTHO05D008794 4.5e-42 175.3 132 64.4
ClCG08G012660 Citrullus lanatus HOM05D006706 ORTHO05D008794 5.9e-42 174.9 131 66.4
Ah.10g024780 Amaranthus hybridus HOM05D006706 ORTHO05D008794 5.6e-40 168.3 117 69.2
MD15G1107200 Malus domestica HOM05D006706 ORTHO05D008794 3.6e-39 165.6 199 50.8
Mapoly0013s0161 Marchantia polymorpha HOM05D006706 ORTHO05D008794 1.0e-38 164.1 144 54.9
unitig_21.g20325 Utricularia gibba HOM05D006706 ORTHO05D008794 7.5e-37 157.9 150 56.7
CBR_g3167 Chara braunii HOM05D006706 ORTHO05D008794 3.2e-35 152.5 131 58.0
Cre10.g449350 Chlamydomonas reinhardtii HOM05D006706 ORTHO05D008794 2.0e-34 149.8 131 55.7
MCO07G367 Micromonas commoda HOM05D006706 ORTHO05D008794 1.5e-32 143.7 131 55.7
EL10Ac2g02413 Beta vulgaris HOM05D006706 ORTHO05D008794 1.1e-22 110.9 61 86.9
Gohir.A06G105300 Gossypium hirsutum HOM05D006706 ORTHO05D008794 3.1e-22 109.4 88 61.4
Sc06g0000170 Simmondsia chinensis HOM05D006706 ORTHO05D008794 8.9e-22 107.8 59 81.4
Gohir.D06G107400 Gossypium hirsutum HOM05D006706 ORTHO05D008794 1.2e-21 107.5 76 67.1
TAR636G3689 Trochodendron aralioides HOM05D006706 ORTHO05D008794 1.2e-21 107.5 87 60.9
PRCOL_00004161 Prasinoderma coloniale HOM05D006706 ORTHO05D008794 1.3e-20 104.0 133 46.6
Haze_27087 Corylus avellana HOM05D006706 ORTHO05D008794 1.6e-18 97.1 116 44.0
CDE06G2578 Ceratophyllum demersum HOM05D006706 ORTHO05D008794 2.5e-16 89.7 61 65.6
A10p26910 Brassica napus HOM05D006706 ORTHO05D028018 2.7e-10 69.7 35 91.4
Sed0005624 Sechium edule HOM05D006706 ORTHO05D373521 1.8e-06 57.0 60 46.7


User provided reference genes

Program Settings