Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro05012 Vaccinium macrocarpon HOM05D006774 ORTHO05D008411 2.4e-42 175.3 100 100.0
vmacro23280 Vaccinium macrocarpon HOM05D006774 ORTHO05D008411 5.4e-42 174.1 100 99.0
RhsimUnG0226800 Rhododendron simsii HOM05D006774 ORTHO05D008411 1.8e-16 89.4 89 71.9
MBI04_g29615_MAGBIO Magnolia biondii HOM05D006774 ORTHO05D008411 3.9e-16 88.2 94 52.1
Cpa.g.sc48.60 Carica papaya HOM05D006774 ORTHO05D008411 1.5e-15 86.3 88 62.5
CSS0019331 Camellia sinensis var. sinensis HOM05D006774 ORTHO05D008411 2.5e-15 85.5 88 70.5
TWI56G0431 Tripterygium wilfordii HOM05D006774 ORTHO05D008411 5.6e-15 84.3 96 49.0
CSS0005750 Camellia sinensis var. sinensis HOM05D006774 ORTHO05D008411 7.4e-15 84.0 86 70.9
Potri.013G021500 Populus trichocarpa HOM05D006774 ORTHO05D008411 8.1e-14 80.5 86 61.6
GSVIVG01000080001 Vitis vinifera HOM05D006774 ORTHO05D008411 1.1e-13 80.1 89 55.1
Cc02_g33360 Coffea canephora HOM05D006774 ORTHO05D008411 3.1e-13 78.6 84 60.7
TAR633G1323 Trochodendron aralioides HOM05D006774 ORTHO05D008411 3.1e-13 78.6 89 60.7
Nitab4.5_0005541g0040 Nicotiana tabacum HOM05D006774 ORTHO05D008411 4.0e-13 78.2 85 65.9
TWI12G1162 Tripterygium wilfordii HOM05D006774 ORTHO05D008411 3.4e-12 75.1 89 60.7
Duzib177G0798 Durio zibethinus HOM05D006774 ORTHO05D008411 5.8e-12 74.3 89 58.4
EL10Ac4g09357 Beta vulgaris HOM05D006774 ORTHO05D008411 1.3e-11 73.2 84 56.0
QL03p007112 Quercus lobata HOM05D006774 ORTHO05D008411 1.3e-11 73.2 86 59.3
Peaxi162Scf00037g00517 Petunia axillaris HOM05D006774 ORTHO05D008411 2.2e-11 72.4 85 62.4
Manes.09G167600 Manihot esculenta HOM05D006774 ORTHO05D008411 2.9e-11 72.0 90 55.6
Nitab4.5_0000137g0150 Nicotiana tabacum HOM05D006774 ORTHO05D008411 3.8e-11 71.6 81 66.7
CAN.G1034.42 Capsicum annuum HOM05D006774 ORTHO05D008411 4.9e-11 71.2 86 64.0
Ciclev10001021m.g Citrus clementina HOM05D006774 ORTHO05D008411 4.9e-11 71.2 88 59.1
Prupe.6G324900 Prunus persica HOM05D006774 ORTHO05D008411 8.4e-11 70.5 88 56.8
Atru.chr2.394 Acer truncatum HOM05D006774 ORTHO05D008411 1.1e-10 70.1 86 51.2
CiPaw.10G139100 Carya illinoinensis HOM05D006774 ORTHO05D008411 1.1e-10 70.1 89 44.9
MD12G1218600 Malus domestica HOM05D006774 ORTHO05D008411 1.4e-10 69.7 84 53.6
Cfa006593 Carpinus fangiana HOM05D006774 ORTHO05D008411 1.9e-10 69.3 86 59.3
Thecc.05G302500 Theobroma cacao HOM05D006774 ORTHO05D008411 2.5e-10 68.9 88 56.8
MD04G1204900 Malus domestica HOM05D006774 ORTHO05D008411 4.2e-10 68.2 91 52.7
Oeu051834.1 Olea europaea HOM05D006774 ORTHO05D008411 7.1e-10 67.4 84 59.5
Gohir.A13G107700 Gossypium hirsutum HOM05D006774 ORTHO05D008411 9.3e-10 67.0 84 57.1
PGSC0003DMG400024686 Solanum tuberosum HOM05D006774 ORTHO05D008411 1.2e-09 66.6 85 61.2
THA.LOC104805877 Tarenaya hassleriana HOM05D006774 ORTHO05D008411 1.2e-09 66.6 89 50.6
Sc09g0003160 Simmondsia chinensis HOM05D006774 ORTHO05D008411 1.6e-09 66.2 85 51.8
Medtr7g113420 Medicago truncatula HOM05D006774 ORTHO05D008411 2.1e-09 65.9 90 44.4
Ah.06g189400 Amaranthus hybridus HOM05D006774 ORTHO05D008411 3.5e-09 65.1 84 41.7
ATR0332G083 Amborella trichopoda HOM05D006774 ORTHO05D008411 3.5e-09 65.1 85 42.4
Gohir.D13G110900 Gossypium hirsutum HOM05D006774 ORTHO05D008411 3.5e-09 65.1 84 56.0
Eucgr.C01256 Eucalyptus grandis HOM05D006774 ORTHO05D008411 1.3e-08 63.2 89 51.7
Solyc01g099120.4 Solanum lycopersicum HOM05D006774 ORTHO05D008411 2.3e-08 62.4 85 58.8
Gorai.013G124300 Gossypium raimondii HOM05D006774 ORTHO05D008411 3.0e-08 62.0 84 53.6
Sopen01g042680 Solanum pennellii HOM05D006774 ORTHO05D008411 3.0e-08 62.0 85 58.8
arahy.Tifrunner.gnm1.ann1.ST8CS6 Arachis hypogaea HOM05D006774 ORTHO05D008411 3.9e-08 61.6 85 42.4
arahy.Tifrunner.gnm1.ann1.V1E923 Arachis hypogaea HOM05D006774 ORTHO05D008411 3.9e-08 61.6 85 49.4
CANSAT54G0432 Cannabis sativa HOM05D006774 ORTHO05D008411 3.9e-08 61.6 92 46.7
ClCG03G016980 Citrullus lanatus HOM05D006774 ORTHO05D008411 3.9e-08 61.6 87 57.5
PGR031G3046 Punica granatum HOM05D006774 ORTHO05D008411 3.9e-08 61.6 89 50.6
Hund07075 Selenicereus undatus HOM05D006774 ORTHO05D008411 3.9e-08 61.6 87 54.0
Migut.N02011 Erythranthe guttata HOM05D006774 ORTHO05D008411 6.7e-08 60.8 88 50.0
MSTRG.20428 Avicennia marina HOM05D006774 ORTHO05D008411 8.7e-08 60.5 85 38.8
FAN02G0725 Fragaria x ananassa HOM05D006774 ORTHO05D008411 1.1e-07 60.1 86 48.8
CARHR284430 Cardamine hirsuta HOM05D006774 ORTHO05D008411 1.9e-07 59.3 87 39.1
Glyma.19G235000 Glycine max HOM05D006774 ORTHO05D008411 1.9e-07 59.3 85 47.1
SpUn0004_0080 Schrenkiella parvula HOM05D006774 ORTHO05D008411 1.9e-07 59.3 87 40.2
SpUn0066_0030 Schrenkiella parvula HOM05D006774 ORTHO05D008411 1.9e-07 59.3 87 40.2
Phvul.006G091800 Phaseolus vulgaris HOM05D006774 ORTHO05D008411 5.7e-07 57.8 54 51.9
Carub.0002s0819 Capsella rubella HOM05D006774 ORTHO05D008411 7.4e-07 57.4 86 39.5
Glyma.03G237400 Glycine max HOM05D006774 ORTHO05D008411 7.4e-07 57.4 85 44.7
PSO478G4979 Papaver somniferum HOM05D006774 ORTHO05D008411 7.4e-07 57.4 87 52.9
ECA236G1211 Erigeron canadensis HOM05D000208 ORTHO05D000130 9.6e-07 57.0 85 48.2
Aqoxy5G00494 Aquilegia oxysepala HOM05D006774 ORTHO05D008411 1.6e-06 56.2 88 48.9
PSO782G5565 Papaver somniferum HOM05D006774 ORTHO05D008411 1.6e-06 56.2 87 49.4
TPR.G33221 Trifolium pratense HOM05D006774 ORTHO05D008411 1.6e-06 56.2 91 40.7
Thhalv10023440m.g Eutrema salsugineum HOM05D006774 ORTHO05D008411 2.1e-06 55.8 86 38.4
VMungo0540G2441 Vigna mungo HOM05D006774 ORTHO05D008411 2.1e-06 55.8 46 56.5
Lalb_Chr18g0045661 Lupinus albus HOM05D006774 ORTHO05D008411 2.8e-06 55.5 90 42.2
MELO3C015322.2 Cucumis melo HOM05D006774 ORTHO05D008411 3.7e-06 55.1 83 54.2


User provided reference genes

Program Settings